{ "_id": "6ae767bd9ceaa78f2009a050", "Package": "LRBaseDbi", "Title": "DBI to construct LRBase-related package", "Description": "Interface to construct LRBase package (LRBase.XXX.eg.db).", "Version": "2.23.0", "Author": "Koki Tsuyuzaki", "Maintainer": "Koki Tsuyuzaki ", "VignetteBuilder": "utils", "biocViews": "Infrastructure", "License": "Artistic-2.0", "Config/pak/sysreqs": "libpng-dev libssl-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:48:22 UTC", "RemoteUrl": "https://github.com/bioc/LRBaseDbi", "RemoteRef": "HEAD", "RemoteSha": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "NeedsCompilation": "no", "Packaged": { "Date": "2026-11-01 13:54:12 UTC", "User": "root" }, "_user": "bioc", "_type": "src", "_file": "LRBaseDbi_2.23.0.tar.gz", "_fileid": "https://r2.ropensci.org/2855cccd84eb8746e162e777e10a55aede4adeb621ba4aba726324828e7e4b61", "_filesize": 87522, "_sha256": "2855cccd84eb8746e162e777e10a55aede4adeb621ba4aba726324828e7e4b61", "_expires": "2027-02-09T16:24:27.000Z", "_created": "2026-11-01T13:54:12.000Z", "_published": "2026-11-01T16:24:29.195Z", "_upstream": "https://github.com/bioc/LRBaseDbi", "_status": "failure", "_maintainer": { "name": "Koki Tsuyuzaki", "email": "k.t.the-answer@hotmail.co.jp", "login": "kokitsuyuzaki", "description": "", "uuid": 2173745 }, "_jobs": [ { "job": 124868696576, "time": 140, "config": "bioc-checks", "r": "4.6.2", "check": "ERROR", "artifact": "13087680745" }, { "job": 124868696664, "time": 257, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "13086888112" }, { "job": 124868696536, "time": 243, "config": "linux-release-x86_64", "r": "4.6.2", "check": "WARNING", "artifact": "13087441698" }, { "job": 124868696591, "time": 165, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "13091326900" }, { "job": 124868696613, "time": 142, "config": "macos-release-arm64", "r": "4.6.2", "check": "WARNING", "artifact": "13091556005" }, { "job": 124861053073, "time": 207, "config": "source", "r": "4.6.2", "check": "ERROR", "artifact": "13086072463" }, { "job": 124868696571, "time": 111, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "13086977405" }, { "job": 124868696566, "time": 177, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "13085863063" }, { "job": 124868696616, "time": 140, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "WARNING", "artifact": "13086014344" }, { "job": 124868696629, "time": 149, "config": "windows-release-x86_64", "r": "4.6.2", "check": "WARNING", "artifact": "13086690476" } ], "_bioccheck": { "error": 3, "warning": 3, "note": 5 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243", "_commit": { "id": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777380502 }, "_distro": "resolute", "_host": "GitHub-Actions", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "methods", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "AnnotationDbi", "role": "Imports" }, { "package": "RSQLite", "role": "Imports" }, { "package": "DBI", "role": "Imports" }, { "package": "Biobase", "role": "Imports" }, { "package": "testthat", "role": "Suggests" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "AnnotationHub", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "2.23.0", "bioc": "3.24", "repository": "bioc" }, { "branch": "release", "version": "2.22.0", "bioc": "3.23", "repository": "bioc" } ], "_topics": [ "infrastructure" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 482, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 496, "source": "https://www.bioconductor.org/packages/stats/bioc/LRBaseDbi" }, "_searchresults": 11, "_abi": { "exports": [ { "key": "LRBaseDbi::LRBaseDb", "hash": "2e39d2acfc534e21" }, { "key": "LRBaseDbi::generic:lrListDatabases", "hash": "8341d63d7550b7bc" }, { "key": "LRBaseDbi::generic:lrNomenclature", "hash": "bdb22b769759d34d" }, { "key": "LRBaseDbi::generic:lrVersion", "hash": "9340dcff6afae374" } ], "imports": [ { "key": "AnnotationDbi::AnnotationDb", "hash": "a4bdd04b3ae79fb2" }, { "key": "AnnotationDbi::generic:columns", "hash": "05e2c7067b5e829f" }, { "key": "AnnotationDbi::generic:dbInfo", "hash": "f14f50605adc0191" }, { "key": "AnnotationDbi::generic:dbschema", "hash": "03210cc99cc0e176" }, { "key": "AnnotationDbi::generic:keys", "hash": "931ea12e0913cf48" }, { "key": "AnnotationDbi::generic:keytypes", "hash": "1861f8e46f59b1c3" }, { "key": "AnnotationDbi::generic:select", "hash": "ba90536ae2ef92ed" }, { "key": "BiocGenerics::generic:dbconn", "hash": "d11436b189efe324" }, { "key": "BiocGenerics::generic:dbfile", "hash": "f7b4a360a0b0b471" }, { "key": "BiocGenerics::generic:species", "hash": "7afffb7b1c31832e" } ] }, "_rbuild": "4.6.2", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/LRBaseDbi.