{ "_id": "6ae5d7f38d250e7ad09f3e0a", "Package": "MantelCorr", "Title": "Compute Mantel Cluster Correlations", "Version": "1.83.0", "Date": "2005-17-10", "Author": "Brian Steinmeyer and William Shannon", "Description": "Computes Mantel cluster correlations from a (p x n)\nnumeric data matrix (e.g. microarray gene-expression data).", "Maintainer": "Brian Steinmeyer ", "License": "GPL (>= 2)", "biocViews": "Clustering", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:31:28 UTC", "RemoteUrl": "https://github.com/bioc/MantelCorr", "RemoteRef": "HEAD", "RemoteSha": "3b313abc382188e393e186a9724082427273fb21", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-31 10:43:24 UTC", "User": "root" }, "_user": "bioc", "_type": "src", "_file": "MantelCorr_1.83.0.tar.gz", "_fileid": "https://r2.ropensci.org/ac0d3dc8716ef093dece9aa70599b2f95292f5ce7de33c9c9cad068614faaa1e", "_filesize": 887786, "_sha256": "ac0d3dc8716ef093dece9aa70599b2f95292f5ce7de33c9c9cad068614faaa1e", "_expires": "2027-02-08T11:58:41.000Z", "_created": "2026-10-31T10:43:24.000Z", "_published": "2026-10-31T11:58:43.698Z", "_upstream": "https://github.com/bioc/MantelCorr", "_status": "success", "_maintainer": { "name": "Brian Steinmeyer", "email": "steinmeb@ilya.wustl.edu" }, "_jobs": [ { "job": 124516157865, "time": 119, "config": "bioc-checks", "r": "4.6.1", "check": "ERROR", "artifact": "13039069151" }, { "job": 124516157855, "time": 158, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "13039403442" }, { "job": 124516157899, "time": 185, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "13039828791" }, { "job": 124516157909, "time": 75, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "13041802238" }, { "job": 124516157910, "time": 79, "config": "macos-release-arm64", "r": "4.6.2", "check": "OK", "artifact": "13041752471" }, { "job": 124515642429, "time": 156, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "13039913173" }, { "job": 124516157981, "time": 72, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "13039738706" }, { "job": 124516157937, "time": 54, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "13039788531" }, { "job": 124516157926, "time": 57, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "13039958212" }, { "job": 124516157891, "time": 52, "config": "windows-release-x86_64", "r": "4.6.2", "check": "OK", "artifact": "13039668955" } ], "_bioccheck": { "error": 1, "warning": 3, "note": 9 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530", "_commit": { "id": "3b313abc382188e393e186a9724082427273fb21", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777379488 }, "_distro": "resolute", "_host": "GitHub-Actions", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "stats", "role": "Imports" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.83.0", "bioc": "3.24", "repository": "bioc" }, { "branch": "release", "version": "1.82.0", "bioc": "3.23", "repository": "bioc" } ], "_topics": [ "clustering" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 480, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 578, "source": "https://www.bioconductor.org/packages/stats/bioc/MantelCorr" }, "_searchresults": 5, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/MantelCorr.html", "extra/manual.pdf" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "ClusterGeneList", "ClusterList", "DistMatrices", "GetClusters", "MantelCorrs", "PermutationTest" ], "_datasets": [ { "name": "GolubTrain", "title": "Golub Training Set", "object": "GolubTrain", "file": "GolubTrain.rda", "class": [ "data.frame" ], "fields": [ "X1", "X2", "X3", "X4", "X5", "X6", "X7", "X8", "X9", "X10", "X11", "X12", "X13", "X14", "X15", "X16", "X17", "X18", "X19", "X20", "X21", "X22", "X23", "X24", "X25", "X26", "X27", "X28", "X29", "X30", "X31", "X32", "X33", "X34", "X35", "X36", "X37", "X38" ], "rows": 7129, "table": true, "tojson": true } ], "_help": [ { "page": "ClusterGeneList", "title": "Generate Genes from a Cluster List", "topics": [ "ClusterGeneList" ] }, { "page": "ClusterList", "title": "Generate a Cluster List", "topics": [ "ClusterList" ] }, { "page": "DistMatrices", "title": "Compute Dissimilarity Matrices", "topics": [ "DistMatrices" ] }, { "page": "GetClusters", "title": "Over-Partition a (p x n) Data Matrix using 'kmeans'", "topics": [ "GetClusters" ] }, { "page": "GolubTrain", "title": "Golub Training Set", "topics": [ "GolubTrain" ] }, { "page": "MantelCorrs", "title": "Compute Mantel Correlation(s)", "topics": [ "MantelCorrs" ] }, { "page": "PermutationTest", "title": "Permutation Test for Dissimilarity Matrices", "topics": [ "PermutationTest" ] } ], "_rundeps": [], "_vignettes": [ { "source": "MantelCorrVignette.Rnw", "filename": "MantelCorrVignette.pdf", "title": "MantelCorrVignette", "engine": "utils::Sweave", "headings": [], "created": "2013-11-01 19:55:25", "modified": "2013-11-01 19:55:25", "commits": 1 } ], "_score": 3.3010299956639813, "_indexed": true, "_nocasepkg": "mantelcorr", "_universes": [ "bioc" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.83.0", "date": "2026-10-31T10:46:11.000Z", "distro": "resolute", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/abb328258bda8041acdf495bee15c213c095e1f88c102f9d729c3407476df13c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" }, { "r": "4.6.1", "os": "linux", "version": "1.83.0", "date": "2026-10-31T10:46:40.000Z", "distro": "resolute", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/a5c87a9c36db5461c59d6ab23e3c429627cb6ff6873a3500a52747159e0ca871", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" }, { "r": "4.5.3", "os": "mac", "version": "1.83.0", "date": "2026-10-31T11:58:03.000Z", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/b870f268408bd78fa429aa9c1e5d2f70b5b758b25a0bade200aa292daac0ba7a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" }, { "r": "4.6.2", "os": "mac", "version": "1.83.0", "date": "2026-10-31T11:58:07.000Z", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/f22d9927b9657b52c3b7ab1f3851d9a22d2dcdea436a2ee6deb3675203e75c68", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" }, { "r": "4.6.0", "os": "wasm", "version": "1.83.0", "date": "2026-10-31T10:44:56.000Z", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/74d021552f8cf9573b9de1e52fc921cbcc6c18c76e7f679d51ac02f170e0aa5e", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" }, { "r": "4.7.0", "os": "win", "version": "1.83.0", "date": "2026-10-31T10:44:21.000Z", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/5d7f1792b066c180a602e7799be0ee269c2d2b9d1e75e1d31d5d657aad22d674", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" }, { "r": "4.5.3", "os": "win", "version": "1.83.0", "date": "2026-10-31T10:44:27.000Z", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/36bd01d3e66c39b965aee6904e64c353dc6ffbb6e3c7f2e4ca65fa92062ea90c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" }, { "r": "4.6.2", "os": "win", "version": "1.83.0", "date": "2026-10-31T10:44:23.000Z", "commit": "3b313abc382188e393e186a9724082427273fb21", "fileid": "https://r2.ropensci.org/ae04d1290116189c48b42e5a2a86ce186d8274781fd7b71acdca831fa36f3e83", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41193728530" } ] }