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  "Package": "Rgraphviz",
  "Title": "Provides plotting capabilities for R graph objects",
  "Description": "Interfaces R with the AT and T graphviz library for\nplotting R graph objects from the graph package.",
  "Version": "2.57.0",
  "Authors@R": "c(person(c(\"Kasper\", \"Daniel\"), \"Hansen\", role = c(\"cre\", \"aut\"),\nemail = \"kasperdanielhansen@gmail.com\"),\nperson(\"Jeff\", \"Gentry\", role = \"aut\"),\nperson(\"Li\", \"Long\", role = \"aut\"),\nperson(\"Robert\", \"Gentleman\", role = \"aut\"),\nperson(\"Seth\", \"Falcon\", role = \"aut\"),\nperson(\"Florian\", \"Hahne\", role = \"aut\"),\nperson(\"Deepayan\", \"Sarkar\", role = \"aut\"))",
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  "GraphvizDetails": "Graphviz 2.28.0",
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  "Collate": "AllGenerics.R AllClasses.R SimpleMethods.R graphvizVersion.R\ngraphviz_build_version.R agfunctions.R attrs.R graphLayout.R\nplotGraph.R plotUtils.R layoutGraph.R renderGraph.R\ngraph_methods.R writers.R zzz.R",
  "biocViews": "GraphAndNetwork, Visualization",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:30:08 UTC",
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    "boundBox",
    "buildEdgeList",
    "buildNodeList",
    "checkAttrs",
    "clusterData",
    "clusterData<-",
    "color",
    "cPoints",
    "drawAgNode",
    "drawTxtLabel",
    "edgeData",
    "edgeData<-",
    "edgeDataDefaults",
    "edgeDataDefaults<-",
    "edgemode",
    "edgeNames",
    "ep",
    "fillcolor",
    "from",
    "getDefaultAttrs",
    "getNodeCenter",
    "getNodeHeight",
    "getNodeLabels",
    "getNodeLW",
    "getNodeNames",
    "getNodeRW",
    "getNodeXY",
    "getPoints",
    "getSpline",
    "getX",
    "getY",
    "graphData",
    "graphData<-",
    "graphDataDefaults",
    "graphDataDefaults<-",
    "graphLayout",
    "graphvizCapabilities",
    "graphvizVersion",
    "head",
    "labelColor",
    "labelFontsize",
    "labelJust",
    "labelLoc",
    "labelText",
    "labelWidth",
    "laidout",
    "layoutGraph",
    "layoutType",
    "lines",
    "makeNodeAttrs",
    "name",
    "nodeData",
    "nodeData<-",
    "nodeDataDefaults",
    "nodeDataDefaults<-",
    "numSplines",
    "pieGlyph",
    "plot",
    "pointList",
    "removedEdges",
    "renderGraph",
    "shape",
    "show",
    "sp",
    "splines",
    "style",
    "tail",
    "to",
    "toDot",
    "toFile",
    "txtLabel",
    "upRight"
  ],
  "_help": [
    {
      "page": "AgEdge-class",
      "title": "Class \"AgEdge\": A class to describe an edge for a Ragraph object",
      "topics": [
        "AgEdge",
        "AgEdge-class",
        "AgEdge<-",
        "arrowhead",
        "arrowhead,AgEdge-method",
        "arrowsize",
        "arrowsize,AgEdge-method",
        "arrowtail",
        "arrowtail,AgEdge-method",
        "color,AgEdge-method",
        "ep",
        "ep,AgEdge-method",
        "getSpline",
        "getSpline,AgEdge-method",
        "head",
        "head,AgEdge-method",
        "lines,AgEdge-method",
        "numSplines",
        "numSplines,AgEdge-method",
        "show,AgEdge-method",
        "sp",
        "sp,AgEdge-method",
        "splines",
        "splines,AgEdge-method",
        "tail",
        "tail,AgEdge-method",
        "txtLabel",
        "txtLabel,AgEdge-method"
      ]
    },
    {
      "page": "AgNode-class",
      "title": "Class \"AgNode\": A class to describe a node for a Ragraph object",
      "topics": [
        "AgNode",
        "AgNode-class",
        "AgNode<-",
        "color",
        "color,AgNode-method",
        "drawAgNode",
        "fillcolor",
        "fillcolor,AgNode-method",
        "getNodeCenter",
        "getNodeCenter,AgNode-method",
        "getNodeHeight",
        "getNodeHeight,AgNode-method",
        "getNodeLW",
        "getNodeLW,AgNode-method",
        "getNodeRW",
        "getNodeRW,AgNode-method",
        "getNodeXY,AgNode-method",
        "getRadiusDiv",
        "name",
        "name,AgNode-method",
