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        "key": "ProtGenerics::generic:spectraVariables",
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        "key": "ProtGenerics::generic:supportsSetBackend",
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        "key": "ProtGenerics::generic:tolerance",
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        "key": "ProtGenerics::generic:uniqueMsLevels",
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    "extra/citation.json",
    "extra/citation.txt",
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    "extra/NEWS.html",
    "extra/NEWS.txt",
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    "analyserDetails",
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    "chromatogram",
    "chromatograms",
    "collisionEnergy",
    "collisionEnergy<-",
    "combineFeatures",
    "compareChromatograms",
    "compareSpectra",
    "compounds",
    "database",
    "dataOrigin",
    "dataOrigin<-",
    "dataStorage",
    "dataStorage<-",
    "detectorType",
    "estimatePrecursorIntensity",
    "executeProcessingStep",
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    "extractByIndex",
    "filterAcquisitionNum",
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    "filterDataStorage",
    "filterEmptySpectra",
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    "filterIsolationWindow",
    "filterMsLevel",
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    "filterMzRange",
    "filterMzValues",
    "filterNA",
    "filterPolarity",
    "filterPrecursorCharge",
    "filterPrecursorMz",
    "filterPrecursorMzRange",
    "filterPrecursorMzValues",
    "filterPrecursorScan",
    "filterProductMz",
    "filterProductMzRange",
    "filterProductMzValues",
    "filterRanges",
    "filterRt",
    "filterSpectra",
    "filterValues",
    "impute",
    "instrumentCustomisations",
    "instrumentManufacturer",
    "instrumentModel",
    "intensity",
    "intensity<-",
    "ionCount",
    "ions",
    "ionSource",
    "ionSourceDetails",
    "isCentroided",
    "isolationWindowLowerMz",
    "isolationWindowLowerMz<-",
    "isolationWindowTargetMz",
    "isolationWindowTargetMz<-",
    "isolationWindowUpperMz",
    "isolationWindowUpperMz<-",
    "isReadOnly",
    "mass",
    "modifications",
    "msInfo",
    "msLevel",
    "msLevel<-",
    "mz",
    "mz<-",
    "peaks",
    "peaks<-",
    "peaksData",
    "peaksData<-",
    "peaksVariables",
    "peptides",
    "polarity",
    "polarity<-",
    "precAcquisitionNum",
    "precScanNum",
    "precursorCharge",
    "precursorCharge<-",
    "precursorIntensity",
    "precursorIntensity<-",
    "precursorMz",
    "precursorMz<-",
    "processingChunkFactor",
    "processingChunkSize",
    "processingChunkSize<-",
    "processingData",
    "processingData<-",
    "ProcessingStep",
    "productMz",
    "productMz<-",
    "proteins",
    "psms",
    "quantify",
    "rtime",
    "rtime<-",
    "scanIndex",
    "scans",
    "setBackend",
    "smooth",
    "smoothed",
    "smoothed<-",
    "spectra",
    "spectra<-",
    "spectraData",
    "spectraData<-",
    "spectraNames",
    "spectraNames<-",
    "spectrapply",
    "spectraVariables",
    "supportsSetBackend",
    "tic",
    "tolerance",
    "uniqueMsLevels",
    "writeMSData"
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        "backendParallelFactor",
        "isReadOnly",
        "setBackend",
        "supportsSetBackend"
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      "page": "extractByIndex",
      "title": "Extracting elements by index",
      "topics": [
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    },
    {
      "page": "filterFeatures",
      "title": "Filter features",
      "topics": [
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      "page": "filterSpectra",
      "title": "Filter Spectra",
      "topics": [
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        "Param",
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        "show,Param-method"
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      "title": "Get or set MS peak data",
      "topics": [
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        "peaksData<-",
        "peaksVariables"
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      "page": "processingQueue",
      "title": "Processing Queue",
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        "processingChunkSize",
        "processingChunkSize<-",
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        "executeProcessingStep",
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        "show,ProcessingStep-method"
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    {
      "page": "protgenerics",
      "title": "S4 generic functions for Bioconductor proteomics infrastructure",
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