{
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  "Package": "PscanRBackgrounds",
  "Type": "Package",
  "Title": "Precomputed Promoter Backgrounds for PscanR",
  "Version": "0.99.7",
  "Authors@R": "c(\nperson(\"Federico\", \"Zambelli\",\nemail = \"federico.zambelli@unimi.it\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-3487-4331\")),\nperson(\"Diana\", \"Betelli\", role = \"aut\",\ncomment = c(ORCID = \"0009-0007-6207-7715\")),\nperson(\"Giulio\", \"Pavesi\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-5705-6249\")),\nperson(\"Italy's National Recovery and Resilience Plan (PNRR)\",\nrole = \"fnd\", comment = \"project ELIXIRNextGenIT, R0000010\")\n)",
  "Description": "Provides ExperimentHub metadata and documentation for the\npromoter-background score distributions used by PscanR\ntranscription factor binding motif enrichment analyses. Each of\nthe 105 backgrounds is a separate ExperimentHub resource,\ncovering the JASPAR 2020, 2022 and 2024 CORE collections, seven\ngenome assemblies of five organisms, and five promoter windows.\nThe files are hosted on Zenodo, one record per JASPAR release,\nand archived together in a version-specific Zenodo record.",
  "License": "CC BY 4.0",
  "Encoding": "UTF-8",
  "biocViews": "ExperimentHub, Genome, Homo_sapiens_Data, Mus_musculus_Data,\nDrosophila_melanogaster_Data, Saccharomyces_cerevisiae_Data,\nArabidopsis_thaliana_Data",
  "VignetteBuilder": "knitr",
  "URL": "https://github.com/Federico77z/PscanRBackgrounds,\nhttps://doi.org/10.5281/zenodo.21821764",
  "BugReports": "https://github.com/Federico77z/PscanRBackgrounds/issues",
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  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-11-06 08:33:15 UTC",
  "RemoteUrl": "https://github.com/bioc/PscanRBackgrounds",
  "RemoteRef": "HEAD",
  "RemoteSha": "a2ca51db9fd6b3de2d534902125b885df19bb418",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-11-06 21:05:29 UTC",
    "User": "root"
  },
  "Author": "Federico Zambelli [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-3487-4331>),\nDiana Betelli [aut] (ORCID: <https://orcid.org/0009-0007-6207-7715>),\nGiulio Pavesi [aut] (ORCID: <https://orcid.org/0000-0001-5705-6249>),\nItaly's National Recovery and Resilience Plan (PNRR) [fnd] (project\nELIXIRNextGenIT, R0000010)",
  "Maintainer": "Federico Zambelli <federico.zambelli@unimi.it>",
  "_user": "bioc",
  "_type": "src",
  "_file": "PscanRBackgrounds_0.99.7.tar.gz",
  "_fileid": "https://r2.ropensci.org/cb3c7a0a3b37b19805cb6afdd13111dd1e3bc2cc43bb98cdd54072f5c89322f3",
  "_filesize": 123381,
  "_sha256": "cb3c7a0a3b37b19805cb6afdd13111dd1e3bc2cc43bb98cdd54072f5c89322f3",
  "_expires": "2027-02-14T21:13:01.000Z",
  "_created": "2026-11-06T21:05:29.000Z",
  "_published": "2026-11-06T21:13:03.261Z",
  "_upstream": "https://github.com/bioc/PscanRBackgrounds",
  "_status": "success",
  "_maintainer": {
    "name": "Federico Zambelli",
    "email": "federico.zambelli@unimi.it",
    "login": "federico77z",
    "orcid": "0000-0003-3487-4331",
    "description": "Associate Professor - Bioinformatics - University of Milan",
    "uuid": 36039850
  },
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  "_bioccheck": {
    "error": 0,
    "warning": 0,
    "note": 0
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  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/42293329244",
  "_commit": {
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    "author": "Federico77z <federico.zambelli@gmail.com>",
    "committer": "Federico77z <federico.zambelli@gmail.com>",
    "message": "Rebuild after the BiocFileCache 3.3.2 fix (0.99.7)\n\nBiocFileCache 3.3.1 made every ExperimentHub download fail\n(Bioconductor/BiocFileCache#73); 3.3.2 fixes it. Correct the 0.99.6\nNEWS entry, which called the failure transient, and remove the\ntemporary hub-watch workflow.\n",
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  "_owner": "bioc",
  "_selfowned": true,
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  "_updates": [
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  "_exports": [],
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      "page": "PscanRBackgrounds-resources",
      "title": "PscanR promoter backgrounds, version 2",
      "topics": [
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  "_readme": "https://github.com/bioc/PscanRBackgrounds/raw/HEAD/README.md",
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  "_vignettes": [
    {
      "source": "PscanRBackgrounds.Rmd",
      "filename": "PscanRBackgrounds.html",
      "title": "PscanR Background Resources",
      "author": "Federico Zambelli",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Installation",
        "Available resources",
        "Retrieval through ExperimentHub",
        "License and provenance",
        "Session information"
      ],
      "created": "2026-10-03 14:27:45",
      "modified": "2026-10-07 12:29:18",
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  "_indexed": true,
  "_nocasepkg": "pscanrbackgrounds",
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