{
  "_id": "6a1ac90c1d7bb097a09dc488",
  "Package": "KEGGREST",
  "Version": "1.53.0",
  "Title": "Client-side REST access to the Kyoto Encyclopedia of Genes and\nGenomes (KEGG)",
  "Authors@R": "c(\nperson(\"Dan\", \"Tenenbaum\", role = \"aut\"),\nperson(\"Bioconductor Package\", \"Maintainer\", role = c(\"aut\", \"cre\"),\nemail = \"maintainer@bioconductor.org\"),\nperson(\"Martin\", \"Morgan\", role = \"ctb\"),\nperson(\"Kozo\", \"Nishida\", role = \"ctb\"),\nperson(\"Marcel\", \"Ramos\", role = \"ctb\"),\nperson(\"Kristina\", \"Riemer\", role = \"ctb\"),\nperson(\"Lori\", \"Shepherd\", role = \"ctb\"),\nperson(\"Jeremy\", \"Volkening\", role = \"ctb\")\n)",
  "Description": "A package that provides a client interface to the Kyoto\nEncyclopedia of Genes and Genomes (KEGG) REST API. Only for\nacademic use by academic users belonging to academic\ninstitutions (see <https://www.kegg.jp/kegg/rest/>). Note that\nKEGGREST is based on KEGGSOAP by J. Zhang, R. Gentleman, and\nMarc Carlson, and KEGG (python package) by Aurelien Mazurie.",
  "URL": "https://bioconductor.org/packages/KEGGREST",
  "BugReports": "https://github.com/Bioconductor/KEGGREST/issues",
  "License": "Artistic-2.0",
  "VignetteBuilder": "knitr",
  "biocViews": "Annotation, Pathways, ThirdPartyClient, KEGG",
  "RoxygenNote": "7.1.1",
  "Date": "2025-06-18",
  "Config/pak/sysreqs": "libpng-dev libssl-dev zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:37:13 UTC",
  "RemoteUrl": "https://github.com/bioc/KEGGREST",
  "RemoteRef": "HEAD",
  "RemoteSha": "76b4af533900a7be8881e6c31bd5afc488a015a2",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-30 07:49:18 UTC",
    "User": "root"
  },
  "Author": "Dan Tenenbaum [aut],\nBioconductor Package Maintainer [aut, cre],\nMartin Morgan [ctb],\nKozo Nishida [ctb],\nMarcel Ramos [ctb],\nKristina Riemer [ctb],\nLori Shepherd [ctb],\nJeremy Volkening [ctb]",
  "Maintainer": "Bioconductor Package Maintainer <maintainer@bioconductor.org>",
  "MD5sum": "db4495bbe318816c8dafaa9fbf87ac75",
  "_user": "bioc",
  "_type": "src",
  "_file": "KEGGREST_1.53.0.tar.gz",
  "_fileid": "2451777082a60a83e412786c252e4fa4e264b8395aab61cae6e22bbfa4c39d71",
  "_filesize": 143454,
  "_sha256": "2451777082a60a83e412786c252e4fa4e264b8395aab61cae6e22bbfa4c39d71",
  "_created": "2026-05-30T07:49:18.000Z",
  "_published": "2026-05-30T11:25:00.081Z",
  "_jobs": [
    {
      "job": 78634596715,
      "time": 152,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7306615386"
    },
    {
      "job": 78634596720,
      "time": 288,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7306628675"
    },
    {
      "job": 78634596722,
      "time": 313,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306631014"
    },
    {
      "job": 78634596719,
      "time": 227,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7307827424"
    },
    {
      "job": 78634596711,
      "time": 216,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7307825167"
    },
    {
      "job": 78634444213,
      "time": 200,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306600110"
    },
    {
      "job": 78634596712,
      "time": 108,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306610989"
    },
    {
      "job": 78634596738,
      "time": 240,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7306624239"
    },
    {
      "job": 78634596742,
      "time": 209,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "7306621465"
    },
    {
      "job": 78634596743,
      "time": 190,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7306619135"
    }
  ],
  "_bioccheck": {
    "error": 0,
    "warning": 1,
    "note": 11
  },
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/bioc/KEGGREST",
  "_commit": {
    "id": "76b4af533900a7be8881e6c31bd5afc488a015a2",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379833
  },
  "_maintainer": {
    "name": "Bioconductor Package Maintainer",
    "email": "maintainer@bioconductor.org",
    "login": "bioconductor-bot",
    "description": "",
    "uuid": 11681645
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "httr",
      "role": "Imports"
    },
    {
      "package": "png",
      "role": "Imports"
    },
    {
      "package": "Biostrings",
      "role": "Imports"
    },
    {
      "package": "RUnit",
      "role": "Suggests"
    },
    {
      "package": "BiocGenerics",
      "role": "Suggests"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "markdown",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 768,
  "_updates": [
    {
      "week": "2025-25",
      "n": 3
    },
    {
      "week": "2025-41",
      "n": 2
    },
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2025-47",
      "n": 4
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.53.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.52.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "annotation",
    "pathways",
    "thirdpartyclient",
    "kegg",
    "bioconductor-package",
    "core-package"
  ],
  "_stars": 15,
  "_contributors": [
    {
      "user": "dtenenba",
      "count": 68,
      "uuid": 2286826
    },
    {
      "user": "jwokaty",
      "count": 16,
      "uuid": 1744257
    },
    {
      "user": "nturaga",
      "count": 14,
      "uuid": 2746443
    },
    {
      "user": "link-ny",
      "count": 12,
      "uuid": 4392950
    },
    {
      "user": "mtmorgan",
      "count": 10,
      "uuid": 118552
    },
    {
      "user": "lshep",
      "count": 8,
      "uuid": 18724380
    },
    {
      "user": "kristinariemer",
      "count": 4,
      "uuid": 6686508
    },
    {
      "user": "hpages",
      "count": 3,
      "uuid": 8810451
    },
    {
      "user": "dvantwisk",
      "count": 2,
      "uuid": 10927671
    },
    {
