{ "_id": "6abe496299f7aa8c6aa54d6b", "Package": "PLPE", "Version": "1.73.0", "Date": "2009-07-22", "Title": "Local Pooled Error Test for Differential Expression with Paired\nHigh-throughput Data", "Author": "HyungJun Cho and Jae K. Lee\n", "Maintainer": "Soo-heang Eo ", "Description": "This package performs tests for paired high-throughput\ndata.", "biocViews": "Proteomics, Microarray, DifferentialExpression", "LazyLoad": "yes", "LazyData": "yes", "License": "GPL (>= 2)", "URL": "http://www.korea.ac.kr/~stat2242/", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:33:09 UTC", "RemoteUrl": "https://github.com/bioc/PLPE", "RemoteRef": "HEAD", "RemoteSha": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-01 11:39:56 UTC", "User": "root" }, "_user": "bioc", "_type": "src", "_file": "PLPE_1.73.0.tar.gz", "_fileid": "https://r2.ropensci.org/913eab1dfa83f5be4163165be9b94587238091942daa4ef27fac803f08d7b229", "_filesize": 252681, "_sha256": "913eab1dfa83f5be4163165be9b94587238091942daa4ef27fac803f08d7b229", "_expires": "2027-01-09T11:52:00.000Z", "_created": "2026-10-01T11:39:56.000Z", "_published": "2026-10-01T11:52:02.634Z", "_bioccheck": { "error": 2, "warning": 5, "note": 12 }, "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098", "_status": "success", "_upstream": "https://github.com/bioc/PLPE", "_commit": { "id": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777379589 }, "_maintainer": { "name": "Soo-heang Eo", "email": "hanansh@korea.ac.kr", "login": "hanansh", "description": "", "uuid": 5784713 }, "_distro": "resolute", "_jobs": [ { "job": 110351171132, "time": 139, "config": "bioc-checks", "r": "4.6.1", "check": "ERROR", "artifact": "11158809195" }, { "job": 110351171086, "time": 200, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11159179098" }, { "job": 110351171102, "time": 213, "config": "linux-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11159243618" }, { "job": 110351171098, "time": 97, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "11159675663" }, { "job": 110351171185, "time": 125, "config": "macos-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "11159495927" }, { "job": 110349620294, "time": 269, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11159243014" }, { "job": 110351171024, "time": 102, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11158704042" }, { "job": 110351171227, "time": 72, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11159183747" }, { "job": 110351171107, "time": 67, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "11158453927" }, { "job": 110351171091, "time": 72, "config": "windows-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11158778945" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.6.2", "role": "Depends" }, { "package": "Biobase", "version": ">= 2.5.5", "role": "Depends" }, { "package": "LPE", "role": "Depends" }, { "package": "MASS", "role": "Depends" }, { "package": "methods", "role": "Depends" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.73.0", "bioc": "3.24" }, { "branch": "release", "version": "1.72.0", "bioc": "3.23" } ], "_topics": [ "proteomics", "microarray", "differentialexpression" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 471, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 508, "source": "https://www.bioconductor.org/packages/stats/bioc/PLPE" }, "_searchresults": 2, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/PLPE.html" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "am.trans.paired", "base.error.paired", "generate.null", "lpe.paired", "lpe.paired.default", "lpe.paired.fdr", "lpe.paired.fdr.default", "print.lpe.paired", "print.lpe.paired.fdr", "summary.lpe.paired", "summary.lpe.paired.fdr" ], "_datasets": [ { "name": "plateletSet", "title": "LCMS proteomic data for platelte MPs", "object": "plateletSet", "class": [ "ExpressionSet" ], "fields": [], "table": false, "tojson": false } ], "_help": [ { "page": "lpe.paired", "title": "Local Pooled Error Test for Paired Data", "topics": [ "lpe.paired" ] }, { "page": "lpe.paired.default", "title": "Local Pooled Error Test for Paired Data", "topics": [ "lpe.paired.default" ] }, { "page": "lpe.paired.fdr", "title": "FDR for PLPE", "topics": [ "lpe.paired.fdr" ] }, { "page": "lpe.paired.fdr.default", "title": "FDR for PLPE", "topics": [ "lpe.paired.fdr.default" ] }, { "page": "plateletSet", "title": "LCMS proteomic data for platelte MPs", "topics": [ "plateletSet" ] } ], "_rundeps": [ "Biobase", "BiocGenerics", "generics", "LPE", "MASS" ], "_vignettes": [ { "source": "PLPE.Rnw", "filename": "PLPE.pdf", "title": "PLPE Overview", "engine": "utils::Sweave", "headings": [ "Introduction", "Methods", "Example" ], "created": "2013-11-01 20:05:04", "modified": "2019-12-23 23:14:37", "commits": 2 } ], "_score": 3.3010299956639813, "_indexed": true, "_nocasepkg": "plpe", "_universes": [ "bioc", "hanansh" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.73.0", "date": "2026-10-01T11:43:16.000Z", "distro": "resolute", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/f2a4e21cbf62b9f5f5db1c92498a4979bfabf0b6a793b2893c90a654d7f2ae1c", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" }, { "r": "4.6.1", "os": "linux", "version": "1.73.0", "date": "2026-10-01T11:43:34.000Z", "distro": "resolute", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/2082841976d06c6a90e2d5b6f9c3c3e70e65dc47a861dda45ced983179911c63", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" }, { "r": "4.5.3", "os": "mac", "version": "1.73.0", "date": "2026-10-01T11:50:44.000Z", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/472ca55238dfb94e3385a9c89587398cd87a5ef5bf54432e9ba4cf47413b7631", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" }, { "r": "4.6.1", "os": "mac", "version": "1.73.0", "date": "2026-10-01T11:51:14.000Z", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/75b15cfc5f35e728138ffb1296503b31b5815fd23fe9c02bcff1d1327d22fddd", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" }, { "r": "4.6.0", "os": "wasm", "version": "1.73.0", "date": "2026-10-01T11:41:55.000Z", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/96bb0024442fe6695dc17c5b5bb85aa3bda7283f90f5e72c3ba21e4cd9494a29", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" }, { "r": "4.7.0", "os": "win", "version": "1.73.0", "date": "2026-10-01T11:41:08.000Z", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/6692322ecac595a20902ef1fe9120c8bdeb555a18628c628f537087b81c060b7", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" }, { "r": "4.5.3", "os": "win", "version": "1.73.0", "date": "2026-10-01T11:41:00.000Z", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/091392f5b6988e68f9bfd1d021d593cb3414801a6d0e9b9a4e2be52d617070a4", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" }, { "r": "4.6.1", "os": "win", "version": "1.73.0", "date": "2026-10-01T11:41:04.000Z", "commit": "774be2669cfca1d491ca4b08741647ff8ac3d0ec", "fileid": "https://r2.ropensci.org/ba18b5161e6c9fd555630450eaccc696ce7dde64445a3da49f8821ce38c989a2", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/36856293098" } ] }