        "shape",
        "shape,AgNode-method",
        "style",
        "style,AgNode-method",
        "txtLabel,AgNode-method"
      ]
    },
    {
      "page": "agopen",
      "title": "A function to obtain a libgraph object",
      "topics": [
        "agopen"
      ]
    },
    {
      "page": "agopenSimple",
      "title": "A function to obtain a Ragraph object",
      "topics": [
        "agopenSimple"
      ]
    },
    {
      "page": "AgTextLabel-class",
      "title": "Class \"AgTextLabel\": Represents a graphviz text label",
      "topics": [
        "AgTextLabel-class",
        "drawTxtLabel",
        "labelColor",
        "labelColor,AgTextLabel-method",
        "labelFontsize",
        "labelFontsize,AgTextLabel-method",
        "labelJust",
        "labelJust,AgTextLabel-method",
        "labelLoc",
        "labelLoc,AgTextLabel-method",
        "labelText",
        "labelText,AgTextLabel-method",
        "labelWidth",
        "labelWidth,AgTextLabel-method"
      ]
    },
    {
      "page": "agwrite",
      "title": "Read / write Ragraph objects",
      "topics": [
        "agread",
        "agwrite"
      ]
    },
    {
      "page": "BezierCurve-class",
      "title": "Class \"BezierCurve\": A class to describe a Bezier curve",
      "topics": [
        "BezierCurve",
        "BezierCurve-class",
        "bezierPoints",
        "bezierPoints,BezierCurve-method",
        "bLines",
        "bLines,BezierCurve-method",
        "cPoints",
        "cPoints,BezierCurve-method",
        "lines,BezierCurve-method",
        "pointList",
        "pointList,BezierCurve-method",
        "show,BezierCurve-method"
      ]
    },
    {
      "page": "boundingBox-class",
      "title": "Class \"boundingBox\": A class to describe the bounding box of a Ragraph",
      "topics": [
        "botLeft",
        "botLeft,boundingBox-method",
        "boundingBox",
        "boundingBox-class",
        "upRight",
        "upRight,boundingBox-method"
      ]
    },
    {
      "page": "buildNodeList",
      "title": "A function to build lists of node and edge objects",
      "topics": [
        "buildEdgeList",
        "buildNodeList",
        "edgeL,clusterGraph-method",
        "edgeL,distGraph-method"
      ]
    },
    {
      "page": "clusterData-methods",
      "title": "Get and set attributes for a cluster of an Ragraph object",
      "topics": [
        "clusterData",
        "clusterData-methods",
        "clusterData<-",
        "clusterData<--methods"
      ]
    },
    {
      "page": "getDefaultAttrs",
      "title": "Functions to generate and check global attribute lists",
      "topics": [
        "checkAttrs",
        "getDefaultAttrs"
      ]
    },
    {
      "page": "graphData-methods",
      "title": "Get and set attributes of an Ragraph object",
      "topics": [
        "graphData",
        "graphData-methods",
        "graphData<-",
        "graphData<--methods"
      ]
    },
    {
      "page": "graphDataDefaults-methods",
      "title": "Get and set default attributes for an Ragraph",
      "topics": [
        "graphDataDefaults",
        "graphDataDefaults-methods",
        "graphDataDefaults<-",
        "graphDataDefaults<--methods"
      ]
    },
    {
      "page": "graphLayout",
      "title": "A function to layout graph locations",
      "topics": [
        "graphLayout"
      ]
    },
    {
      "page": "GraphvizAttributes",
      "title": "Graph Attributes for Rgraphviz",
      "topics": [
        "edgeAttributes",
        "graphAttributes",
        "graphviz",
        "GraphvizAttributes",
        "nodeAttributes"
      ]
    },
    {
      "page": "graphvizCapabilities",
      "title": "List capabilities of Graphviz",
      "topics": [
        "graphvizCapabilities"
      ]
    },
    {
      "page": "GraphvizLayouts",
      "title": "Graphviz Layout Methods",
      "topics": [
        "circo",
        "dot",
        "fdp",
        "GraphvizLayouts",
        "neato",
        "twopi"
      ]
    },
    {
      "page": "graphvizVersion",
