{
  "_id": "6aca1651fe5cc25786e84865",
  "Package": "PasillaTranscriptExpr",
  "Type": "Package",
  "Title": "Data package with transcript expression obtained with kallisto\nfrom pasilla knock-down RNA-Seq data from Brooks et al.",
  "Version": "1.41.0",
  "Date": "2016-02-17",
  "Authors@R": "c(person(given = \"Malgorzata\", family = \"Nowicka\", role =\nc(\"aut\", \"cre\"), email = \"gosia.nowicka@uzh.ch\"))",
  "Description": "Provides kallisto workflow and transcript expression of\nRNA-Seq data from Brooks et al.",
  "License": "GPL (>= 3)",
  "biocViews": "Drosophila_melanogaster_Data, Genome, RNASeqData,\nExperimentData, SequencingData, ExpressionData, GEO",
  "VignetteBuilder": "knitr",
  "NeedsCompilation": "no",
  "Author": "Malgorzata Nowicka [aut, cre]",
  "Maintainer": "Malgorzata Nowicka <gosia.nowicka@uzh.ch>",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:29:39 UTC",
  "RemoteUrl": "https://github.com/bioc/PasillaTranscriptExpr",
  "RemoteRef": "HEAD",
  "RemoteSha": "76ba8e48130c64205906368387cc1b10649b184d",
  "Packaged": {
    "Date": "2026-10-10 10:37:02 UTC",
    "User": "root"
  },
  "_user": "bioc",
  "_type": "src",
  "_file": "PasillaTranscriptExpr_1.41.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/1518e1fe3b1ba513636dd6b821891232b26c44a86395e3feed33485a298d3a9f",
  "_filesize": 853167,
  "_sha256": "1518e1fe3b1ba513636dd6b821891232b26c44a86395e3feed33485a298d3a9f",
  "_expires": "2027-01-18T10:41:16.000Z",
  "_created": "2026-10-10T10:37:02.000Z",
  "_published": "2026-10-10T10:41:21.012Z",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/38045330001",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_bioccheck": {
    "error": 0,
    "warning": 4,
    "note": 5
  },
  "_upstream": "https://github.com/bioc/PasillaTranscriptExpr",
  "_commit": {
    "id": "76ba8e48130c64205906368387cc1b10649b184d",
    "author": "lshep <lori.shepherd@roswellpark.org>",
    "committer": "lshep <lori.shepherd@roswellpark.org>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379379
  },
  "_maintainer": {
    "name": "Malgorzata Nowicka",
    "email": "gosia.nowicka@uzh.ch"
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 114194183939,
      "time": 127,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "11667673358"
    },
    {
      "job": 114194183966,
      "time": 220,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11667054374"
    },
    {
      "job": 114194183903,
      "time": 171,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11667353820"
    },
    {
      "job": 114193641491,
      "time": 191,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11667623182"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.3.0",
      "role": "Depends"
    },
    {
      "package": "rtracklayer",
      "role": "Suggests"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.41.0",
      "bioc": "3.24",
      "repository": "data/experiment"
    },
    {
      "branch": "release",
      "version": "1.40.0",
      "bioc": "3.23",
      "repository": "data/experiment"
    }
  ],
  "_topics": [
    "drosophila_melanogaster_data",
    "genome",
    "rnaseqdata",
    "experimentdata",
    "sequencingdata",
    "expressiondata",
    "geo",
    "datapkg"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 476,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_searchresults": 46,
  "_datapkg": true,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/PasillaTranscriptExpr.html",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_cranurl": false,
  "_exports": [],
  "_help": [],
  "_readme": "https://github.com/bioc/PasillaTranscriptExpr/raw/HEAD/README.md",
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "PasillaTranscriptExpr.Rnw",
      "filename": "PasillaTranscriptExpr.pdf",
      "title": "Generation of transcript counts from pasilla dataset with kallisto",
      "engine": "knitr::knitr",
      "headings": [
        "1 Description of pasilla dataset",
        "2 Required software",
        "3 Downloading the pasilla data",
        "4 Downloading the reference genome",
        "5 Transcript quantification with kallisto",
        "APPENDIX",
        "A Session information",
        "B References"
      ],
      "created": "2016-03-29 19:55:50",
      "modified": "2016-03-29 19:55:50",
      "commits": 1
    }
  ],
  "_score": 4.662757831681574,
  "_indexed": true,
  "_nocasepkg": "pasillatranscriptexpr",
  "_universes": [
    "bioc"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.41.0",
      "date": "2026-10-10T10:40:46.000Z",
      "distro": "resolute",
      "commit": "76ba8e48130c64205906368387cc1b10649b184d",
      "fileid": "https://r2.ropensci.org/b6fbeeafa79811d8e2ec12104806a2ccacaab0ddcad1d42bfa07b87fbd2be03a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045330001"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.41.0",
      "date": "2026-10-10T10:39:56.000Z",
      "distro": "resolute",
      "commit": "76ba8e48130c64205906368387cc1b10649b184d",
      "fileid": "https://r2.ropensci.org/fe066c8f9a94a8fcbb6f7e0116286068efe6b863e8c04214206733c9f7d30348",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045330001"
    }
  ]
}