{ "_id": "6a1adf3f1d7bb097a09ec23a", "Package": "Spaniel", "Type": "Package", "Title": "Spatial Transcriptomics Analysis", "Version": "1.27.0", "Authors@R": "c(person(\"Rachel\", \"Queen\", role = c(\"aut\", \"cre\"), email = \"rachel.queen@newcastle.ac.uk\"))", "Description": "Spaniel includes a series of tools to aid the quality\ncontrol and analysis of Spatial Transcriptomics data. Spaniel\ncan import data from either the original Spatial\nTranscriptomics system or 10X Visium technology. The package\ncontains functions to create a SingleCellExperiment Seurat\nobject and provides a method of loading a histologial image\ninto R. The spanielPlot function allows visualisation of\nmetrics contained within the S4 object overlaid onto the image\nof the tissue.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "VignetteBuilder": "knitr", "biocViews": "SingleCell, RNASeq, QualityControl, Preprocessing,\nNormalization, Visualization, Transcriptomics, GeneExpression,\nSequencing, Software, DataImport, DataRepresentation,\nInfrastructure, Coverage, Clustering", "Collate": "'utilities.R' 'addClusterCols.R' 'addCoordinates.R'\n'createObjects.R' 'parseImage.R' 'removeSpots.R'\n'spanielPlotInternals.R' 'spanielPlot.R' 'shinySpaniel.R'\n'tenX.R'", "RoxygenNote": "7.1.1", "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libfribidi-dev libglpk-dev make\nlibharfbuzz-dev libicu-dev libjpeg-dev libpng-dev libtiff-dev\nlibuv1-dev libwebp-dev libxml2-dev libssl-dev python3\nzlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:50:59 UTC", "RemoteUrl": 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