{ "_id": "6ab230c23d719c1f8408a0f9", "Package": "a4Reporting", "Type": "Package", "Title": "Automated Affymetrix Array Analysis Reporting Package", "Version": "1.61.0", "Date": "2020-10-15", "Authors@R": "c(\nperson(given = \"Tobias\", family = \"Verbeke\", role = \"aut\", email = \"tobias.verbeke@openanalytics.eu\"),\nperson(given = \"Laure\", family = \"Cougnaud\", role = \"cre\", email = \"laure.cougnaud@openanalytics.eu\")\n)", "Description": "Utility functions to facilitate the reporting of the\nAutomated Affymetrix Array Analysis Reporting set of packages.", "biocViews": "Microarray", "License": "GPL-3", "VignetteBuilder": "knitr", "RoxygenNote": "7.1.1", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:35:24 UTC", "RemoteUrl": "https://github.com/bioc/a4Reporting", "RemoteRef": "HEAD", "RemoteSha": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-22 07:35:03 UTC", "User": "root" }, "Author": "Tobias Verbeke [aut],\nLaure Cougnaud [cre]", "Maintainer": "Laure Cougnaud ", "_user": "bioc", "_type": "src", "_file": "a4Reporting_1.61.0.tar.gz", "_fileid": "https://r2.ropensci.org/555f1130977bc45cd05e434402f96a5eef2c485b58b13f5c1adf45089ca50cab", "_filesize": 121059, "_sha256": "555f1130977bc45cd05e434402f96a5eef2c485b58b13f5c1adf45089ca50cab", "_expires": "2026-12-31T07:39:44.000Z", "_created": "2026-09-22T07:35:03.000Z", "_published": "2026-09-22T07:39:46.324Z", "_bioccheck": { "error": 1, "warning": 3, "note": 6 }, "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624", "_status": "success", "_upstream": "https://github.com/bioc/a4Reporting", "_commit": { "id": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777379724 }, "_maintainer": { "name": "Laure Cougnaud", "email": "laure.cougnaud@openanalytics.eu", "login": "lcougnaud", "description": "", "uuid": 15339154 }, "_distro": "resolute", "_jobs": [ { "job": 106656629008, "time": 143, "config": "bioc-checks", "r": "4.6.1", "check": "ERROR", "artifact": "10682172136" }, { "job": 106656629072, "time": 244, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10682191437" }, { "job": 106656628992, "time": 248, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10682636868" }, { "job": 106656628987, "time": 70, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "10681926513" }, { "job": 106656629049, "time": 92, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "10682626505" }, { "job": 106655893287, "time": 159, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "10681836394" }, { "job": 106656629030, "time": 107, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "10682361797" }, { "job": 106656629040, "time": 66, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10682371711" }, { "job": 106656629048, "time": 68, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "10682336758" }, { "job": 106656628986, "time": 75, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10681911517" } ], "_registered": true, "_dependencies": [ { "package": "methods", "role": "Imports" }, { "package": "xtable", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.61.0", "bioc": "3.24" }, { "branch": "release", "version": "1.60.0", "bioc": "3.23" } ], "_topics": [ "microarray" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 468, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 530, "source": "https://www.bioconductor.org/packages/stats/bioc/a4Reporting" }, "_searchresults": 6, "_rbuild": "4.6.1", "_assets": [ "extra/a4Reporting.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "annotationTable", "generateEntrezIdLinks", "generateGOIdLinks", "xtable" ], "_help": [ { "page": "annotationTable", "title": "Function to Create an annotationTable", "topics": [ "annotationTable" ] }, { "page": "annotationTable-class", "title": "Class 'annotationTable'", "topics": [ "annotationTable-class", "show,annotationTable-method" ] }, { "page": "generateEntrezIdLinks", "title": "Transform an ENTREZ ID into a hyperlink", "topics": [ "generateEntrezIdLinks" ] }, { "page": "generateGOIdLinks", "title": "Transform a GO ID into a hyperlink", "topics": [ "generateGOIdLinks" ] }, { "page": "print.xtableAnnotationTable", "title": "Print method for 'xtableAnnotationTable' objects", "topics": [ "print.xtableAnnotationTable" ] }, { "page": "xtable-methods", "title": "Methods for Function xtable in Package `annotationTable'", "topics": [ "xtable,annotationTable,ANY,ANY,ANY,ANY,ANY-method", "xtable,annotationTable,ANY,ANY,ANY,numeric,ANY-method", "xtable,annotationTable,missing,missing,missing,missing,missing-method", "xtable-methods", "xtable.pamClassConfusionTable", "xtable.topTableElnet", "xtable.topTableGlmnet", "xtable.topTableLognet", "xtable.topTablePam", "xtable.topTableRfClass" ] } ], "_rundeps": [ "xtable" ], "_vignettes": [ { "source": "a4reporting-vignette.Rmd", "filename": "a4reporting-vignette.html", "title": "Vignette of the a4Reporting package", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Create an annotation table", "Top table of classification objects", "Appendix", "Session information" ], "created": "2020-10-15 11:36:24", "modified": "2020-10-15 11:36:24", "commits": 1 } ], "_score": 3.778151250383644, "_indexed": true, "_nocasepkg": "a4reporting", "_universes": [ "bioc", "lcougnaud" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.61.0", "date": "2026-09-22T07:39:12.000Z", "distro": "resolute", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/08a88fab05fb3199fdc6597c05be573d582ea4226427f082e631981069f60b59", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" }, { "r": "4.6.1", "os": "linux", "version": "1.61.0", "date": "2026-09-22T07:39:11.000Z", "distro": "resolute", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/c79923e039d81bd4f791e6139a49b25c16dad6da5546b229bb1d8dd8608aa300", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" }, { "r": "4.5.3", "os": "mac", "version": "1.61.0", "date": "2026-09-22T07:36:24.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/b7a06c0bad9ae5a287ea1498e593a0bf7eeeb6973e83765ec68130b6589f0885", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" }, { "r": "4.6.1", "os": "mac", "version": "1.61.0", "date": "2026-09-22T07:36:44.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/35f0b690c8cc9942e32d0076b44e7879cc0980f5025770d36bbd9dc37ea4f49c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" }, { "r": "4.6.0", "os": "wasm", "version": "1.61.0", "date": "2026-09-22T07:37:05.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/02c59075b392387859a892b7a49a50b4cf8c385a29c6c464c3ef4c32040128d8", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" }, { "r": "4.7.0", "os": "win", "version": "1.61.0", "date": "2026-09-22T07:36:06.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/21f1b70624bc9c4b7ed70ac548686f5db0af476b0c06b60d521c3e2caefcd12e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" }, { "r": "4.5.3", "os": "win", "version": "1.61.0", "date": "2026-09-22T07:36:10.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/e7ebc9e7b07d84156ccfad40aa38e54291e56d11ab821fc2839b4dbc975e7a5d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" }, { "r": "4.6.1", "os": "win", "version": "1.61.0", "date": "2026-09-22T07:36:18.000Z", "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e", "fileid": "https://r2.ropensci.org/ff75106ab24c1e9967c2a0d0ded8e51b711a087c930c1188874cd87b50f2f346", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/35700100624" } ] }