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "columns", "dbconn", "dbfile", "dbInfo", "dbschema", "keys", "keytypes", "LRBaseDb", "lrListDatabases", "lrNomenclature", "lrVersion", "select", "species" ], "_help": [ { "page": "LRBaseDb", "title": "LRBaseDb objects", "topics": [ "class:LRBaseDb", "columns", "columns,LRBaseDb-method", "dbconn", "dbconn,LRBaseDb-method", "dbfile", "dbfile,LRBaseDb-method", "dbInfo", "dbInfo,LRBaseDb-method", "dbschema", "dbschema,LRBaseDb-method", "keys", "keys,LRBaseDb-method", "keytypes", "keytypes,LRBaseDb-method", "LRBaseDb", "LRBaseDb-class", "lrListDatabases", "lrListDatabases,LRBaseDb-method", "lrNomenclature", "lrNomenclature,LRBaseDb-method", "lrVersion", "lrVersion,LRBaseDb-method", "select", "select,LRBaseDb-method", "species", "species,LRBaseDb-method" ] } ], "_rundeps": [ "AnnotationDbi", "askpass", "Biobase", "BiocBaseUtils", "BiocGenerics", "Biostrings", "bit", "bit64", "blob", "cachem", "cli", "cpp11", "crayon", "curl", "DBI", "fastmap", "generics", "glue", "httr", "IRanges", "jsonlite", "KEGGREST", "lifecycle", "memoise", "mime", "openssl", "pkgconfig", "png", "R6", "rlang", "RSQLite", "S4Vectors", "Seqinfo", "sys", "vctrs", "XVector" ], "_score": 2.3424226808222066, "_indexed": true, "_nocasepkg": "lrbasedbi", "_universes": [ "bioc", "kokitsuyuzaki" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2.23.0", "date": "2026-11-01T14:20:42.000Z", "distro": "resolute", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/7c79cc7278a7e3cf7b7275f54bb418fa6c8f8a36c403856bfaca8b9f0a7e8c2c", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" }, { "r": "4.6.2", "os": "linux", "version": "2.23.0", "date": "2026-11-01T14:20:01.000Z", "distro": "resolute", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/276b507c52d8e0f2fc90cbcd31cb1def1414b33b381155aab796aa60a7e4542a", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" }, { "r": "4.5.3", "os": "mac", "version": "2.23.0", "date": "2026-11-01T16:22:51.000Z", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/6f546b11913199e1e35e462ac1c6477df244f8d549d03d33984a289104a48154", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" }, { "r": "4.6.2", "os": "mac", "version": "2.23.0", "date": "2026-11-01T16:22:25.000Z", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/6788b54e0cca7d2a9a17ea317ae176dd0169be6091b07b8c3e5f123ac9b0727b", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" }, { "r": "4.6.0", "os": "wasm", "version": "2.23.0", "date": "2026-11-01T14:19:07.000Z", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/040ba83143fa67f8cfd8886ab742b0c73798e10a10d897eadb3e43de6a58b397", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" }, { "r": "4.7.0", "os": "win", "version": "2.23.0", "date": "2026-11-01T13:55:54.000Z", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/02acd72978360de1f914463477a1268a69d6194bcf4895b9516543b3d1708aef", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" }, { "r": "4.5.3", "os": "win", "version": "2.23.0", "date": "2026-11-01T13:55:55.000Z", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/3ad36bb36342e8a76ef4e7c64d3f27a04ab5d533ac824905d958788e8d08f15a", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" }, { "r": "4.6.2", "os": "win", "version": "2.23.0", "date": "2026-11-01T13:55:56.000Z", "commit": "14a9f3b3f07b5528fb43fe341d4b83a1237df397", "fileid": "https://r2.ropensci.org/f1e0909f5e2788563e6cf75e21e18e696dc4745b3728887e86b1a531b114ae32", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/41310110243" } ] }