{ "_id": "6ae057505d0f7c3164ef6e1a", "Package": "MungeSumstats", "Type": "Package", "Title": "Standardise summary statistics from GWAS", "Version": "1.21.2", "Authors@R": "c(person(given = \"Alan\",\nfamily = \"Murphy\",\nrole = c(\"aut\",\"cre\"),\nemail = \"alanmurph94@hotmail.com\",\ncomment = c(ORCID = \"0000-0002-2487-8753\")),\nperson(given = \"Brian\",\nfamily = \"Schilder\",\nrole = c(\"aut\",\"ctb\"),\nemail = \"brian_schilder@alumni.brown.edu\",\ncomment = c(ORCID = \"0000-0001-5949-2191\")),\nperson(given = \"Nathan\",\nfamily = \"Skene\",\nrole = c(\"aut\"),\nemail = \"nathan.skene@gmail.com\",\ncomment = c(ORCID = \"0000-0002-6807-3180\")))", "Description": "The *MungeSumstats* package is designed to facilitate the\nstandardisation of GWAS summary statistics. It reformats\ninputted summary statisitics to include SNP, CHR, BP and can\nlook up these values if any are missing. It also pefrorms\ndozens of QC and filtering steps to ensure high data quality\nand minimise inter-study differences.", "URL": "https://github.com/neurogenomics/MungeSumstats,\nhttps://al-murphy.github.io/MungeSumstats/", "BugReports": "https://github.com/neurogenomics/MungeSumstats/issues", "License": "Artistic-2.0", "biocViews": "SNP, WholeGenome, Genetics, ComparativeGenomics,\nGenomeWideAssociation, GenomicVariation, Preprocessing", "RoxygenNote": "7.3.2", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "make libbz2-dev libicu-dev liblzma-dev libpng-dev\nlibxml2-dev libssl-dev xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-10-26 20:27:44 UTC", "RemoteUrl": "https://github.com/bioc/MungeSumstats", "RemoteRef": "HEAD", "RemoteSha": "d6e2b5888120a43e4e159866ba81c77b2b5e3267", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-27 06:42:42 UTC", "User": "root" }, "Author": "Alan Murphy [aut, cre] (ORCID: ),\nBrian Schilder [aut, ctb] (ORCID:\n),\nNathan Skene [aut] (ORCID: )", "Maintainer": "Alan Murphy ", "_user": "bioc", "_type": "src", "_file": "MungeSumstats_1.21.2.tar.gz", "_fileid": "https://r2.ropensci.org/c5768c91efcc99c57c446549f5aef88bde1b6a51926f33295b3ae8581e1d04dd", "_filesize": 2102031, "_sha256": "c5768c91efcc99c57c446549f5aef88bde1b6a51926f33295b3ae8581e1d04dd", "_expires": "2027-02-04T07:48:30.000Z", "_created": "2026-10-27T06:42:42.000Z", "_published": "2026-10-28T07:25:27.086Z", "_upstream": "https://github.com/bioc/MungeSumstats", "_status": "failure", "_maintainer": { "name": "Alan Murphy", "email": "alanmurph94@hotmail.com", "login": "al-murphy", "twitter": "@Al_Murphy_", "description": "Postdoctoral Research Scientist, Koo lab at CSHL | Deep Learning for genomics", "uuid": 62257358, "orcid": "0000-0002-2487-8753" }, "_jobs": [ { "job": 122051090544, "time": 399, "config": "bioc-checks", "r": "4.6.1", "check": "WARNING", "artifact": "12714539599" }, { "job": 122051090558, "time": 984, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "12716385506" }, { "job": 122051090662, "time": 1136, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "12715389160" }, { "job": 122051090626, "time": 3880, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "FAIL", "artifact": "" }, { "job": 122051090578, "time": 3041, "config": "macos-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "12717177309" }, { "job": 122048452781, "time": 500, "config": "source", "r": "4.6.1", "check": "ERROR", "artifact": "12715490567" }, { "job": 122051090748, "time": 303, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12715496365" }, { "job": 122051090630, "time": 809, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "12715981306" }, { "job": 122051090555, "time": 838, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "ERROR", "artifact": "12715339299" }, { "job": 122051090600, "time": 619, "config": "windows-release-x86_64", "r": "4.6.1", "check": "ERROR", "artifact": "12715209462" } ], "_bioccheck": { "error": 0, "warning": 1, "note": 11 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/40419232220", "_commit": { "id": "d6e2b5888120a43e4e159866ba81c77b2b5e3267", "author": "Al-Murphy ", "committer": "Al-Murphy ", "message": "Fix pkgdown GitHub Action running out of disk, bump version 1.21.2\n\nInstalling every Suggests, including both dbSNP155 SNPlocs packages\n(~6 GB each, held three times while pak downloads, builds and installs),\nfilled the runner disk. 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