{
  "_id": "6a49bf326dbe3db8b6e97193",
  "Package": "SharedObject",
  "Type": "Package",
  "Title": "Sharing R objects across multiple R processes without memory\nduplication",
  "Version": "1.27.0",
  "Date": "2023-8-9",
  "Authors@R": "c(\nperson(\n\"Jiefei\", \"Wang\",\nemail = \"szwjf08@gmail.com\",\nrole = c(\"aut\", \"cre\")\n),\nperson(\"Martin\", \"Morgan\", role = \"aut\"))",
  "Description": "This package is developed for facilitating parallel\ncomputing in R. It is capable to create an R object in the\nshared memory space and share the data across multiple R\nprocesses. It avoids the overhead of memory dulplication and\ndata transfer, which make sharing big data object across many\nclusters possible.",
  "License": "GPL-3",
  "biocViews": "Infrastructure",
  "BugReports": "https://github.com/Jiefei-Wang/SharedObject/issues",
  "RoxygenNote": "7.1.1",
  "Roxygen": "list(markdown = TRUE)",
  "VignetteBuilder": "knitr",
  "SystemRequirements": "GNU make, C++11",
  "Encoding": "UTF-8",
  "Config/pak/sysreqs": "make",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:50:55 UTC",
  "RemoteUrl": "https://github.com/bioc/SharedObject",
  "RemoteRef": "HEAD",
  "RemoteSha": "fcf311f5a8e58695da2cfc52068bcba90321ae5d",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-18 11:21:25 UTC",
    "User": "root"
  },
  "Author": "Jiefei Wang [aut, cre],\nMartin Morgan [aut]",
  "Maintainer": "Jiefei Wang <szwjf08@gmail.com>",
  "_user": "bioc",
  "_type": "src",
  "_file": "SharedObject_1.27.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/5d42450beaff8a1ff797865b819646b248aec0843d77d4dd068f868c73086659",
  "_filesize": 505194,
  "_sha256": "5d42450beaff8a1ff797865b819646b248aec0843d77d4dd068f868c73086659",
  "_expires": "2026-10-13T02:19:28.000Z",
  "_created": "2026-06-18T11:21:25.000Z",
  "_published": "2026-07-08T04:53:19.909Z",
  "_jobs": [
    {
      "job": 85185416236,
      "time": 195,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "FAILURE",
      "artifact": ""
    },
    {
      "job": 85185416182,
      "time": 184,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416259,
      "time": 228,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416211,
      "time": 135,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416147,
      "time": 196,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416152,
      "time": 128,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7721901492"
    },
    {
      "job": 85185416179,
      "time": 317,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7721968562"
    },
    {
      "job": 85185416223,
      "time": 80,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416207,
      "time": 187,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416217,
      "time": 221,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7721848336"
    },
    {
      "job": 85185416176,
      "time": 118,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416208,
      "time": 82,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 85185416249,
      "time": 167,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7721904820"
    },
    {
      "job": 85185416288,
      "time": 63,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/27755775478",
  "_status": "success",
  "_upstream": "https://github.com/bioc/SharedObject",
  "_commit": {
    "id": "fcf311f5a8e58695da2cfc52068bcba90321ae5d",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777380655
  },
  "_maintainer": {
    "name": "Jiefei Wang",
    "email": "szwjf08@gmail.com",
    "login": "jiefei-wang",
    "description": "",
    "uuid": 13570205
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.6.0",
      "role": "Depends"
    },
    {
      "package": "BH",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "BiocGenerics",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "parallel",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.27.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.25.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "infrastructure",
    "sharedobject",
    "cpp"
  ],
  "_stars": 51,
  "_contributors": [
    {
      "user": "jiefei-wang",
      "count": 222,
      "uuid": 13570205
    },
    {
      "user": "nturaga",
      "count": 12,
      "uuid": 2746443
    },
    {
      "user": "jwokaty",
      "count": 8,
      "uuid": 1744257
    },
    {
      "user": "pekkarr",
      "count": 2,
      "uuid": 40121471
    },
    {
      "user": "lgatto",
      "count": 1,
      "uuid": 384198
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 440,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_devurl": "https://github.com/jiefei-wang/sharedobject",
  "_searchresults": 11,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/SharedObject.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/jiefei-wang/sharedobject",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "allocateSharedMemory",
    "freeSharedMemory",
    "getCopyOnWrite",
    "getLastIndex",
    "getSharedCopy",
    "getSharedMemorySize",
    "getSharedSubset",
    "hasSharedMemory",
    "initialSharedObjectPackageData",
    "is.shared",
    "listSharedObjects",
    "mapSharedMemory",
    "releaseSharedObjectPackageData",
    "setCopyOnWrite",
    "setSharedCopy",
    "setSharedSubset",
    "share",
    "SharedObject",
    "sharedObjectPkgOptions",
    "sharedObjectProperties",
    "unmapSharedMemory",
    "unshare"
  ],
  "_help": [
    {
      "page": "developer-API",
      "title": "Functions to manipulate shared memory",
      "topics": [
        "allocateSharedMemory",
        "freeSharedMemory",
        "getLastIndex",
        "getSharedMemorySize",
        "hasSharedMemory",
        "initialSharedObjectPackageData",
        "mapSharedMemory",
        "releaseSharedObjectPackageData",
        "unmapSharedMemory"
      ]
    },
    {
