{ "_id": "6a1ae8f01d7bb097a09f250a", "Package": "M3Drop", "Version": "1.39.0", "Date": "2024-03-25", "Title": "Michaelis-Menten Modelling of Dropouts in single-cell RNASeq", "Author": "Tallulah Andrews ", "Maintainer": "Tallulah Andrews ", "VignetteBuilder": "knitr", "biocViews": "RNASeq, Sequencing, Transcriptomics, GeneExpression,\nSoftware, DifferentialExpression, DimensionReduction,\nFeatureExtraction", "Collate": "basics.R Plotting_fxns.R Curve_fitting.R Extremes.R\nNormalization.R Brennecke_implementation.R\nThreeway_ProportionalArea_VennDiagrams.R\nSimulations_Functions.R Traditional_DE.R NB_UMI.R\nM3D_Imputation.R Other_FS_functions.R DANB_HVG.R\nDANB_Coexpression.R", "Description": "This package fits a model to the pattern of dropouts in\nsingle-cell RNASeq data. This model is used as a null to\nidentify significantly variable (i.e. differentially expressed)\ngenes for use in downstream analysis, such as clustering cells.\nAlso includes an method for calculating exact Pearson residuals\nin UMI-tagged data using a library-size aware negative binomial\nmodel.", "URL": "https://github.com/tallulandrews/M3Drop", "BugReports": "https://github.com/tallulandrews/M3Drop/issues", "License": "GPL (>=2)", "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libfribidi-dev make libharfbuzz-dev libicu-dev\nlibjpeg-dev libpng-dev libtiff-dev libuv1-dev libwebp-dev\nzlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:44:35 UTC", "RemoteUrl": "https://github.com/bioc/M3Drop", "RemoteRef": "HEAD", "RemoteSha": "987a662dbbe2c91ea3e79db1ca43457b46c15de6", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 09:37:51 UTC", "User": "root" }, "MD5sum": "15729b3405bba00d1bf7849689453826", 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