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      "title": "Adverse Events Domain",
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      "title": "Concomitant Medications Domain",
      "topics": [
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      "title": "Demographics Domain",
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    {
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      "topics": [
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    },
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    {
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      "title": "Exposure Domain",
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      "topics": [
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        "Findings-class"
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      "title": "Genetics Findings Domain",
      "topics": [
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      ]
    },
    {
      "page": "getAssayDataOfStudies",
      "title": "Get specific assay data of one or more studies from the ImmPort database",
      "topics": [
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      ]
    },
    {
      "page": "getDomainCode",
      "title": "Get code of a specific domain",
      "topics": [
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      ]
    },
    {
      "page": "getDomainDataOfStudies",
      "title": "Get specific domain data of one or more studies from the ImmPort database",
      "topics": [
        "getDomainDataOfStudies"
      ]
    },
    {
      "page": "getListOfAssayTypes",
      "title": "Get a list of Assay Types",
      "topics": [
        "getListOfAssayTypes"
      ]
    },
    {
      "page": "getListOfDomains",
      "title": "Get names of all domains and their codes",
      "topics": [
        "getListOfDomains"
      ]
    },
    {
      "page": "getListOfStudies",
      "title": "Get a list of all studies",
      "topics": [
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      ]
    },
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      "topics": [
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    },
    {
      "page": "getStudiesWithSpecificDomainData",
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      ]
    },
    {
      "page": "getStudy",
      "title": "Get all data of a specific study from the ImmPort data source",
      "topics": [
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      ]
    },
    {
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      "title": "Interventions class",
      "topics": [
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        "Interventions-class"
      ]
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      "title": "Laboratory Test Results Domain",
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    },
    {
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      "title": "Laboratory Test Results Domain Variables",
      "topics": [
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    },
    {
      "page": "loadSerializedStudyData",
      "title": "Load the Serialized Data of a Study",
      "topics": [
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      ]
    },
    {
      "page": "Medical-History-Domain",
      "title": "Medical History Domain",
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      ]
    },
    {
      "page": "mergeDomainAndSupplemental",
      "title": "Merge the Domain dataframe and Supplemental dataframe (long form)",
      "topics": [
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    },
    {
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      "title": "Medical History Domain Variables",
      "topics": [
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    },
    {
      "page": "Nucleic-Acid-Quantification-Domain",
      "title": "Nucleic Acid Quantification Domain",
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    },
    {
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      "title": "Protein Quantification Domain",
      "topics": [
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    },
    {
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      "title": "Protocol Deviations Domain",
      "topics": [
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    },
    {
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      "title": "Questionnaires Domain Variables",
      "topics": [
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    },
    {
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      "title": "Questionnaires Domain",
      "topics": [
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    },
    {
      "page": "RImmPort",
      "title": "RImmPort: Enabling ready-for-analysis immunology research data",
      "topics": [
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        "RImmPort"
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    },
    {
      "page": "serialzeStudyData",
      "title": "Serialize the Study Data",
      "topics": [
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      "title": "Set ImmPort data ource",
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      "title": "Skin Response Domain",
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      "title": "Study class",
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      "title": "Substance Use Domain Variables",
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        "SU"
      ]
    },
    {
      "page": "Subject-Visits-Domain",
      "title": "Subject Visits Domain",
      "topics": [
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    {
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      "title": "Substance Use Domain",
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    },
    {
      "page": "SUPPDV",
      "title": "Protocol Deviations Domain Supplemental Variables",
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      "page": "SUPPFA",
      "title": "Findings About Domain Supplemental Variables",
      "topics": [
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    },
    {
