{
  "_id": "6a1ac3a81d7bb097a09dabbe",
  "Package": "MantelCorr",
  "Title": "Compute Mantel Cluster Correlations",
  "Version": "1.83.0",
  "Date": "2005-17-10",
  "Author": "Brian Steinmeyer and William Shannon",
  "Description": "Computes Mantel cluster correlations from a (p x n)\nnumeric data matrix (e.g. microarray gene-expression data).",
  "Maintainer": "Brian Steinmeyer <steinmeb@ilya.wustl.edu>",
  "License": "GPL (>= 2)",
  "biocViews": "Clustering",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:31:28 UTC",
  "RemoteUrl": "https://github.com/bioc/MantelCorr",
  "RemoteRef": "HEAD",
  "RemoteSha": "3b313abc382188e393e186a9724082427273fb21",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-30 07:43:31 UTC",
    "User": "root"
  },
  "MD5sum": "e8736d998c01d976edc5bc8d43614880",
  "_user": "bioc",
  "_type": "src",
  "_file": "MantelCorr_1.83.0.tar.gz",
  "_fileid": "ce4b4c0497b691f0765ea072b54163be5c2020425ba59057322e76ce354a02dd",
  "_filesize": 886145,
  "_sha256": "ce4b4c0497b691f0765ea072b54163be5c2020425ba59057322e76ce354a02dd",
  "_created": "2026-05-30T07:43:31.000Z",
  "_published": "2026-05-30T11:02:00.122Z",
  "_jobs": [
    {
      "job": 78634323904,
      "time": 131,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7306578866"
    },
    {
      "job": 78634323906,
      "time": 162,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7306581739"
    },
    {
      "job": 78634323911,
      "time": 162,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306581782"
    },
    {
      "job": 78634323918,
      "time": 74,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7307697426"
    },
    {
      "job": 78634323912,
      "time": 104,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7307700018"
    },
    {
      "job": 78634199067,
      "time": 151,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306565435"
    },
    {
      "job": 78634323903,
      "time": 78,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306573735"
    },
    {
      "job": 78634323910,
      "time": 78,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7306573659"
    },
    {
      "job": 78634323936,
      "time": 75,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7306573326"
    },
    {
      "job": 78634323923,
      "time": 61,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306572109"
    }
  ],
  "_bioccheck": {
    "error": 1,
    "warning": 2,
    "note": 10
  },
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/bioc/MantelCorr",
  "_commit": {
    "id": "3b313abc382188e393e186a9724082427273fb21",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379488
  },
  "_maintainer": {
    "name": "Brian Steinmeyer",
    "email": "steinmeb@ilya.wustl.edu"
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.83.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.82.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "clustering"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 358,
    "source": "https://www.bioconductor.org/packages/stats/bioc/MantelCorr"
  },
  "_searchresults": 7,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/MantelCorr.html",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "ClusterGeneList",
    "ClusterList",
    "DistMatrices",
    "GetClusters",
    "MantelCorrs",
    "PermutationTest"
  ],
  "_datasets": [
    {
      "name": "GolubTrain",
      "title": "Golub Training Set",
      "object": "GolubTrain",
      "file": "GolubTrain.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "X1",
        "X2",
        "X3",
        "X4",
        "X5",
        "X6",
        "X7",
        "X8",
        "X9",
        "X10",
        "X11",
        "X12",
        "X13",
        "X14",
        "X15",
        "X16",
        "X17",
        "X18",
        "X19",
        "X20",
        "X21",
        "X22",
        "X23",
        "X24",
        "X25",
        "X26",
        "X27",
        "X28",
        "X29",
        "X30",
        "X31",
        "X32",
        "X33",
        "X34",
        "X35",
        "X36",
        "X37",
        "X38"
      ],
      "rows": 7129,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "ClusterGeneList",
      "title": "Generate Genes from a Cluster List",
      "topics": [
        "ClusterGeneList"
      ]
    },
    {
      "page": "ClusterList",
      "title": "Generate a Cluster List",
      "topics": [
        "ClusterList"
      ]
    },
    {
      "page": "DistMatrices",
      "title": "Compute Dissimilarity Matrices",
      "topics": [
        "DistMatrices"
      ]
    },
    {
      "page": "GetClusters",
      "title": "Over-Partition a (p x n) Data Matrix using 'kmeans'",
      "topics": [
        "GetClusters"
      ]
    },
    {
      "page": "GolubTrain",
      "title": "Golub Training Set",
      "topics": [
        "GolubTrain"
      ]
    },
    {
      "page": "MantelCorrs",
      "title": "Compute Mantel Correlation(s)",
      "topics": [
        "MantelCorrs"
      ]
    },
    {
      "page": "PermutationTest",
      "title": "Permutation Test for Dissimilarity Matrices",
      "topics": [
        "PermutationTest"
      ]
    }
  ],
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "MantelCorrVignette.Rnw",
      "filename": "MantelCorrVignette.pdf",
      "title": "MantelCorrVignette",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-11-01 19:55:25",
      "modified": "2013-11-01 19:55:25",
      "commits": 1
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "mantelcorr",
  "_universes": [
    "bioc"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.83.0",
      "date": "2026-05-30T07:46:17.000Z",
      "distro": "noble",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "692ba631c596d7a35737a73159d63def8493e52380a08ac58fc10973735c48b9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.83.0",
      "date": "2026-05-30T07:46:17.000Z",
      "distro": "noble",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "87a6fb25853a6569cfc116ca8b81fabb2a1f82d40eddc7bcc3be6afd267759d3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.83.0",
      "date": "2026-05-30T11:00:26.000Z",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "c2eab42d44d0fcca9cbe8023bd46084db8428d8e32b86fb2f6d9004cce67d070",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.83.0",
      "date": "2026-05-30T11:00:43.000Z",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "b79f1cee18e9cf2f1d54a4c21978f179e7ff911f605136798a5935dc96db29e3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.83.0",
      "date": "2026-05-30T07:45:07.000Z",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "1e79985bd638f7e14c58f304e85e88ca7514ee35f71ebae3a7de3239676a41ac",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.83.0",
      "date": "2026-05-30T07:44:51.000Z",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "d4cd1f928af46208a54fbf7dea8f8623d5979d652b4812d103f601a71315764e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.83.0",
      "date": "2026-05-30T07:44:48.000Z",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "c33ad4b064fdaa51d6af032add59e6319102dc739b17818c8905e3ae596c5b58",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.83.0",
      "date": "2026-05-30T07:44:34.000Z",
      "commit": "3b313abc382188e393e186a9724082427273fb21",
      "fileid": "712ea7bc29d717de3672553d35030b61ac0a2b6d0281f60ebacfb4bf4393f7a3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678323416"
    }
  ]
}