{ "_id": "6a196e85acfb0bcc41debbd5", "Package": "a4Reporting", "Type": "Package", "Title": "Automated Affymetrix Array Analysis Reporting Package", "Version": "1.61.0", "Date": "2020-10-15", "Authors@R": "c(\nperson(given = \"Tobias\", family = \"Verbeke\", role = \"aut\", email = \"tobias.verbeke@openanalytics.eu\"),\nperson(given = \"Laure\", family = \"Cougnaud\", role = \"cre\", email = \"laure.cougnaud@openanalytics.eu\")\n)", "Description": "Utility functions to facilitate the reporting of the\nAutomated Affymetrix Array Analysis Reporting set of packages.", "biocViews": "Microarray", "License": "GPL-3", "VignetteBuilder": "knitr", "RoxygenNote": "7.1.1", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:35:24 UTC", "RemoteUrl": "https://github.com/bioc/a4Reporting", "RemoteRef": "HEAD", "RemoteSha": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-29 08:46:23 UTC", "User": "root" }, "Author": "Tobias Verbeke [aut],\nLaure Cougnaud [cre]", "Maintainer": "Laure Cougnaud ", "MD5sum": "885bf0e863023b9c87437a77577485c6", "_user": "bioc", "_type": "src", "_file": "a4Reporting_1.61.0.tar.gz", "_fileid": "4f6286ecd6d568d97216abb1735848a962d34ee3d746bdbc44377491689ba617", "_filesize": 120230, "_sha256": "4f6286ecd6d568d97216abb1735848a962d34ee3d746bdbc44377491689ba617", "_created": "2026-05-29T08:46:23.000Z", "_published": "2026-05-29T10:46:29.135Z", "_jobs": [ { "job": 78468206349, "time": 131, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7286783595" }, { "job": 78468206328, "time": 138, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7286785886" }, { "job": 78468206367, "time": 155, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7286791651" }, { "job": 78468206333, "time": 67, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7288873668" }, { "job": 78468206316, "time": 86, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7288874244" }, { "job": 78467857681, "time": 134, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7286743800" }, { "job": 78468206408, "time": 100, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7286774604" }, { "job": 78468206348, "time": 84, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7286769851" }, { "job": 78468206350, "time": 72, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7286766308" }, { "job": 78468206322, "time": 63, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7286763951" } ], "_bioccheck": { "error": 1, "warning": 2, "note": 7 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/a4Reporting", "_commit": { "id": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777379724 }, "_maintainer": { "name": "Laure Cougnaud", "email": "laure.cougnaud@openanalytics.eu", "login": "lcougnaud", "description": "", "uuid": 15339154 }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "methods", "role": "Imports" }, { "package": "xtable", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.61.0", "bioc": "3.24" }, { "branch": "release", "version": "1.60.0", "bioc": "3.23" } ], "_topics": [ "microarray" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 500, "source": "https://www.bioconductor.org/packages/stats/bioc/a4Reporting" }, "_searchresults": 3, "_rbuild": "4.6.0", "_assets": [ "extra/a4Reporting.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "manual.pdf" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "annotationTable", "generateEntrezIdLinks", "generateGOIdLinks", "xtable" ], "_help": [ { "page": "annotationTable", "title": "Function to Create an annotationTable", "topics": [ "annotationTable" ] }, { "page": "annotationTable-class", "title": "Class 'annotationTable'", "topics": [ "annotationTable-class", "show,annotationTable-method" ] }, { "page": "generateEntrezIdLinks", "title": "Transform an ENTREZ ID into a hyperlink", "topics": [ "generateEntrezIdLinks" ] }, { "page": "generateGOIdLinks", "title": "Transform a GO ID into a hyperlink", "topics": [ "generateGOIdLinks" ] }, { "page": "print.xtableAnnotationTable", "title": "Print method for 'xtableAnnotationTable' objects", "topics": [ "print.xtableAnnotationTable" ] }, { "page": "xtable-methods", "title": "Methods for Function xtable in Package `annotationTable'", "topics": [ "xtable,annotationTable,ANY,ANY,ANY,ANY,ANY-method", "xtable,annotationTable,ANY,ANY,ANY,numeric,ANY-method", "xtable,annotationTable,missing,missing,missing,missing,missing-method", "xtable-methods", "xtable.pamClassConfusionTable", "xtable.topTableElnet", "xtable.topTableGlmnet", "xtable.topTableLognet", "xtable.topTablePam", "xtable.topTableRfClass" ] } ], "_rundeps": [ "xtable" ], "_vignettes": [ { "source": "a4reporting-vignette.Rmd", "filename": "a4reporting-vignette.html", "title": "Vignette of the a4Reporting package", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Create an annotation table", "Top table of classification objects", "Appendix", "Session information" ], "created": "2020-10-15 11:36:24", "modified": "2020-10-15 11:36:24", "commits": 1 } ], "_score": 3.778151250383644, "_indexed": true, "_nocasepkg": "a4reporting", "_universes": [ "bioc", "lcougnaud" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.61.0", "date": "2026-05-29T08:48:40.000Z", "distro": "noble", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "9d243874430939c51c24199c710c2b9b5ee635efaa63f94a1b088f00adc77d5e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" }, { "r": "4.6.0", "os": "linux", "version": "1.61.0", "date": "2026-05-29T08:49:00.000Z", "distro": "noble", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "7172f666d1c718e6cf4105958fe1167526be986a7c0a9f48ee6283fe0b4c0189", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" }, { "r": "4.5.3", "os": "mac", "version": "1.61.0", "date": "2026-05-29T10:46:05.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "ee85d5e0f052bc310ad6f53e3b8abdd01dfbec501fac213f2c2c14d07db93411", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" }, { "r": "4.6.0", "os": "mac", "version": "1.61.0", "date": "2026-05-29T10:46:04.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "9ff5f85e72f84a9617298c873822d9f8629b4654692e89288d65fb210bf5ec8b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" }, { "r": "4.6.0", "os": "wasm", "version": "1.61.0", "date": "2026-05-29T08:48:15.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "f4072b40c0d668557acdcf0fb6f00ffe84d7e11a2f5409059959e31fe2a88536", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" }, { "r": "4.7.0", "os": "win", "version": "1.61.0", "date": "2026-05-29T08:47:42.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "35143a1c88614b2d196a5e432bedef21c92f7355298669775f122db636d0634f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" }, { "r": "4.5.3", "os": "win", "version": "1.61.0", "date": "2026-05-29T08:47:33.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "01a63ef21794ca823899c3878c8833750535081e2eaadf10ee26b3ddefa2cfe3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" }, { "r": "4.6.0", "os": "win", "version": "1.61.0", "date": "2026-05-29T08:47:23.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "79901484f16bd3fb9a4322dadf029f56fa795774ab3b59aee0ac184598493114", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627523237" } ] }