{
  "_id": "6ae74e3b818c9e3ef6dbbd65",
  "Package": "a4Reporting",
  "Type": "Package",
  "Title": "Automated Affymetrix Array Analysis Reporting Package",
  "Version": "1.61.0",
  "Date": "2020-10-15",
  "Authors@R": "c(\nperson(given = \"Tobias\", family = \"Verbeke\", role = \"aut\", email = \"tobias.verbeke@openanalytics.eu\"),\nperson(given = \"Laure\", family = \"Cougnaud\", role = \"cre\", email = \"laure.cougnaud@openanalytics.eu\")\n)",
  "Description": "Utility functions to facilitate the reporting of the\nAutomated Affymetrix Array Analysis Reporting set of packages.",
  "biocViews": "Microarray",
  "License": "GPL-3",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.1.1",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:35:24 UTC",
  "RemoteUrl": "https://github.com/bioc/a4Reporting",
  "RemoteRef": "HEAD",
  "RemoteSha": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-11-01 13:14:08 UTC",
    "User": "root"
  },
  "Author": "Tobias Verbeke [aut],\nLaure Cougnaud [cre]",
  "Maintainer": "Laure Cougnaud <laure.cougnaud@openanalytics.eu>",
  "_user": "bioc",
  "_type": "src",
  "_file": "a4Reporting_1.61.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/bad1375dd8585e85d3241b521bd83b55f6cb7ac85abeeef3ace795307cb6a2ed",
  "_filesize": 120644,
  "_sha256": "bad1375dd8585e85d3241b521bd83b55f6cb7ac85abeeef3ace795307cb6a2ed",
  "_expires": "2027-02-09T14:35:37.000Z",
  "_created": "2026-11-01T13:14:08.000Z",
  "_published": "2026-11-01T14:35:39.113Z",
  "_upstream": "https://github.com/bioc/a4Reporting",
  "_status": "success",
  "_maintainer": {
    "name": "Laure Cougnaud",
    "email": "laure.cougnaud@openanalytics.eu",
    "login": "lcougnaud",
    "description": "",
    "uuid": 15339154
  },
  "_jobs": [
    {
      "job": 124859055152,
      "time": 130,
      "config": "bioc-checks",
      "r": "4.6.2",
      "check": "ERROR",
      "artifact": "13085333767"
    },
    {
      "job": 124859055188,
      "time": 191,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13085491371"
    },
    {
      "job": 124859055186,
      "time": 157,
      "config": "linux-release-x86_64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13086130042"
    },
    {
      "job": 124859055174,
      "time": 72,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "13087375544"
    },
    {
      "job": 124859055210,
      "time": 107,
      "config": "macos-release-arm64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13087166068"
    },
    {
      "job": 124857079757,
      "time": 169,
      "config": "source",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13085355936"
    },
    {
      "job": 124859055160,
      "time": 91,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "13085571662"
    },
    {
      "job": 124859055228,
      "time": 63,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13084992918"
    },
    {
      "job": 124859055190,
      "time": 64,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "13085192180"
    },
    {
      "job": 124859055235,
      "time": 58,
      "config": "windows-release-x86_64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13085291714"
    }
  ],
  "_bioccheck": {
    "error": 1,
    "warning": 3,
    "note": 6
  },
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562",
  "_commit": {
    "id": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379724
  },
  "_distro": "resolute",
  "_host": "GitHub-Actions",
  "_registered": true,
  "_dependencies": [
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "xtable",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.61.0",
      "bioc": "3.24",
      "repository": "bioc"
    },
    {
      "branch": "release",
      "version": "1.60.0",
      "bioc": "3.23",
      "repository": "bioc"
    }
  ],
  "_topics": [
    "microarray"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 482,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 557,
    "source": "https://www.bioconductor.org/packages/stats/bioc/a4Reporting"
  },
  "_searchresults": 6,
  "_abi": {
    "exports": [
      {
        "key": "a4Reporting::annotationTable",
        "hash": "4dd8b8e0639eeaec"
      }
    ],
    "imports": []
  },
  "_rbuild": "4.6.2",
  "_assets": [
    "extra/a4Reporting.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "annotationTable",