      "user": "sonali-bioc",
      "count": 2,
      "uuid": 6373953
    },
    {
      "user": "vobencha",
      "count": 2,
      "uuid": 2466173
    },
    {
      "user": "alisajid",
      "count": 1,
      "uuid": 395482
    },
    {
      "user": "kozo2",
      "count": 1,
      "uuid": 12192
    },
    {
      "user": "jvolkening",
      "count": 1,
      "uuid": 11667655
    },
    {
      "user": "vjcitn",
      "count": 1,
      "uuid": 4624066
    },
    {
      "user": "zielinskipp",
      "count": 1,
      "uuid": 7211781
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 74268,
    "source": "https://www.bioconductor.org/packages/stats/bioc/KEGGREST"
  },
  "_mentions": 75,
  "_devurl": "https://github.com/bioconductor/keggrest",
  "_searchresults": 1216,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/KEGGREST.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/bioconductor/keggrest",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "color.pathway.by.objects",
    "keggCompounds",
    "keggConv",
    "keggFind",
    "keggGet",
    "keggInfo",
    "keggLink",
    "keggList",
    "listDatabases"
  ],
  "_help": [
    {
      "page": "mark.pathway.by.objects",
      "title": "Client-side interface to obtain an url for a KEGG pathway diagram with a given set of genes marked",
      "topics": [
        "color.pathway.by.objects"
      ]
    },
    {
      "page": "keggCompounds",
      "title": "Get list of compounds IDs for pathway",
      "topics": [
        "keggCompounds"
      ]
    },
    {
      "page": "keggConv",
      "title": "Convert KEGG identifiers to/from outside identifiers",
      "topics": [
        "bconv",
        "conv",
        "keggConv"
      ]
    },
    {
      "page": "keggFind",
      "title": "Finds entries with matching query keywords or other query data in a given database",
      "topics": [
        "keggFind"
      ]
    },
    {
      "page": "keggGet",
      "title": "Retrieves given database entries",
      "topics": [
        "keggGet"
      ]
    },
    {
      "page": "keggInfo",
      "title": "Displays the current statistics of a given database",
      "topics": [
        "info",
        "keggInfo"
      ]
    },
    {
      "page": "keggLink",
      "title": "Find related entries by using database cross-references.",
      "topics": [
        "keggLink",
        "link"
      ]
    },
    {
      "page": "keggList",
      "title": "Returns a list of entry identifiers and associated definition for a given database or a given set of database entries.",
      "topics": [
        "keggList"
      ]
    },
    {
      "page": "listDatabases",
      "title": "Lists the KEGG databases which may be searched.",
      "topics": [
        "listDatabases"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/KEGGREST/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "BiocGenerics",
    "Biostrings",
    "crayon",
    "curl",
    "generics",
    "httr",
    "IRanges",
    "jsonlite",
    "mime",
    "openssl",
    "png",
    "R6",
    "S4Vectors",
    "Seqinfo",
    "sys",
    "XVector"
  ],
  "_vignettes": [
    {
      "source": "KEGGREST-vignette.Rmd",
      "filename": "KEGGREST-vignette.html",
      "title": "Accessing the KEGG REST API",
      "engine": "knitr::rmarkdown",
      "headings": [
        "KEGGREST",
        "Installation",
        "Overview",
        "Exploring KEGG Resources with keggList()",
        "Get specific entries with keggGet()",
        "Search by keywords with keggFind()",
        "Convert identifiers with keggConv()",
        "Link across databases with keggLink()"
      ],
      "created": "2013-01-02 03:08:13",
      "modified": "2024-06-17 15:20:23",
      "commits": 14
    }
  ],
  "_score": 15.068340305211729,
  "_indexed": true,
  "_nocasepkg": "keggrest",
  "_universes": [
    "bioc",
    "bioconductor-bot",
    "bioconductor"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.53.0",
      "date": "2026-05-30T07:51:51.000Z",
      "distro": "noble",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "e96e39f1e40b727d0a4229c5e78db2fe6c2e7f49f77bc257e34d3a7349d09465",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.53.0",
      "date": "2026-05-30T07:52:22.000Z",
      "distro": "noble",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "17a2b84b6de287e314cbfc24a87b5551eb8c2c49ab57bb959b28ec473865ccb8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.53.0",
      "date": "2026-05-30T11:22:31.000Z",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "82264cefc5f23dffb993f0937734651d5b614f6bef07dcd4a46b1f0f3a37d059",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.53.0",
      "date": "2026-05-30T11:22:13.000Z",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "37d274ba107386c8745b62fa7e8333f703fe090819bb9f92aff108d23c1c626c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.53.0",
      "date": "2026-05-30T07:51:30.000Z",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "13cacfed4e1c1e4dcfd6c2ca4c44e068433eaa46ef8a598fc4b8e0c50a1abdc0",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.53.0",
      "date": "2026-05-30T07:51:21.000Z",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "b4f76fffbc178ab2aeb28b16c895787a8773f1ff672ff8bcb89e8d6a02ae0f79",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.53.0",
      "date": "2026-05-30T07:50:58.000Z",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "72772907ec9d6c0978c39a40a1e1c007414eb982e2e44c2f6d1845f73342ab29",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.53.0",
      "date": "2026-05-30T07:50:47.000Z",
      "commit": "76b4af533900a7be8881e6c31bd5afc488a015a2",
      "fileid": "b425e1b1253e4dd8386b7b98f9a5a70355d6d6313a7ca69687d80dabd2ffd2aa",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678424923"
    }
  ]
}