{
"_id": "6ab0da083d719c1f84083b95",
"Package": "KEGGREST",
"Version": "1.53.6",
"Title": "Client-side REST access to the Kyoto Encyclopedia of Genes and\nGenomes (KEGG)",
"Authors@R": "c(\nperson(\"Dan\", \"Tenenbaum\", role = \"aut\"),\nperson(\"Bioconductor Package\", \"Maintainer\", role = c(\"aut\", \"cre\"),\nemail = \"maintainer@bioconductor.org\"),\nperson(\"Martin\", \"Morgan\", role = \"ctb\"),\nperson(\"Kozo\", \"Nishida\", role = \"ctb\"),\nperson(\"Marcel\", \"Ramos\", role = \"ctb\"),\nperson(\"Kristina\", \"Riemer\", role = \"ctb\"),\nperson(\"Lori\", \"Shepherd\", role = \"ctb\"),\nperson(\"Jeremy\", \"Volkening\", role = \"ctb\")\n)",
"Description": "A package that provides a client interface to the Kyoto\nEncyclopedia of Genes and Genomes (KEGG) REST API. Only for\nacademic use by academic users belonging to academic\ninstitutions (see ). Note that\nKEGGREST is based on KEGGSOAP by J. Zhang, R. Gentleman, and\nMarc Carlson, and KEGG (python package) by Aurelien Mazurie.",
"URL": "https://bioconductor.org/packages/KEGGREST",
"BugReports": "https://github.com/Bioconductor/KEGGREST/issues",
"License": "Artistic-2.0",
"VignetteBuilder": "knitr",
"biocViews": "Annotation, Pathways, ThirdPartyClient, KEGG",
"RoxygenNote": "7.1.1",
"Date": "2026-07-22",
"Config/pak/sysreqs": "libpng-dev libssl-dev zlib1g-dev",
"Repository": "https://bioc.r-universe.dev",
"Date/Publication": "2026-07-22 20:09:17 UTC",
"RemoteUrl": "https://github.com/bioc/KEGGREST",
"RemoteRef": "HEAD",
"RemoteSha": "0fbb64c9423f09109e684fb648dac95ae943199d",
"NeedsCompilation": "no",
"Packaged": {
"Date": "2026-09-21 07:11:46 UTC",
"User": "root"
},
"Author": "Dan Tenenbaum [aut],\nBioconductor Package Maintainer [aut, cre],\nMartin Morgan [ctb],\nKozo Nishida [ctb],\nMarcel Ramos [ctb],\nKristina Riemer [ctb],\nLori Shepherd [ctb],\nJeremy Volkening [ctb]",
"Maintainer": "Bioconductor Package Maintainer ",
"_user": "bioc",
"_type": "src",
"_file": "KEGGREST_1.53.6.tar.gz",
"_fileid": "https://r2.ropensci.org/847d3f493270aea09a25ed2e5876f02583e90116c5166f1bae4e530ad0414804",
"_filesize": 144974,
"_sha256": "847d3f493270aea09a25ed2e5876f02583e90116c5166f1bae4e530ad0414804",
"_expires": "2026-12-30T07:17:24.000Z",
"_created": "2026-09-21T07:11:46.000Z",
"_published": "2026-09-21T07:17:26.454Z",
"_bioccheck": {
"error": 0,
"warning": 0,
"note": 10
},
"_host": "GitHub-Actions",
"_buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442",
"_status": "success",
"_upstream": "https://github.com/bioc/KEGGREST",
"_commit": {
"id": "0fbb64c9423f09109e684fb648dac95ae943199d",
"author": "LiNk-NY ",
"committer": "LiNk-NY ",
"message": "version bump 1.53.6\n",
"time": 1784750957
},
"_maintainer": {
"name": "Bioconductor Package Maintainer",
"email": "maintainer@bioconductor.org",
"login": "bioconductor-bot",
"description": "",
"uuid": 11681645
},
"_distro": "resolute",
"_jobs": [
{
"job": 106244891183,
"time": 159,
"config": "bioc-checks",
"r": "4.6.1",
"check": "NOTE",
"artifact": "10626153564"
},
{
"job": 106244891157,
"time": 285,
"config": "linux-devel-x86_64",
"r": "4.7.0",
"check": "OK",
"artifact": "10626640987"
},
{
"job": 106244891166,
"time": 303,
"config": "linux-release-x86_64",
"r": "4.6.1",
"check": "OK",
"artifact": "10625969062"
},
{
"job": 106244891151,
"time": 198,
"config": "macos-oldrel-arm64",
"r": "4.5.3",
"check": "OK",
"artifact": "10626067464"
},
{
"job": 106244891277,
"time": 188,
"config": "macos-release-arm64",
"r": "4.6.1",
"check": "OK",
"artifact": "10626362799"
},
{
"job": 106244020553,
"time": 212,
"config": "source",
"r": "4.6.1",
"check": "OK",
"artifact": "10626028494"
},
{
"job": 106244891188,
"time": 132,
"config": "wasm-release",
"r": "4.6.0",
"check": "OK",
"artifact": "10626795299"
},
{
"job": 106244891224,
"time": 197,
