{ "_id": "6a1ac3281d7bb097a09da1b8", "Package": "MultiRNAflow", "Title": "An R package for integrated analysis of temporal RNA-seq data\nwith multiple biological conditions", "Version": "1.11.0", "Authors@R": "c(\nperson(\"Rodolphe\", \"Loubaton\", , \"loubaton.rodolphe@gmail.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-1442-7270\")),\nperson(\"Nicolas\", \"Champagnat\", , \"nicolas.champagnat@inria.fr\", role = c(\"aut\", \"ths\"),\ncomment = c(ORCID = \"0000-0002-5128-2357\")),\nperson(\"Laurent\", \"Vallat\", , \"vallat@unistra.fr\", role = c(\"aut\", \"ths\"),\ncomment = c(ORCID = \"0000-0002-5226-7706\")),\nperson(\"Pierre\", \"Vallois\", , \"pierre.vallois@univ-lorraine.fr\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-2123-0142\")),\nperson(\"Région Grand Est\", role = \"fnd\"),\nperson(\"Cancéropôle Est\", role = \"fnd\")\n)", "Description": "Our R package MultiRNAflow provides an easy to use unified\nframework allowing to automatically make both unsupervised and\nsupervised (DE) analysis for datasets with an arbitrary number\nof biological conditions and time points. In particular, our\ncode makes a deep downstream analysis of DE information, e.g.\nidentifying temporal patterns across biological conditions and\nDE genes which are specific to a biological condition for each\ntime.", "License": "GPL-3 | file LICENSE", "URL": "https://github.com/loubator/MultiRNAflow", "BugReports": "https://github.com/loubator/MultiRNAflow/issues", "VignetteBuilder": "knitr", "biocViews": "Sequencing, RNASeq, GeneExpression, Transcription,\nTimeCourse, Preprocessing, Visualization, Normalization,\nPrincipalComponent, Clustering, DifferentialExpression,\nGeneSetEnrichment, Pathways", "Config/testthat/edition": "3", "Encoding": "UTF-8", "LazyData": "false", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "Config/pak/sysreqs": "cmake libfreetype6-dev libglu1-mesa-dev make\ntexlive libicu-dev libpng-dev libuv1-dev libgl1-mesa-dev\nlibssl-dev perl zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 13:01:24 UTC", 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