      "page": "is.altrep",
      "title": "Whether an object is an ALTREP object",
      "topics": [
        "is.altrep"
      ]
    },
    {
      "page": "is.shared",
      "title": "Test whether an object is shared",
      "topics": [
        "is.shared",
        "is.shared,ANY-method"
      ]
    },
    {
      "page": "listSharedObjects",
      "title": "List all shared Objects",
      "topics": [
        "listSharedObjects"
      ]
    },
    {
      "page": "pkgconfig",
      "title": "Find path of the shared memory header file",
      "topics": [
        "pkgconfig"
      ]
    },
    {
      "page": "share",
      "title": "Create a shared object",
      "topics": [
        "share",
        "share,ANY-method",
        "share,data.frame-method",
        "share,list-method",
        "share,matrix-method",
        "share,vector-method"
      ]
    },
    {
      "page": "SharedObject",
      "title": "Create an empty shared object",
      "topics": [
        "SharedObject"
      ]
    },
    {
      "page": "sharedObjectPkgOptions",
      "title": "Get or set the global options for the SharedObject package",
      "topics": [
        "sharedObjectPkgOptions"
      ]
    },
    {
      "page": "sharedObjectProperties",
      "title": "Get/Set the properties of a shared object.",
      "topics": [
        "getCopyOnWrite",
        "getSharedCopy",
        "getSharedSubset",
        "setCopyOnWrite",
        "setSharedCopy",
        "setSharedSubset",
        "sharedObjectProperties",
        "sharedObjectProperties,ANY-method",
        "sharedObjectProperties,list-method"
      ]
    },
    {
      "page": "unshare",
      "title": "Unshare a shared object",
      "topics": [
        "unshare",
        "unshare,ANY-method",
        "unshare,list-method",
        "unshare,vector-method"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/SharedObject/raw/HEAD/README.md",
  "_rundeps": [
    "BH",
    "BiocGenerics",
    "generics",
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "quick_start_guide.Rmd",
      "filename": "quick_start_guide.html",
      "title": "Package Quick Start Guide",
      "author": "Jiefei Wang",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Quick example",
        "Creating a shared object from an existing object",
        "Creating a shared object from scratch",
        "Properties of the shared object",
        "Supported data types and structures",
        "Package options",
        "Advanced topics",
        "Copy-On-Write",
        "Warning",
        "Shared copy",
        "Listing the shared object",
        "Developing package based upon SharedObject",
        "user API",
        "R's shared memory API",
        "C++ shared memory API",
        "Step 1",
        "Step 2",
        "Step 3",
        "Session Information"
      ],
      "created": "2019-06-10 16:41:08",
      "modified": "2022-05-19 02:05:59",
      "commits": 25
    },
    {
      "source": "quick_start_guide_Chinese.Rmd",
      "filename": "quick_start_guide_Chinese.html",
      "title": "新手指引",
      "author": "Jiefei Wang",
      "engine": "knitr::rmarkdown",
      "headings": [
        "介绍",
        "基础用法",
        "通过现有的对象创建共享对象",
        "创建空的共享对象",
        "共享对象的属性",
        "支持的数据类型和结构",
        "Package默认设置",
        "进阶教程",
        "写时拷贝",
        "警告",
        "共享拷贝",
        "列出共享内存编号",
        "基于SharedObject开发package",
        "用户API",
        "R的共享内存管理API",
        "C++的共享内存管理API",
        "第一步",
        "第二步",
        "第三步",
        "Session Information"
      ],
      "created": "2020-10-28 14:55:45",
      "modified": "2020-11-02 12:00:29",
      "commits": 2
    }
  ],
  "_score": 7.1291741029677675,
  "_indexed": true,
  "_nocasepkg": "sharedobject",
  "_universes": [
    "bioc",
    "jiefei-wang"
  ],
  "_failure": {
    "version": "1.27.0",
    "commit": {
      "id": "fcf311f5a8e58695da2cfc52068bcba90321ae5d",
      "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
      "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
      "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
      "time": 1777380655
    },
    "buildurl": "https://github.com/r-universe/bioc/actions/runs/28743046695",
    "date": "2026-07-08T04:53:19.904Z",
    "job": {
      "job": 85789865062,
      "time": 169,
      "config": "source",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "8158495974"
    }
  },
  "_binaries": [
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.27.0",
      "date": "2026-06-18T11:21:27.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "fcf311f5a8e58695da2cfc52068bcba90321ae5d",
      "fileid": "https://r2.ropensci.org/a92fb5d005fd1bc31d7f4caff1d2cdd8ec6f50886c78743dd5dc9d61b28b802e",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/27755775478"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.27.0",
      "date": "2026-06-18T11:23:42.000Z",
      "arch": "aarch64",
      "commit": "fcf311f5a8e58695da2cfc52068bcba90321ae5d",
      "fileid": "https://r2.ropensci.org/9236e40baa33438fbb0d17b79f83d23e4b2294fd97ded66e21f0e13081d56804",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/27755775478"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.27.0",
      "date": "2026-06-18T11:25:40.000Z",
      "arch": "x86_64",
      "commit": "fcf311f5a8e58695da2cfc52068bcba90321ae5d",
      "fileid": "https://r2.ropensci.org/50838757f6c29f17fc416991a7a6bfcf54f9eebf0acd01cfd9761950e2c5f466",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/27755775478"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.27.0",
      "date": "2026-06-18T11:23:02.000Z",
      "arch": "x86_64",
      "commit": "fcf311f5a8e58695da2cfc52068bcba90321ae5d",
      "fileid": "https://r2.ropensci.org/109afbefeaab139bd757d608ad7eeddbbadcbb2b736dcd891ede13e598451960",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/27755775478"
    }
  ]
}