{ "_id": "6a497392f408bf5a1e5fdcf8", "Package": "Rhdf5lib", "Type": "Package", "Title": "hdf5 library as an R package", "Version": "2.1.0", "Authors@R": "c(\nperson(\n\"Mike\", \"Smith\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0002-7800-3848\")\n),\nperson(\n\"Hugo\", \"Gruson\",\nrole = \"cre\",\nemail = \"hugo.gruson@embl.de\",\ncomment = c(ORCID = \"0000-0002-4094-1476\"))\n,\nperson(\ngiven = \"The HDF Group\",\nrole = \"cph\"\n)\n)", "Description": "Provides C and C++ hdf5 libraries.", "License": "Artistic-2.0", "Copyright": "vendor/hdf5/COPYING", "LazyLoad": "true", "VignetteBuilder": "knitr", "URL": "https://github.com/Huber-group-EMBL/Rhdf5lib", "BugReports": "https://github.com/Huber-group-EMBL/Rhdf5lib/issues", "NeedsCompilation": "yes", "Encoding": "UTF-8", "biocViews": "Infrastructure", "RoxygenNote": "7.3.3", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:45:53 UTC", "RemoteUrl": "https://github.com/bioc/Rhdf5lib", "RemoteRef": "HEAD", "RemoteSha": "c893d8402c955c3b44bb07ba729a4587803b5daa", "Packaged": { "Date": "2026-06-23 14:53:50 UTC", "User": "root" }, "Author": "Mike Smith [ctb] (ORCID: ),\nHugo Gruson [cre] (ORCID: ),\nThe HDF Group [cph]", "Maintainer": "Hugo Gruson ", "_user": "bioc", "_type": "src", "_file": "Rhdf5lib_2.1.0.tar.gz", "_fileid": "https://r2.ropensci.org/77014b6838772d32b1a998a57d0065aa105576e6d06ef892dab6f88d4d95eceb", "_filesize": 4862756, "_sha256": "77014b6838772d32b1a998a57d0065aa105576e6d06ef892dab6f88d4d95eceb", "_expires": "2026-10-12T20:56:48.000Z", "_created": "2026-06-23T14:53:50.000Z", "_published": "2026-07-04T20:56:50.252Z", "_bioccheck": { "error": 0, "warning": 0, "note": 5 }, "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100", "_status": "success", "_upstream": "https://github.com/bioc/Rhdf5lib", "_commit": { "id": "c893d8402c955c3b44bb07ba729a4587803b5daa", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777380353 }, "_maintainer": { "name": "Hugo Gruson", "email": "hugo.gruson@embl.de", "login": "bisaloo", "mastodon": "@grusonh@mastodon.social", "orcid": "0000-0002-4094-1476", "description": "Evolutionary Biologist turned Research Software Engineer in R.", "uuid": 10783929 }, "_distro": "resolute", "_jobs": [ { "job": 85166362059, "time": 354, "config": "bioc-checks", "r": "4.6.0", "check": "NOTE", "artifact": "7824766618" }, { "job": 85166362213, "time": 314, "config": "linux-devel-arm64", "r": "4.7.0", "check": "WARNING", "artifact": "7824751167" }, { "job": 85166362091, "time": 320, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "7824752908" }, { "job": 85166362268, "time": 282, "config": "linux-release-arm64", "r": "4.6.0", "check": "WARNING", "artifact": "7824738489" }, { "job": 85166362260, "time": 352, "config": "linux-release-x86_64", "r": "4.6.0", "check": "WARNING", "artifact": "7824766597" }, { "job": 85166362195, "time": 231, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7824717033" }, { "job": 85166362208, "time": 556, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "7824848938" }, { "job": 85166362220, "time": 263, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7824730470" }, { "job": 85166362094, "time": 597, "config": "macos-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7824866253" }, { "job": 85166361957, "time": 464, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7824622125" }, { "job": 85166362158, "time": 145, "config": "wasm-release", "r": "4.6.0", "check": "FAIL", "artifact": "" }, { "job": 85166362186, "time": 744, "config": "windows-devel", "r": "4.7.0", "check": "WARNING", "artifact": "7824928307" }, { "job": 85166362179, "time": 720, "config": "windows-oldrel", "r": "4.5.3", "check": "WARNING", "artifact": "7824918502" }, { "job": 85166362078, "time": 706, "config": "windows-release", "r": "4.6.0", "check": "WARNING", "artifact": "7824912270" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.2.0", "role": "Depends" }, { "package": "biocmake", "role": "LinkingTo" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "tinytest", "role": "Suggests" }, { "package": "mockery", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 347, "_updates": [ { "week": "2025-42", "n": 1 }, { "week": "2025-44", "n": 2 }, { "week": "2026-11", "n": 53 }, { "week": "2026-12", "n": 4 }, { "week": "2026-17", "n": 1 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "2.1.0", "bioc": "3.24" }, { "branch": "release", "version": "2.0.0", "bioc": "3.23" } ], "_topics": [ "infrastructure", "bioconductor", "hdf5", "hdf5-library" ], "_stars": 7, "_contributors": [ { "user": "grimbough", "count": 266, "uuid": 971237 }, { "user": "bisaloo", "count": 61, "uuid": 10783929 }, { "user": "jwokaty", "count": 16, "uuid": 1744257 }, { "user": "nturaga", "count": 14, "uuid": 2746443 }, { "user": "hpages", "count": 2, "uuid": 8810451 }, { "user": "lawremi", "count": 2, "uuid": 158190 }, { "user": "vobencha", "count": 2, "uuid": 2466173 }, { "user": "heckendorfc", "count": 1, "uuid": 684117 }, { "user": "jeroen", "count": 1, "uuid": 216319 }, { "user": "mtmorgan", "count": 1, "uuid": 118552 }, { "user": "shians", "count": 1, "uuid": 6036662 }, { "user": "miesav", "count": 1, "uuid": 37282444 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 441, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_devurl": "https://github.com/huber-group-embl/rhdf5lib", "_searchresults": 29, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/Rhdf5lib.html", "manual.pdf" ], "_homeurl": "https://github.com/huber-group-embl/rhdf5lib", "_realowner": "bioc", "_cranurl": false, "_exports": [ "getHdf5Version", "pkgconfig" ], "_help": [ { "page": "getHdf5Version", "title": "Report the version of HDF5 distributed with this package", "topics": [ "getHdf5Version" ] }, { "page": "pkgconfig", "title": "Compiler arguments for using Rhdf5lib", "topics": [ "pkgconfig" ] }, { "page": "Rhdf5lib", "title": "Rhdf5lib: A version of the HDF5 library built into an R package.", "topics": [ "Rhdf5lib-package", "Rhdf5lib" ] } ], "_pkglogo": "https://github.com/bioc/Rhdf5lib/raw/HEAD/man/figures/logo.png", "_readme": "https://github.com/bioc/Rhdf5lib/raw/HEAD/README.md", "_rundeps": [ "biocmake", "dir.expiry", "filelock" ], "_vignettes": [ { "source": "Rhdf5lib.Rmd", "filename": "Rhdf5lib.html", "title": "Linking to Rhdf5lib", "author": "Mike L. Smith", "engine": "knitr::rmarkdown", "headings": [ "Motivation", "Usage", "Link to the library", "Locating the library headers", "Configuration arguments for non-standard system setups", "Funding", "Session info" ], "created": "2017-07-07 09:22:10", "modified": "2026-03-16 10:10:47", "commits": 17 } ], "_score": 9.843460707301636, "_indexed": true, "_nocasepkg": "rhdf5lib", "_universes": [ "bioc", "bisaloo", "huber-group-embl" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2.1.0", "date": "2026-06-23T15:01:42.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/267bce4b8aa3fe0b4e28d70f6300c6b0b5d2cb24fbae1f4ea01780893981ae82", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.7.0", "os": "linux", "version": "2.1.0", "date": "2026-06-23T15:01:43.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/b540760321e13c97edc8564f5469fa9500c50d76f72007c0a8258cebc69ea9dc", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.6.0", "os": "linux", "version": "2.1.0", "date": "2026-06-23T15:01:11.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/23091e686d6ca66e1aa140e9d59975a42f604500affd49805746ca2757532421", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.6.0", "os": "linux", "version": "2.1.0", "date": "2026-06-23T15:02:16.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/2001a8bfa55bddf77c446e3f0804920ff9ef7b1303ea602ea25147627a824b9d", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.5.3", "os": "mac", "version": "2.1.0", "date": "2026-06-23T15:00:10.000Z", "arch": "aarch64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/5ae60167469beee966ba17191f13a9397b62109a81d3876cd044b345cba4d56b", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.5.3", "os": "mac", "version": "2.1.0", "date": "2026-06-23T15:05:16.000Z", "arch": "x86_64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/62f819938571bc5019b33c95e8f5992e1ae22df6f997ee21cb6a5b7842fdc312", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.6.0", "os": "mac", "version": "2.1.0", "date": "2026-06-23T15:00:36.000Z", "arch": "aarch64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/8b01f3529bc72463d94b1fbc63417a7d75b9e1a6ac7e22e12f116c518ef3d281", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.6.0", "os": "mac", "version": "2.1.0", "date": "2026-06-23T15:06:02.000Z", "arch": "x86_64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/001bf82d09810cdbc225b2d23e549d7aefdadb11dfaaef0c7a20bd9bf56b75bf", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.7.0", "os": "win", "version": "2.1.0", "date": "2026-06-23T15:08:32.000Z", "arch": "x86_64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/219c6c0eb9c40018c358240c47806fc5cf180c06813b5b0f5a2eb15edbc57f47", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.5.3", "os": "win", "version": "2.1.0", "date": "2026-06-23T15:08:10.000Z", "arch": "x86_64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/48f6f18c08565e6fdc16f59675f51d620e2c44dd75675991693c184a93b86bab", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" }, { "r": "4.6.0", "os": "win", "version": "2.1.0", "date": "2026-06-23T15:07:57.000Z", "arch": "x86_64", "commit": "c893d8402c955c3b44bb07ba729a4587803b5daa", "fileid": "https://r2.ropensci.org/6f74c15ecb7061797c38f3554cd3f1a3ef2e85b41b9f4146be3e5f51537957e2", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28034654100" } ] }