{
  "_id": "6a49403218cdde069385d9e9",
  "Package": "ScaledMatrix",
  "Version": "1.21.0",
  "Date": "2024-02-29",
  "Title": "Creating a DelayedMatrix of Scaled and Centered Values",
  "Authors@R": "person(\"Aaron\", \"Lun\", role=c(\"aut\", \"cre\", \"cph\"),\nemail=\"infinite.monkeys.with.keyboards@gmail.com\")",
  "biocViews": "Software, DataRepresentation",
  "Description": "Provides delayed computation of a matrix of scaled and\ncentered values. The result is equivalent to using the scale()\nfunction but avoids explicit realization of a dense matrix\nduring block processing. This permits greater efficiency in\ncommon operations, most notably matrix multiplication.",
  "License": "GPL-3",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.3.1",
  "BugReports": "https://github.com/LTLA/ScaledMatrix/issues",
  "URL": "https://github.com/LTLA/ScaledMatrix",
  "Config/pak/sysreqs": "zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:54:45 UTC",
  "RemoteUrl": "https://github.com/bioc/ScaledMatrix",
  "RemoteRef": "HEAD",
  "RemoteSha": "bed8e01f55e8784a21e89fa425516baa10accc71",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-04 05:55:07 UTC",
    "User": "root"
  },
  "Author": "Aaron Lun [aut, cre, cph]",
  "Maintainer": "Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>",
  "_user": "bioc",
  "_type": "src",
  "_file": "ScaledMatrix_1.21.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/1af09baf4413e3abed99b1f82f80729a2669b3b3560552d4ab1b506e8ab7ec25",
  "_filesize": 104104,
  "_sha256": "1af09baf4413e3abed99b1f82f80729a2669b3b3560552d4ab1b506e8ab7ec25",
  "_expires": "2026-10-12T17:17:36.000Z",
  "_created": "2026-07-04T05:55:07.000Z",
  "_published": "2026-07-04T17:17:38.101Z",
  "_bioccheck": {
    "error": 0,
    "warning": 0,
    "note": 6
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866",
  "_status": "success",
  "_upstream": "https://github.com/bioc/ScaledMatrix",
  "_commit": {
    "id": "bed8e01f55e8784a21e89fa425516baa10accc71",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777380885
  },
  "_maintainer": {
    "name": "Aaron Lun",
    "email": "infinite.monkeys.with.keyboards@gmail.com",
    "login": "ltla",
    "twitter": "@realAaronLun",
    "description": "(ノಠ益ಠ)ノ彡┻━┻\n",
    "uuid": 8166669
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 85151489874,
      "time": 175,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8078897082"
    },
    {
      "job": 85151489648,
      "time": 271,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8078908018"
    },
    {
      "job": 85151489795,
      "time": 305,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8078912318"
    },
    {
      "job": 85151489711,
      "time": 119,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8079191073"
    },
    {
      "job": 85151489786,
      "time": 145,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8079189599"
    },
    {
      "job": 85151489548,
      "time": 259,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8078875736"
    },
    {
      "job": 85151489791,
      "time": 159,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8078895235"
    },
    {
      "job": 85151489675,
      "time": 208,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8078900797"
    },
    {
      "job": 85151489777,
      "time": 219,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8078902314"
    },
    {
      "job": 85151489788,
      "time": 185,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8078898250"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "S4Vectors",
      "role": "Imports"
    },
    {
      "package": "DelayedArray",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "BiocSingular",
      "role": "Suggests"
    },
    {
      "package": "DelayedMatrixStats",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 125,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.21.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.20.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "software",
    "datarepresentation"
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "jwokaty",
      "count": 10,
      "uuid": 1744257
    },
    {
      "user": "ltla",
      "count": 8,
      "uuid": 8166669
    },
    {
      "user": "nturaga",
      "count": 6,
      "uuid": 2746443
    },
    {
      "user": "hpages",
      "count": 1,
      "uuid": 8810451
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 445,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_devurl": "https://github.com/ltla/scaledmatrix",
