{ "_id": "6aca1986fe5cc25786e84adc", "Package": "SpaMTPData", "Type": "Package", "Title": "Experiment Data Resources for SpaMTP Workflows", "Version": "0.99.5", "Date": "2026-09-13", "Authors@R": "c(\nperson(\"Tianyao\", \"Lu\",\nemail = \"lu.t@wehi.edu.au\",\nrole = c(\"aut\", \"cre\")),\nperson(\"Andrew\", \"Causer\", role = \"aut\"),\nperson(\"Quan\", \"Nguyen\", role = \"aut\")\n)", "Description": "Provides lightweight, version-aware access to spatial\nmetabolomics and multi-omics experiment data used in SpaMTP\nworkflows. Resources cover mouse brain, mouse urinary bladder,\nsimulated single-cell multi-omics, annotation-refinement, and\nhuman brain examples. Large files are retrieved through\nExperimentHub or verified source-URL caches rather than stored\nin the package repository. A small deterministic synthetic\nSpatialExperiment with a paired transcriptome supports offline\nexamples and interoperability tests. Native SpatialExperiment\ndatasets are available in a separate resource release;\nhistorical archival objects retain their original\nrepresentations. Conversion and analysis are handled by the\nSpaMTP software package. Native experimental files share a\nZenodo version family with SpaMTPdb without coupling the\npackages at runtime.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "biocViews": "ExperimentData, ExperimentHub, Homo_sapiens_Data,\nMus_musculus_Data, ReproducibleResearch", "VignetteBuilder": "knitr", "Roxygen": "list(markdown = TRUE)", "Config/testthat/edition": "3", "URL": "https://github.com/BCRL-tylu/SpaMTPData", "BugReports": "https://github.com/BCRL-tylu/SpaMTPData/issues", "Config/roxygen2/version": "8.1.0", "Config/pak/sysreqs": "libmagick++-dev gsfonts libicu-dev libpng-dev\nlibssl-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-09-13 12:18:48 UTC", "RemoteUrl": "https://github.com/bioc/SpaMTPData", "RemoteRef": "HEAD", "RemoteSha": "fbe70ba99b9bc55869c09c7eb9fae70e036a2fad", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 10:46:54 UTC", "User": "root" }, "Author": "Tianyao Lu [aut, cre],\nAndrew Causer [aut],\nQuan Nguyen 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