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      "title": "Laboratory Test Results Domain Supplemental Variables",
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    },
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      "title": "Medical History Domain Supplemental Variables",
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    {
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    {
      "page": "SUPPVS",
      "title": "Vital Signs Domain Supplemental Variables",
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    },
    {
      "page": "SUPPZA",
      "title": "Protein Quantification Domain Supplemental Variables",
      "topics": [
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    {
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      "title": "Cellular Quantification Domain Supplemental Variables",
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    {
      "page": "SUPPZC",
      "title": "Nucleic Acid Quantification Domain Supplemental Variables",
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      "title": "Titer Assay Results Domain Supplemental Variables",
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      "title": "Trial Design class",
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        "TrialDesign-class"
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    {
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      "title": "Trial Summary Domain Variables",
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      "title": "Vital Signs Domain",
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      "title": "Vital Signs Domain Variables",
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    },
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      "title": "Protein Quantification Domain Variables",
      "topics": [
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    },
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      "title": "Cellular Quantification Domain Variables",
      "topics": [
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    },
    {
      "page": "ZC",
      "title": "Nucleic Acid Quantification Domain Variables",
      "topics": [
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    },
    {
      "page": "ZD",
      "title": "Titer Assay Results Domain Variables",
      "topics": [
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    "DBI",
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  "_vignettes": [
    {
      "source": "RImmPort_Article.Rmd",
      "filename": "RImmPort_Article.html",
      "title": "RImmPort: Enabling ready-for-analysis immunology research data",
      "author": "Ravi Shankar",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Overview of ImmPort",
        "Overview of RImmPort",
        "Overview of CDISC SDTM Data Standard",
        "RImmPort Data Model",
        "RImmPort Study reference class",
        "Notes on Study reference class and its components",
        "RImmPort Functions",
        "Foundational Functions",
        "Load the RImmPort library",
        "Set the MySQL database as ImmPort data source",
        "Option 2: ImmPort SQLite database",
        "Download zip files of ImmPort data, in Tab format. e.g.'SDY139' and 'SDY208'",
        "Build a local SQLite ImmPort database instance.",
        "Set the SQLite database as ImmPort data source",
        "NOTE: In rest of this document, all RImmPort functions will use the SQLite ImmPort database as the ImmPort data source.",
        "Get all data of a specific study",
        "Get specific domain data of a specific study",
        "Search and Integrate Functions",
        "Get studies with specifc domain data",
        "Get specifc domain data of a set of studies",
        "Get the list of assay types",
        "Get specific assay data of one or more studies",
        "Utility functions",
        "Serialize study data in RImmPort format",
        "Load serialized study data into the R environment",
        "Build a private SQLite ImmPort database instance.",
        "Conclusion"
      ],
      "created": "2016-02-22 18:03:39",
      "modified": "2018-03-30 19:20:51",
      "commits": 3
    },
    {
      "source": "RImmPort_QuickStart.Rmd",
      "filename": "RImmPort_QuickStart.html",
      "title": "RImmPort: Quick Start Guide",
      "author": "Ravi Shankar",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Initial Steps",
        "Load the RImmPort library",
        "Setup ImmPort data source that all RImmPort functions will use",
        "Option 1: ImmPort MySQL database",
        "Download zip files of ImmPort study data in MySQL format. e.g.'SDY139' and 'SDY208'",
        "Load the data into a local MySQL database",
        "Connect to the ImmPort MySQL database.",
        "Set the data source as the ImmPort MySQL database.",
        "Option 2: ImmPort SQLite database",
        "Download zip files of ImmPort data, in Tab format. e.g.'SDY139' and 'SDY208'",
        "Build a local SQLite ImmPort database instance.",
        "Connect to the ImmPort SQLite database",
        "Set the data source to the ImmPort SQLite DB",
        "NOTE: In rest of the script, all RImmPort functions will use the SQLite ImmPort database as the data source.",
        "Get all study ids",
        "Get all data of a specific study",
        "Get the list of Domain names.",
        "Get list of studies with specifc domain data",
        "Get specifc domain data of one or more studies",
        "Get the list of assay types from ImmPort studies",
        "Get specific assay data of one or more Immport studies",
        "Serialize RImmPort-formatted study data as .rds files",
        "Load the serialzed data (.rds) files of a specific domain of a study from the directory where the files are located"
      ],
      "created": "2016-02-22 18:03:39",
      "modified": "2018-03-30 19:20:51",
      "commits": 3
    }
  ],
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  "_indexed": true,
  "_nocasepkg": "rimmport",
  "_universes": [
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  ],
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