"config": "windows-devel-x86_64",
"r": "4.7.0",
"check": "OK",
"artifact": "10626003878"
},
{
"job": 106244891312,
"time": 199,
"config": "windows-oldrel-x86_64",
"r": "4.5.3",
"check": "OK",
"artifact": "10626128859"
},
{
"job": 106244891257,
"time": 192,
"config": "windows-release-x86_64",
"r": "4.6.1",
"check": "OK",
"artifact": "10625839285"
}
],
"_registered": true,
"_dependencies": [
{
"package": "R",
"version": ">= 3.5.0",
"role": "Depends"
},
{
"package": "methods",
"role": "Imports"
},
{
"package": "httr",
"role": "Imports"
},
{
"package": "png",
"role": "Imports"
},
{
"package": "Biostrings",
"role": "Imports"
},
{
"package": "RUnit",
"role": "Suggests"
},
{
"package": "BiocGenerics",
"role": "Suggests"
},
{
"package": "BiocStyle",
"role": "Suggests"
},
{
"package": "knitr",
"role": "Suggests"
},
{
"package": "markdown",
"role": "Suggests"
}
],
"_owner": "bioc",
"_selfowned": true,
"_usedby": 817,
"_updates": [
{
"week": "2025-41",
"n": 2
},
{
"week": "2025-44",
"n": 2
},
{
"week": "2025-47",
"n": 4
},
{
"week": "2026-18",
"n": 2
},
{
"week": "2026-25",
"n": 9
},
{
"week": "2026-28",
"n": 2
},
{
"week": "2026-30",
"n": 4
}
],
"_tags": [],
"_bioc": [
{
"branch": "devel",
"version": "1.53.6",
"bioc": "3.24"
},
{
"branch": "release",
"version": "1.52.2",
"bioc": "3.23"
}
],
"_topics": [
"annotation",
"pathways",
"thirdpartyclient",
"kegg",
"bioconductor-package",
"core-package"
],
"_stars": 15,
"_contributors": [
{
"user": "dtenenba",
"count": 68,
"uuid": 2286826
},
{
"user": "link-ny",
"count": 27,
"uuid": 4392950
},
{
"user": "jwokaty",
"count": 16,
"uuid": 1744257
},
{
"user": "nturaga",
"count": 14,
"uuid": 2746443
},
{
"user": "mtmorgan",
"count": 10,
"uuid": 118552
},
{
"user": "lshep",
"count": 8,
"uuid": 18724380
},
{
"user": "kristinariemer",
"count": 4,
"uuid": 6686508
},
{
"user": "hpages",
"count": 3,
"uuid": 8810451
},
{
"user": "dvantwisk",
"count": 2,
"uuid": 10927671
},
{
"user": "sonali-bioc",
"count": 2,
"uuid": 6373953
},
{
"user": "vobencha",
"count": 2,
"uuid": 2466173
},
{
"user": "alisajid",
"count": 1,
"uuid": 395482
},
{
"user": "kozo2",
"count": 1,
"uuid": 12192
},
{
"user": "jvolkening",
"count": 1,
"uuid": 11667655
},
{
"user": "vjcitn",
"count": 1,
"uuid": 4624066
},
{
"user": "zielinskipp",
"count": 1,
"uuid": 7211781
}
],
"_userbio": {
"uuid": 2286807,
"type": "organization",
"name": "Bioconductor",
"followers": 468,
"description": "Software for the analysis and comprehension of high-throughput genomic data"
},
"_downloads": {
"count": 87394,
"source": "https://www.bioconductor.org/packages/stats/bioc/KEGGREST"
},
"_mentions": 75,
"_devurl": "https://github.com/bioconductor/keggrest",
"_searchresults": 1664,
"_rbuild": "4.6.1",
"_assets": [
"extra/citation.cff",
"extra/citation.html",
"extra/citation.json",
"extra/citation.txt",
"extra/contents.json",
"extra/KEGGREST.html",
"extra/manual.pdf",
"extra/NEWS.html",
"extra/NEWS.txt",
"extra/readme.html",
"extra/readme.md"
],
"_homeurl": "https://github.com/bioconductor/keggrest",
"_realowner": "bioc",
"_cranurl": false,
"_exports": [
"color.pathway.by.objects",
"keggCompounds",
"keggConv",
"keggFind",
"keggGet",
"keggInfo",
"keggLink",
"keggList",
"listDatabases"
],
"_help": [
{
"page": "mark.pathway.by.objects",
"title": "Client-side interface to obtain an url for a KEGG pathway diagram with a given set of genes marked",
"topics": [
"color.pathway.by.objects"
]
},
{
"page": "keggCompounds",
"title": "Get list of compounds IDs for pathway",
"topics": [
"keggCompounds"
]
},
{
"page": "keggConv",
"title": "Convert KEGG identifiers to/from outside identifiers",
"topics": [
"bconv",
"conv",
"keggConv"
]
},
{
"page": "keggFind",
"title": "Finds entries with matching query keywords or other query data in a given database",
"topics": [
"keggFind"
]
},
