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Functions include importing the\nmutation lists provided by a variant caller, and a set of\nanalytical tools for statistical testing and visualization of\nmutation data; comparison to COSMIC and/or germline signatures;\netc.", "License": "MIT + file LICENSE", "biocViews": "Sequencing, SomaticMutation, Visualization,\nGenomicVariation, DriverMutation, StatisticalMethod, GeneTarget", "VignetteBuilder": "knitr", "Config/reticulate": "list( packages = list( list(package =\n\"SigProfilerAssignment\"), list(package =\n\"SigProfilerExtractor\"), list(package =\n\"SigProfilerMatrixGenerator\") ) )", "Config/testthat/edition": "3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "BugReports": "https://github.com/EHSRB-BSRSE-Bioinformatics/MutSeqR/issues", "URL": "https://ehsrb-bsrse-bioinformatics.github.io/MutSeqR/", "Config/pak/sysreqs": "make libbz2-dev libicu-dev liblzma-dev libpng-dev\nlibxml2-dev libssl-dev xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 13:06:12 UTC", "RemoteUrl": "https://github.com/bioc/MutSeqR", "RemoteRef": "HEAD", "RemoteSha": "99d54af33c2e9ac45b8928eecca49f089630ad3c", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-31 10:47:28 UTC", "User": "root" }, "Author": "Annette E. 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