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"topics": [ "expandKEGGNode" ] }, { "page": "expandKEGGPathway", "title": "Expand KEGG Pathway", "topics": [ "expandKEGGPathway" ] }, { "page": "getDisplayName-methods", "title": "Get a character string as label for display", "topics": [ "getDisplayName", "getDisplayName,graph-method", "getDisplayName,KEGGNode-method", "getDisplayName-methods" ] }, { "page": "getEntryID-methods", "title": "Get entry ID for single or list of KEGGNode or KEGGedge object(s)", "topics": [ "getEntryID", "getEntryID,KEGGEdge-method", "getEntryID,KEGGNode-method", "getEntryID,list-method", "getEntryID-methods" ] }, { "page": "getKEGGgeneLink-methods", "title": "Get KEGG gene link", "topics": [ "getKEGGgeneLink", "getKEGGgeneLink,character-method", "getKEGGgeneLink-methods" ] }, { "page": "getKEGGID-methods", "title": "Get KEGG ID", "topics": [ "getKEGGID", "getKEGGID,KEGGNode-method", "getKEGGID-methods" ] }, { "page": "getKEGGnodeData", "title": "Get or set list of KEGG node or edge data", "topics": [ 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}, { "page": "parseKGML2DataFrame", "title": "Parse KGML file into a data frame", "topics": [ "parseKGML2DataFrame" ] }, { "page": "parseKGML2Graph", "title": "Parse KGML files into KEGG graph", "topics": [ "parseKGML2Graph" ] }, { "page": "parseKGMLexpandMaps", "title": "A convenient function to parse KGML and expand its containing maps into one graph object", "topics": [ "parseKGMLexpandMaps" ] }, { "page": "parsePathwayInfo", "title": "Parse information of the pathway from KGML files", "topics": [ "parsePathwayInfo" ] }, { "page": "parseReaction", "title": "Parse reaction from KGML files", "topics": [ "parseReaction" ] }, { "page": "parseRelation", "title": "Parse RELATION elements from KGML files", "topics": [ "parseRelation" ] }, { "page": "parseSubType", "title": "Parse KGML relation subtype", "topics": [ "parseSubType" ] }, { "page": "plotKEGGgraph", "title": "Plot KEGG graph with Rgraphviz", "topics": [ "KEGGgraphLegend", "plotKEGGgraph" ] }, { "page": "pvalue2asterisk", 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