      "title": "A function to determine graphviz library version",
      "topics": [
        "graphvizVersion"
      ]
    },
    {
      "page": "layoutGraph",
      "title": "A function to compute layouts of graph objects",
      "topics": [
        "layoutGraph"
      ]
    },
    {
      "page": "makeNodeAttrs",
      "title": "make a list of character vectors that can be used as a value for the nodeAttrs argument in agopen",
      "topics": [
        "makeNodeAttrs"
      ]
    },
    {
      "page": "pEdge-class",
      "title": "Class \"pEdge\": A class to represent an edge",
      "topics": [
        "from",
        "from,pEdge-method",
        "pEdge",
        "pEdge-class",
        "to",
        "to,pEdge-method"
      ]
    },
    {
      "page": "pieGlyph",
      "title": "A function to plot pie graphs as a glyph",
      "topics": [
        "pieGlyph"
      ]
    },
    {
      "page": "plot-methods",
      "title": "Plot a graph object - methods",
      "topics": [
        "plot,graph,ANY-method",
        "plot,Ragraph,ANY-method",
        "plot.graph",
        "plot.graphNEL",
        "plot.Ragraph"
      ]
    },
    {
      "page": "pNode-class",
      "title": "Class \"pNode\": A class to plot nodes",
      "topics": [
        "name,pNode-method",
        "pNode",
        "pNode-class"
      ]
    },
    {
      "page": "Ragraph-class",
      "title": "Class \"Ragraph\": A class to handle libgraph representations",
      "topics": [
        "AgEdge,Ragraph-method",
        "AgEdge<-,Ragraph-method",
        "AgNode,Ragraph-method",
        "AgNode<-,Ragraph-method",
        "agraph",
        "agraph,Ragraph-method",
        "boundBox",
        "boundBox,Ragraph-method",
        "clusterData,Ragraph,numeric,vector-method",
        "clusterData<-,Ragraph,numeric,vector,vector-method",
        "edgeData,Ragraph,vector,vector,vector-method",
        "edgeData<-,Ragraph,vector,vector,vector,vector-method",
        "edgeDataDefaults,Ragraph,missing-method",
        "edgeDataDefaults<-,Ragraph,vector,vector-method",
        "edgemode",
        "edgemode,Ragraph-method",
        "edgeNames,Ragraph-method",
        "getNodeHeight,Ragraph-method",
        "getNodeLabels",
        "getNodeLW,Ragraph-method",
        "getNodeNames",
        "getNodeRW,Ragraph-method",
        "getNodeXY",
        "getNodeXY,Ragraph-method",
        "graphData,Ragraph,vector-method",
        "graphData<-,Ragraph,vector,vector-method",
        "graphDataDefaults,Ragraph-method",
        "graphDataDefaults<-,Ragraph,vector,vector-method",
        "laidout",
        "laidout,Ragraph-method",
        "layoutType",
        "layoutType,Ragraph-method",
        "nodeData,Ragraph,vector,vector-method",
        "nodeData<-,Ragraph,vector,vector,vector-method",
        "nodeDataDefaults,Ragraph,missing-method",
        "nodeDataDefaults<-,Ragraph,vector,vector-method",
        "Ragraph",
        "Ragraph-class",
        "show,Ragraph-method"
      ]
    },
    {
      "page": "removedEdges",
      "title": "A Function To List Removed Edges",
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        "removedEdges"
      ]
    },
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      "page": "renderGraph",
      "title": "Render a laid out graph object",
      "topics": [
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        "renderGraph,graph-method"
      ]
    },
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      "page": "toDot-methods",
      "title": "A Generic For Converting Objects To Dot",
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        "toDot",
        "toDot,graph-method",
        "toDot-methods"
      ]
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      ]
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        "getPoints",
        "getPoints,xyPoint-method",
        "getX",
        "getX,xyPoint-method",
        "getY",
        "getY,xyPoint-method",
        "show,xyPoint-method",
        "xyPoint",
        "xyPoint-class"
      ]
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