{ "_id": "6a497c2c6d67900babdf7369", "Package": "OUTRIDER", "Title": "OUTRIDER - OUTlier in RNA-Seq fInDER", "Type": "Package", "Version": "1.31.0", "Date": "2026-02-10", "URL": "https://github.com/gagneurlab/OUTRIDER", "BugReports": "https://github.com/gagneurlab/OUTRIDER/issues", "Authors@R": "c(\nperson(\"Felix\", \"Brechtmann\", role=c(\"aut\"),\nemail=\"brechtma@in.tum.de\", comment=c(ORCID=\"0000-0002-0110-152X\")),\nperson(\"Christian\", \"Mertes\", role=c(\"aut\", \"cre\"),\nemail=\"mertes@in.tum.de\", comment=c(ORCID=\"0000-0002-1091-205X\")),\nperson(\"Agne\", \"Matuseviciute\", role=c(\"aut\")),\nperson(c(\"Michaela\", \"Fee\"), \"Müller\", role=c(\"ctb\")),\nperson(\"Andrea\", \"Raithel\", role=c(\"ctb\")),\nperson(\"Vicente\", \"Yepez\", role=c(\"aut\"), email=\"yepez@in.tum.de\",\ncomment=c(ORCID=\"0000-0001-7916-3643\")),\nperson(\"Julien\", \"Gagneur\", role=c(\"aut\"), email=\"gagneur@in.tum.de\",\ncomment=c(ORCID=\"0000-0002-8924-8365\")))", "Description": "Identification of aberrant gene expression in RNA-seq\ndata. Read count expectations are modeled by an autoencoder to\ncontrol for confounders in the data. Given these expectations,\nthe RNA-seq read counts are assumed to follow a negative\nbinomial distribution with a gene-specific dispersion. Outliers\nare then identified as read counts that significantly deviate\nfrom this distribution. Furthermore, OUTRIDER provides useful\nplotting functions to analyze and visualize the results.", "VignetteBuilder": "knitr", "biocViews": "ImmunoOncology, RNASeq, Transcriptomics, Alignment,\nSequencing, GeneExpression, Genetics", "License": "file LICENSE", "NeedsCompilation": "yes", "Encoding": "UTF-8", "RoxygenNote": "7.3.2", "Collate": "package-OUTRIDER.R class-OutriderDataSet.R AllGenerics.R\ninputCheckerFunctions.R helperFunctions.R getNSetterFuns.R\ngetNSetterFunsInternal.R autoencoder.R fitNB.R ZscoreMatrix.R\nmethod-evaluation.R method-counts.R method-estimateBestQ.R\nmethod-plot.R method-results.R pValMatrix.R filterExpression.R\nOUTRIDER.R sizeFactor.R RcppExports.R updateE.R updateD.R\nupdateTheta.R PCAcorrections.R thetaMethodOfMoments.R\ncontrolForConfounders.R lossNGradientRVersion.R", "Config/pak/sysreqs": "cmake make libmagick++-dev gsfonts libbz2-dev\nlibicu-dev liblzma-dev libpng-dev libuv1-dev libxml2-dev\nlibssl-dev xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:48:19 UTC", "RemoteUrl": "https://github.com/bioc/OUTRIDER", "RemoteRef": "HEAD", "RemoteSha": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "Packaged": { "Date": "2026-06-23 19:21:39 UTC", "User": "root" }, "Author": "Felix Brechtmann [aut] (ORCID: ),\nChristian Mertes [aut, cre] (ORCID:\n),\nAgne Matuseviciute [aut],\nMichaela Fee Müller [ctb],\nAndrea Raithel [ctb],\nVicente Yepez [aut] (ORCID: ),\nJulien Gagneur [aut] (ORCID: )", "Maintainer": "Christian Mertes ", "_user": "bioc", "_type": "src", "_file": "OUTRIDER_1.31.0.tar.gz", "_fileid": "https://r2.ropensci.org/26ec81522642e18d83ef85562cbf34b3933aa209032a62a621ba3048908ae9de", "_filesize": 3363320, "_sha256": "26ec81522642e18d83ef85562cbf34b3933aa209032a62a621ba3048908ae9de", "_expires": "2026-10-12T21:33:30.000Z", "_created": "2026-06-23T19:21:39.000Z", "_published": "2026-07-04T21:33:32.221Z", "_bioccheck": { "error": 0, "warning": 3, "note": 13 }, "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455", "_status": "success", "_upstream": "https://github.com/bioc/OUTRIDER", "_commit": { "id": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777380499 }, "_maintainer": { "name": "Christian Mertes", "email": "mertes@in.tum.de", "login": "c-mertes", "description": "bioinformatics @gagneurlab, rare diseases, volleyball", "uuid": 22544249, "orcid": "0000-0002-1091-205X" }, "_distro": "resolute", "_jobs": [ { "job": 85168751398, "time": 289, "config": "bioc-checks", "r": "4.6.0", "check": "WARNING", "artifact": "7831219362" }, { "job": 