  "_searchresults": 15,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/ScaledMatrix.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/ltla/scaledmatrix",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "colMeans",
    "colSums",
    "DelayedArray",
    "extract_array",
    "rowMeans",
    "rowSums",
    "ScaledMatrix",
    "ScaledMatrixSeed",
    "show",
    "t"
  ],
  "_help": [
    {
      "page": "ScaledMatrix",
      "title": "The ScaledMatrix class",
      "topics": [
        "%*%,ANY,ScaledMatrix-method",
        "%*%,ScaledMatrix,ANY-method",
        "%*%,ScaledMatrix,ScaledMatrix-method",
        "colMeans,ScaledMatrix-method",
        "colSums,ScaledMatrix-method",
        "crossprod,ANY,ScaledMatrix-method",
        "crossprod,ScaledMatrix,ANY-method",
        "crossprod,ScaledMatrix,missing-method",
        "crossprod,ScaledMatrix,ScaledMatrix-method",
        "DelayedArray,ScaledMatrixSeed-method",
        "dim,ScaledMatrixSeed-method",
        "dimnames,ScaledMatrixSeed-method",
        "dimnames<-,ScaledMatrix,ANY-method",
        "extract_array,ScaledMatrixSeed-method",
        "rowMeans,ScaledMatrix-method",
        "rowSums,ScaledMatrix-method",
        "ScaledMatrix",
        "ScaledMatrix-class",
        "ScaledMatrixSeed",
        "ScaledMatrixSeed-class",
        "show,ScaledMatrixSeed-method",
        "t,ScaledMatrix-method",
        "tcrossprod,ANY,ScaledMatrix-method",
        "tcrossprod,ScaledMatrix,ANY-method",
        "tcrossprod,ScaledMatrix,missing-method",
        "tcrossprod,ScaledMatrix,ScaledMatrix-method",
        "[,ScaledMatrix,ANY,ANY,ANY-method"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/ScaledMatrix/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "BiocGenerics",
    "DelayedArray",
    "generics",
    "IRanges",
    "lattice",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "S4Arrays",
    "S4Vectors",
    "SparseArray",
    "XVector"
  ],
  "_vignettes": [
    {
      "source": "ScaledMatrix.Rmd",
      "filename": "ScaledMatrix.html",
      "title": "Using the ScaledMatrix class",
      "author": "Aaron Lun",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Overview",
        "Matrix multiplication",
        "Other utilities",
        "Caveats",
        "Session information"
      ],
      "created": "2020-12-13 01:13:39",
      "modified": "2023-05-03 16:17:37",
      "commits": 4
    }
  ],
  "_score": 7.227243781503063,
  "_indexed": true,
  "_nocasepkg": "scaledmatrix",
  "_universes": [
    "bioc",
    "ltla"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.21.0",
      "date": "2026-07-04T05:58:14.000Z",
      "distro": "resolute",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/aee87523437ecf876b22f8f0526e03519a5f6f8415634ba575e874b11205a976",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.21.0",
      "date": "2026-07-04T05:58:42.000Z",
      "distro": "resolute",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/86558e35adb64094d7037fd8fd1b1250cfd12d0691503cd5ac6256b83a55fc37",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.21.0",
      "date": "2026-07-04T06:35:03.000Z",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/ddb9c3c47a5767c78ac8e1918d4e0bf2a759ee874180bf591da51d397e4de6af",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.21.0",
      "date": "2026-07-04T06:34:39.000Z",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/63722e7d29cfad178989ebeded6d1faaaec78f03306a48fe4f89ceb0b7793d36",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.21.0",
      "date": "2026-07-04T05:58:11.000Z",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/a8f1efea4a382fbb219f30c6bb6a66b1f357fdcdeb69bc7ba2ff0582864688e1",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.21.0",
      "date": "2026-07-04T05:57:01.000Z",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/5adbe35d27dd7cae244131b01a013204d09fd1084b16454f32b9fe4f7d16003c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.21.0",
      "date": "2026-07-04T05:56:53.000Z",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/ac0edf35f05fdec78cc843bfaf0ad72b68a211d3e363878dbbb8db97ebc2f776",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.21.0",
      "date": "2026-07-04T05:56:46.000Z",
      "commit": "bed8e01f55e8784a21e89fa425516baa10accc71",
      "fileid": "https://r2.ropensci.org/bb5cc865804b7ea185f0abfa96a930c5644ebe030a19dfaec09cb4d24fd3c778",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28696811866"
    }
  ]
}