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  "Description": "RNA-Seq is currently used routinely, and it provides\naccurate information on gene transcription. However, the method\ncannot accurately estimate duplicated genes expression. Several\nstrategies have been previously used, but all of them provide\nbiased results. With Rmmquant, if a read maps at different\npositions, the tool detects that the corresponding genes are\nduplicated; it merges the genes and creates a merged gene. The\ncounts of ambiguous reads is then based on the input genes and\nthe merged genes. Rmmquant is a drop-in replacement of the\nwidely used tools findOverlaps and featureCounts that handles\nmulti-mapping reads in an unabiased way.",
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