85168751388, "time": 471, "config": "linux-devel-arm64", "r": "4.7.0", "check": "NOTE", "artifact": "7831290278" }, { "job": 85168751409, "time": 572, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7831329044" }, { "job": 85168751460, "time": 494, "config": "linux-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7831298976" }, { "job": 85168751403, "time": 635, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7831351823" }, { "job": 85168751453, "time": 418, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7831490098" }, { "job": 85168751402, "time": 823, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "7831564752" }, { "job": 85168751423, "time": 449, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7831504678" }, { "job": 85168751412, "time": 752, "config": "macos-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7831521499" }, { "job": 85168751379, "time": 597, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7831111187" }, { "job": 85168751374, "time": 303, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7831224138" }, { "job": 85168751391, "time": 676, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7831367961" }, { "job": 85168751474, "time": 937, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7831467279" }, { "job": 85168751433, "time": 692, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7831372795" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.6", "role": "Depends" }, { "package": "BiocParallel", "role": "Depends" }, { "package": "GenomicFeatures", "role": "Depends" }, { "package": "SummarizedExperiment", "role": "Depends" }, { "package": "methods", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "BBmisc", "role": "Imports" }, { "package": "BiocGenerics", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "DESeq2", "version": ">= 1.16.1", "role": "Imports" }, { "package": "generics", "role": "Imports" }, { "package": "GenomicRanges", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "ggrepel", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "grDevices", "role": "Imports" }, { "package": "heatmaply", "role": "Imports" }, { "package": "IRanges", "role": "Imports" }, { "package": "matrixStats", "role": "Imports" }, { "package": "pcaMethods", "role": "Imports" }, { "package": "pheatmap", "role": "Imports" }, { "package": "plotly", "role": "Imports" }, { "package": "plyr", "role": "Imports" }, { "package": "pracma", "role": "Imports" }, { "package": "PRROC", "role": "Imports" }, { "package": "RColorBrewer", "role": "Imports" }, { "package": "reshape2", "role": "Imports" }, { "package": "RMTstat", "role": "Imports" }, { "package": "S4Vectors", "role": "Imports" }, { "package": "scales", "role": "Imports" }, { "package": "splines", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "txdbmaker", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "testthat", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "TxDb.Hsapiens.UCSC.hg19.knownGene", "role": "Suggests" }, { "package": "org.Hs.eg.db", "role": "Suggests" }, { "package": "RMariaDB", "role": "Suggests" }, { "package": "AnnotationDbi", "role": "Suggests" }, { "package": "beeswarm", "role": "Suggests" }, { "package": "covr", "role": "Suggests" }, { "package": "GenomeInfoDb", "role": "Suggests" }, { "package": "ggbio", "role": "Suggests" }, { "package": "biovizBase", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2025-31", "n": 1 }, { "week": "2025-43", "n": 4 }, { "week": "2026-07", "n": 3 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.31.0", "bioc": "3.24" }, { "branch": "release", "version": "1.30.0", "bioc": "3.23" } ], "_topics": [ "immunooncology", "rnaseq", "transcriptomics", "alignment", "sequencing", "geneexpression", "genetics", "count-data", "diagnostics", "expression-analysis", "mendelian-genetics", "outlier-detection", "rna-seq", "openblas", "cpp" ], "_stars": 57, "_contributors": [ { "user": "c-mertes", "count": 