    "generateEntrezIdLinks",
    "generateGOIdLinks",
    "xtable"
  ],
  "_help": [
    {
      "page": "annotationTable",
      "title": "Function to Create an annotationTable",
      "topics": [
        "annotationTable"
      ]
    },
    {
      "page": "annotationTable-class",
      "title": "Class 'annotationTable'",
      "topics": [
        "annotationTable-class",
        "show,annotationTable-method"
      ]
    },
    {
      "page": "generateEntrezIdLinks",
      "title": "Transform an ENTREZ ID into a hyperlink",
      "topics": [
        "generateEntrezIdLinks"
      ]
    },
    {
      "page": "generateGOIdLinks",
      "title": "Transform a GO ID into a hyperlink",
      "topics": [
        "generateGOIdLinks"
      ]
    },
    {
      "page": "print.xtableAnnotationTable",
      "title": "Print method for 'xtableAnnotationTable' objects",
      "topics": [
        "print.xtableAnnotationTable"
      ]
    },
    {
      "page": "xtable-methods",
      "title": "Methods for Function xtable in Package `annotationTable'",
      "topics": [
        "xtable,annotationTable,ANY,ANY,ANY,ANY,ANY-method",
        "xtable,annotationTable,ANY,ANY,ANY,numeric,ANY-method",
        "xtable,annotationTable,missing,missing,missing,missing,missing-method",
        "xtable-methods",
        "xtable.pamClassConfusionTable",
        "xtable.topTableElnet",
        "xtable.topTableGlmnet",
        "xtable.topTableLognet",
        "xtable.topTablePam",
        "xtable.topTableRfClass"
      ]
    }
  ],
  "_rundeps": [
    "xtable"
  ],
  "_vignettes": [
    {
      "source": "a4reporting-vignette.Rmd",
      "filename": "a4reporting-vignette.html",
      "title": "Vignette of the a4Reporting package",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Create an annotation table",
        "Top table of classification objects",
        "Appendix",
        "Session information"
      ],
      "created": "2020-10-15 11:36:24",
      "modified": "2020-10-15 11:36:24",
      "commits": 1
    }
  ],
  "_score": 3.778151250383644,
  "_indexed": true,
  "_nocasepkg": "a4reporting",
  "_universes": [
    "bioc",
    "lcougnaud"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.61.0",
      "date": "2026-11-01T13:33:10.000Z",
      "distro": "resolute",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/d1e4cefbddd51b05b9a9879e7e5cbc1fceb0413faa5be1f591346f70af8f09a7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    },
    {
      "r": "4.6.2",
      "os": "linux",
      "version": "1.61.0",
      "date": "2026-11-01T13:32:43.000Z",
      "distro": "resolute",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/0bfce94feafa123599b07865c3e33841601de447cc3deb00284fb122e365ac19",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.61.0",
      "date": "2026-11-01T14:17:41.000Z",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/ce5066462d3d06eed2f43631bb16f458f69950c51303cb4bb661661d8c634f44",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    },
    {
      "r": "4.6.2",
      "os": "mac",
      "version": "1.61.0",
      "date": "2026-11-01T14:18:15.000Z",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/4bc272df6ba780eb44beb13607fbd400bbebfbddeb552ab268bbadd4676c1160",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.61.0",
      "date": "2026-11-01T13:31:39.000Z",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/a8d2991b8e7bda4e614bfc0442d9f4dbfb09b9266a29c34486d6f9e18f183966",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.61.0",
      "date": "2026-11-01T13:15:41.000Z",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/1c717668e80d916ea653b8f67244aa90b006dadc97a63cbf2dd5968f2f3454b1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.61.0",
      "date": "2026-11-01T13:15:45.000Z",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/4900c1c1467a9d2283fc716baf62621e0250f8bd5ef6c435a6ac4f757934857b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    },
    {
      "r": "4.6.2",
      "os": "win",
      "version": "1.61.0",
      "date": "2026-11-01T13:15:43.000Z",
      "commit": "9309d3b9ed3fd575f8815d5a3ed8503837fd4b0e",
      "fileid": "https://r2.ropensci.org/3b8a46fe7a091fc3794ab3fd5010056607ddbd242ceaf631bc17ec0cbad2e30e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/41308930562"
    }
  ]
}