{
"page": "keggGet",
"title": "Retrieves given database entries",
"topics": [
"keggGet"
]
},
{
"page": "keggInfo",
"title": "Displays the current statistics of a given database",
"topics": [
"info",
"keggInfo"
]
},
{
"page": "keggLink",
"title": "Find related entries by using database cross-references.",
"topics": [
"keggLink",
"link"
]
},
{
"page": "keggList",
"title": "Returns a list of entry identifiers and associated definition for a given database or a given set of database entries.",
"topics": [
"keggList"
]
},
{
"page": "listDatabases",
"title": "Lists the KEGG databases which may be searched.",
"topics": [
"listDatabases"
]
}
],
"_readme": "https://github.com/bioc/KEGGREST/raw/HEAD/README.md",
"_rundeps": [
"askpass",
"BiocGenerics",
"Biostrings",
"crayon",
"curl",
"generics",
"httr",
"IRanges",
"jsonlite",
"mime",
"openssl",
"png",
"R6",
"S4Vectors",
"Seqinfo",
"sys",
"XVector"
],
"_vignettes": [
{
"source": "KEGGREST-vignette.Rmd",
"filename": "KEGGREST-vignette.html",
"title": "Accessing the KEGG REST API",
"engine": "knitr::rmarkdown",
"headings": [
"KEGGREST",
"Installation",
"Overview",
"Exploring KEGG Resources with keggList()",
"Get specific entries with keggGet()",
"Search by keywords with keggFind()",
"Convert identifiers with keggConv()",
"Link across databases with keggLink()"
],
"created": "2013-01-02 03:08:13",
"modified": "2026-06-16 16:39:34",
"commits": 15
}
],
"_score": 15.448228813012914,
"_indexed": true,
"_nocasepkg": "keggrest",
"_universes": [
"bioc",
"bioconductor-bot",
"bioconductor"
],
"_binaries": [
{
"r": "4.7.0",
"os": "linux",
"version": "1.53.6",
"date": "2026-09-21T07:14:26.000Z",
"distro": "resolute",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/2a40ec0472ed1e1b7456c52652cb04db85a5fa5a5f8f8acadcf2a226e32171d2",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
},
{
"r": "4.6.1",
"os": "linux",
"version": "1.53.6",
"date": "2026-09-21T07:14:52.000Z",
"distro": "resolute",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/40455bc29cc8f608d8cc0be8b94bc8b95ab2bb70112d7d57dc6ab68692a20506",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
},
{
"r": "4.5.3",
"os": "mac",
"version": "1.53.6",
"date": "2026-09-21T07:13:30.000Z",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/8c304ec64c722f2ac1efecdbc3ca340089e973bac43d67a2820cc711f6e51bdd",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
},
{
"r": "4.6.1",
"os": "mac",
"version": "1.53.6",
"date": "2026-09-21T07:13:06.000Z",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/e9a762f71c946fcc1c32a9dad5daca75bd74559d46811169d2e70b80ff6ba853",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
},
{
"r": "4.6.0",
"os": "wasm",
"version": "1.53.6",
"date": "2026-09-21T07:14:12.000Z",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/4cfde63ec59cc0bef2605545217e86165d977814f17c282e2f91f81358ea35c3",
"status": "success",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
},
{
"r": "4.7.0",
"os": "win",
"version": "1.53.6",
"date": "2026-09-21T07:13:14.000Z",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/982e6b10d280154cd2f057abdc02bc39ba97ced9f12cbac6574579f3d06283ec",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
},
{
"r": "4.5.3",
"os": "win",
"version": "1.53.6",
"date": "2026-09-21T07:12:56.000Z",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/d3189b188b4448a2371c9c7e2c1b2da7c2282e48a5c689f2a1e3e0b7cb3656b2",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
},
{
"r": "4.6.1",
"os": "win",
"version": "1.53.6",
"date": "2026-09-21T07:13:01.000Z",
"commit": "0fbb64c9423f09109e684fb648dac95ae943199d",
"fileid": "https://r2.ropensci.org/029d56f5cbae4875d8bb7139eb21d2f7c1cfde52eda39af3d1f7f1ca292547ac",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/bioc/actions/runs/35571508442"
}
]
}