311, "uuid": 22544249 }, { "user": "brechtmann", "count": 141, "uuid": 37140213 }, { "user": "vyepez88", "count": 16, "uuid": 30469316 }, { "user": "ischeller", "count": 15, "uuid": 56256384 }, { "user": "nturaga", "count": 14, "uuid": 2746443 }, { "user": "jwokaty", "count": 14, "uuid": 1744257 }, { "user": "atajadidahari", "count": 11, "uuid": 24277411 }, { "user": "nickhsmith", "count": 11, "uuid": 7143411 }, { "user": "andrearaithel", "count": 7, "uuid": 133764907 }, { "user": "link-ny", "count": 2, "uuid": 4392950 }, { "user": "vobencha", "count": 2, "uuid": 2466173 }, { "user": "hpages", "count": 2, "uuid": 8810451 }, { "user": "kayla-morrell", "count": 1, "uuid": 32339524 }, { "user": "mumichae", "count": 1, "uuid": 51025211 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 441, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_mentions": 3, "_devurl": "https://github.com/gagneurlab/outrider", "_searchresults": 160, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/OUTRIDER.html", "extra/readme.html", "extra/readme.md", "LICENSE", "manual.pdf" ], "_homeurl": "https://github.com/gagneurlab/outrider", "_realowner": "bioc", "_cranurl": false, "_exports": [ "aberrant", "computeGeneLength", "computeLatentSpace", "computePvalues", "computeZscores", "controlForConfounders", "counts", "counts<-", "dispersions", "estimateBestQ", "estimateSizeFactors", "filterExpression", "findInjectZscore", "fit", "fpkm", "fpm", "getBestQ", "makeExampleOutriderDataSet", "normalizationFactors", "normalizationFactors<-", "OUTRIDER", "OutriderDataSet", "padj", "plotAberrantPerSample", "plotCountCorHeatmap", "plotCountGeneSampleHeatmap", "plotDispEsts", "plotEncDimSearch", "plotExpectedVsObservedCounts", "plotExpressedGenes", "plotExpressionRank", "plotFPKM", "plotManhattan", "plotPowerAnalysis", "plotQQ", "plotSizeFactors", "plotVolcano", "pValue", "results", "sampleExclusionMask", "sampleExclusionMask<-", "sizeFactors", "sizeFactors<-", "theta", "zScore" ], "_help": [ { "page": "aberrant", "title": "Number of aberrant events", "topics": [ "aberrant", "aberrant,OutriderDataSet-method" ] }, { "page": "computeGeneLength", "title": "Extracting the gene length from annotations", "topics": [ "computeGeneLength" ] }, { "page": "computeLatentSpace", "title": "Extracting the latent space", "topics": [ "computeLatentSpace" ] }, { "page": "computePvalues", "title": "Calculate P-values", "topics": [ "computePvalues", "computePvalues,OutriderDataSet-method" ] }, { "page": "computeZscores", "title": "Z score computation", "topics": [ "computeZscores", "computeZscores,OutriderDataSet-method" ] }, { "page": "controlForConfounders", "title": "Autoencoder function to correct for confounders.", "topics": [ "controlForConfounders" ] }, { "page": "counts", "title": "Accessors for the 'counts' slot of an OutriderDataSet object.", "topics": [ "counts", "counts,OutriderDataSet-method", "counts<-,OutriderDataSet,matrix-method" ] }, { "page": "estimateBestQ", "title": "Find the optimal encoding dimension", "topics": [ "estimateBestQ", "estimateBestQ,", "findInjectZscore" ] }, { "page": "filterExpression", "title": "Filter expression", "topics": [ "filterExpression", "filterExpression,OutriderDataSet-method" ] }, { "page": "fit", "title": "Fit the negative binomial distribution", "topics": [ "fit", "fit.OutriderDataSet" ] }, { "page": "fpkm", "title": "Calculate FPM and FPKM values", "topics": [ "fpkm", "fpm" ] }, { "page": "getter_setter_functions", "title": "Getter/Setter functions", "topics": [ "dispersion,", "dispersions", "dispersions,OutriderDataSet-method", "getBestQ", "getter_setter_functions", "padj", "padj,", "pValue", "pValue,", "theta", "theta,", "zScore", "zScore," ] }, { "page": "makeExampleOutriderDataSet", "title": "Create example data sets for OUTRIDER", "topics": [ "makeExampleOutriderDataSet" ] }, { "page": "normalizationFactors", "title": "Accessor functions for the normalization factors in an OutriderDataSet object.", "topics": [ "normalizationFactors", "normalizationFactors,OutriderDataSet-method", "normalizationFactors<-,OutriderDataSet,data.frame-method", "normalizationFactors<-,OutriderDataSet,DataFrame-method", "normalizationFactors<-,OutriderDataSet,matrix-method", "normalizationFactors<-,OutriderDataSet,NULL-method" ] }, { "page": "OUTRIDER", "title": "OUTRIDER - Finding expression outlier events", "topics": [ "OUTRIDER" ] }, { "page": "OutriderDataSet-class", "title": "OutriderDataSet class and constructors", "topics": [ "OutriderDataSet", "OutriderDataSet-class" ] }, { "page": "plotFunctions", "title": "Visualization functions for OUTRIDER", "topics": [ "plotAberrantPerSample", "plotAberrantPerSample,OutriderDataSet-method", "plotCountCorHeatmap", "plotCountCorHeatmap,OutriderDataSet-method", "plotCountGeneSampleHeatmap", "plotDispEsts", "plotDispEsts,OutriderDataSet-method", "plotEncDimSearch", "plotEncDimSearch,OutriderDataSet-method", "plotExpectedVsObservedCounts", "plotExpressedGenes", "plotExpressionRank", "plotFPKM", "plotFunction", "plotFunctions", "plotManhattan", "plotManhattan,OutriderDataSet-method", "plotPowerAnalysis", "plotQQ", "plotQQ,OutriderDataSet-method", "plotSizeFactors", "plotVolcano", "plotVolcano,OutriderDataSet-method" ] }, { "page": "results", "title": "Accessor function for the 'results' object in an OutriderDataSet object.", "topics": [ "results", "results,OutriderDataSet-method" ] }, { "page": "sampleExclusionMask", "title": "Sample exclusion", "topics": [ "sampleExclusionMask", "sampleExclusionMask,", "sampleExclusionMask<-", "`sampleExclusionMask<-`" ] }, { "page": "sizeFactors", "title": "SizeFactors accessor and estimation function", "topics": [ "estimateSizeFactors", "estimateSizeFactors,OutriderDataSet-method", "sizeFactors", "sizeFactors,OutriderDataSet-method", "sizeFactors<-", "sizeFactors<-,OutriderDataSet,NULL-method", "sizeFactors<-,OutriderDataSet,numeric-method" ] } ], "_readme": "https://github.com/bioc/OUTRIDER/raw/HEAD/README.md", "_rundeps": [ "abind", "AnnotationDbi", "askpass", "assertthat", "backports", "base64enc", "BBmisc", "BH", "Biobase", "BiocBaseUtils", "BiocFileCache", "BiocGenerics", "BiocIO", "BiocParallel", "biomaRt", "Biostrings", "bit", "bit64", "bitops", "blob", "bslib", "ca", "cachem", "callr", "checkmate", "cigarillo", "cli", "cluster", "codetools", "colorspace", "cpp11", "crayon", "crosstalk", "curl", "data.table", "DBI", "dbplyr", "DelayedArray", "dendextend", "DESeq2", "digest", "dplyr", "egg", "evaluate", "farver", "fastmap", "filelock", "fontawesome", "foreach", "formatR", "fs", "futile.logger", "futile.options", "gclus", "generics", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggrepel", "glue", "gridExtra", "gtable", "heatmaply", "highr", "hms", "htmltools", "htmlwidgets", "httr", "httr2", "IRanges", "isoband", "iterators", "jquerylib", "jsonlite", "KEGGREST", "knitr", "labeling", "lambda.r", "later", "lattice", "lazyeval", "lifecycle", "locfit", "magrittr", "MASS", "Matrix", "MatrixGenerics", "matrixStats", "memoise", "mgcv", "mime", "nlme", "openssl", "otel", "pcaMethods", "permute", "pheatmap", "pillar", "pkgconfig", "plotly", "plyr", "png", "pracma", "prettyunits", "processx", "progress", "promises", "PRROC", "ps", "purrr", "qap", "R6", "rappdirs", "RColorBrewer", "Rcpp", "RcppArmadillo", "RCurl", "registry", "reshape2", "restfulr", "Rhtslib", "rjson", "rlang", "rmarkdown", "RMTstat", "Rsamtools", "RSQLite", "rtracklayer", "S4Arrays", "S4Vectors", "S7", "sass", "scales", "Seqinfo", "seriation", "snow", "SparseArray", "stringi", "stringr", "SummarizedExperiment", "sys", "tibble", "tidyr", "tidyselect", "tinytex", "TSP", "txdbmaker", "UCSC.utils", "utf8", "vctrs", "vegan", "viridis", "viridisLite", "webshot", "withr", "xfun", "XML", "xml2", "XVector", "yaml" ], "_sysdeps": [ { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.32+ds-5", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "OUTRIDER.Rnw", "filename": "OUTRIDER.pdf", "title": "OUTRIDER: OUTlier in RNA-seq fInDER", "engine": "knitr::knitr", "headings": [ "1 Introduction", "2 Prerequisites", "3 A quick tour", "4 An OUTRIDER analysis in detail", "5 Results", "6 Additional features", "References" ], "created": "2018-03-26 06:15:02", "modified": "2025-05-20 08:34:31", "commits": 32 } ], "_score": 9.32921069573856, "_indexed": true, "_nocasepkg": "outrider", "_universes": [ "bioc", "c-mertes", "gagneurlab" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.31.0", "date": "2026-06-23T19:26:39.000Z", "distro": "resolute", "arch": "aarch64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/4b9a80a9f7af29b8ffae0f2856fc502632019222115132150b22a405ad25d5da", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.7.0", "os": "linux", "version": "1.31.0", "date": "2026-06-23T19:27:02.000Z", "distro": "resolute", "arch": "x86_64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/f735833932551331df81cd2267669ce67c79e987259a15a46da53e7de6e993c0", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.6.0", "os": "linux", "version": "1.31.0", "date": "2026-06-23T19:26:39.000Z", "distro": "resolute", "arch": "aarch64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/db960a5797ac70636069e9abd3009e0a7bd887fccea3c8e39cbaf9214e68e014", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.6.0", "os": "linux", "version": "1.31.0", "date": "2026-06-23T19:27:29.000Z", "distro": "resolute", "arch": "x86_64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/8852ee332c1fad09af14f166c49395097a7397673fa77422ddcb87f104b7040a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.5.3", "os": "mac", "version": "1.31.0", "date": "2026-06-23T19:34:40.000Z", "arch": "aarch64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/8ffd0a98315622e889b7642f2ddd2ca1b81c5de65dfb8ff9ad6b02b277a16fd0", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.5.3", "os": "mac", "version": "1.31.0", "date": "2026-06-23T19:33:30.000Z", "arch": "x86_64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/e0163631defe711a0f4d8ebf468f4c2bcfa2ae550bf28b5a22c1db895ffb6fc9", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.6.0", "os": "mac", "version": "1.31.0", "date": "2026-06-23T19:34:52.000Z", "arch": "aarch64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/9c739d81da22fa96fb55409d7e95529e9babe146793bd796a553a277b4b04659", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.6.0", "os": "mac", "version": "1.31.0", "date": "2026-06-23T19:33:08.000Z", "arch": "x86_64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/ff4a4100fb6be4ae128e60a7b5aed2f24b34235d0f2930f84fe1d5753b7b76fe", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.6.0", "os": "wasm", "version": "1.31.0", "date": "2026-06-23T19:27:37.000Z", "arch": "emscripten", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/be7b8a3ab5d7b1d17a3c8d850f6b58b47da9ffe15a4d171576f24efb0012e686", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.7.0", "os": "win", "version": "1.31.0", "date": "2026-06-23T19:24:55.000Z", "arch": "x86_64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/d3f200186a942c5620e90b546d80627485f6145c5bfe42fd1f2b3f077748531b", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.5.3", "os": "win", "version": "1.31.0", "date": "2026-06-23T19:28:18.000Z", "arch": "x86_64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/82d2a6fd6cb9a83741e2ce49e3e3678dbd32aa22781bfcf7de883bcfd7da34f7", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" }, { "r": "4.6.0", "os": "win", "version": "1.31.0", "date": "2026-06-23T19:25:00.000Z", "arch": "x86_64", "commit": "f5f7a6b9de4cae9b2f5f80e877348c3b4dda37ab", "fileid": "https://r2.ropensci.org/87b064c7e0b84e903fe53f3e44c5e794849ec8274b99ce6e0ce87fa707dca0e5", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/28050542455" } ] }