{
  "_id": "6a494755a788432aeabf3cc4",
  "Package": "Informeasure",
  "Type": "Package",
  "Title": "R implementation of information measures",
  "Version": "1.23.0",
  "Authors@R": "c(person(given = \"Chu\", family = \"Pan\", role = c(\"aut\", \"cre\"), email = \"chu.pan@hnu.edu.cn\"))",
  "Description": "This package consolidates a comprehensive set of\ninformation measurements, encompassing mutual information,\nconditional mutual information, interaction information,\npartial information decomposition, and part mutual information.",
  "License": "Artistic-2.0",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.1",
  "biocViews": "GeneExpression, NetworkInference, Network, Software",
  "VignetteBuilder": "knitr",
  "URL": "https://github.com/chupan1218/Informeasure",
  "BugReports": "https://github.com/chupan1218/Informeasure/issues",
  "Config/testthat/edition": "3",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:53:52 UTC",
  "RemoteUrl": "https://github.com/bioc/Informeasure",
  "RemoteRef": "HEAD",
  "RemoteSha": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-03 06:01:53 UTC",
    "User": "root"
  },
  "Author": "Chu Pan [aut, cre]",
  "Maintainer": "Chu Pan <chu.pan@hnu.edu.cn>",
  "_user": "bioc",
  "_type": "src",
  "_file": "Informeasure_1.23.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/687188aa800c8ac273199191cf529ac7a0d08bdef9c71d7f6b51a91b28691de3",
  "_filesize": 195078,
  "_sha256": "687188aa800c8ac273199191cf529ac7a0d08bdef9c71d7f6b51a91b28691de3",
  "_expires": "2026-10-12T17:48:03.000Z",
  "_created": "2026-07-03T06:01:53.000Z",
  "_published": "2026-07-04T17:48:05.383Z",
  "_bioccheck": {
    "error": 0,
    "warning": 1,
    "note": 5
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676",
  "_status": "success",
  "_upstream": "https://github.com/bioc/Informeasure",
  "_commit": {
    "id": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777380832
  },
  "_maintainer": {
    "name": "Chu Pan",
    "email": "chu.pan@hnu.edu.cn",
    "login": "panlabgithub",
    "description": "",
    "uuid": 68934423
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 85153554791,
      "time": 142,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8058979753"
    },
    {
      "job": 85153554757,
      "time": 244,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8059004981"
    },
    {
      "job": 85153554813,
      "time": 137,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8058978572"
    },
    {
      "job": 85153554818,
      "time": 105,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8058970434"
    },
    {
      "job": 85153554840,
      "time": 81,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8058964053"
    },
    {
      "job": 85153554749,
      "time": 172,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8058944067"
    },
    {
      "job": 85153554907,
      "time": 110,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8058971684"
    },
    {
      "job": 85153554803,
      "time": 78,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8058963477"
    },
    {
      "job": 85153554976,
      "time": 68,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8058961186"
    },
    {
      "job": 85153554827,
      "time": 68,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8058961204"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.0",
      "role": "Depends"
    },
    {
      "package": "entropy",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "SummarizedExperiment",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.23.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.22.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "geneexpression",
    "networkinference",
    "network",
    "software"
  ],
  "_stars": 3,
  "_contributors": [
    {
      "user": "chupan1218",
      "count": 70,
      "uuid": 32110962
    },
    {
      "user": "nturaga",
      "count": 2,
      "uuid": 2746443
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 445,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_devurl": "https://github.com/chupan1218/informeasure",
  "_searchresults": 4,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/Informeasure.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/chupan1218/informeasure",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "CMI.measure",
    "CMI.plugin",
    "discretize1D",
    "discretize1d.uniform_frequency",
    "discretize1d.uniform_width",
    "discretize2D",
    "discretize2d.uniform_frequency",
    "discretize2d.uniform_width",
    "discretize3D",
    "discretize3d.uniform_frequency",
    "discretize3d.uniform_width",
    "II.measure",
    "II.plugin",
    "MI.measure",
    "MI.plugin",
    "PID.measure",
    "PID.plugin",
    "PMI.measure",
    "PMI.plugin"
  ],
  "_help": [
    {
      "page": "CMI.measure",
      "title": "A comprehensive function for estimating conditional mutual information",
      "topics": [
        "CMI.measure"
      ]
    },
    {
      "page": "CMI.plugin",
      "title": "A plug-in calculator for evaluating conditional mutual information",
      "topics": [
        "CMI.plugin"
      ]
    },
    {
      "page": "discretize1D",
      "title": "Discretize one-dimensional continuous data into bins",
      "topics": [
        "discretize1D"
      ]
    },
    {
      "page": "discretize1d.uniform_frequency",
      "title": "Discretize a set of continuous data into 1-dimensional bins by uniform frequency",
      "topics": [
        "discretize1d.uniform_frequency"
      ]
    },
    {
      "page": "discretize1d.uniform_width",
      "title": "Discretize a set of continuous data into 1-dimensional bins by \"uniform width\" method",
      "topics": [
        "discretize1d.uniform_width"
      ]
    },
    {
      "page": "discretize2D",
      "title": "Discretize 2-dimensional continuous data into bins",
      "topics": [
        "discretize2D"
      ]
    },
    {
      "page": "discretize2d.uniform_frequency",
      "title": "Discretize two sets of continuous data into 2-dimensional bins by uniform frequency",
      "topics": [
        "discretize2d.uniform_frequency"
      ]
    },
    {
      "page": "discretize2d.uniform_width",
      "title": "Discretize two sets of continuous data into 2-dimensional bins by \"uniform width\" method",
      "topics": [
        "discretize2d.uniform_width"
      ]
    },
    {
      "page": "discretize3D",
      "title": "Discretize 3-dimensional continuous data into bins",
      "topics": [
        "discretize3D"
      ]
    },
    {
      "page": "discretize3d.uniform_frequency",
      "title": "Discretize three sets of continuous data into 3-dimensional bins by uniform frequency",
      "topics": [
        "discretize3d.uniform_frequency"
      ]
    },
    {
      "page": "discretize3d.uniform_width",
      "title": "Discretize three sets of continuous data into 3-dimensional bins by \"uniform width\" method",
      "topics": [
        "discretize3d.uniform_width"
      ]
    },
    {
      "page": "II.measure",
      "title": "A comprehensive function for evaluating interaction information",
      "topics": [
        "II.measure"
      ]
    },
    {
      "page": "II.plugin",
      "title": "A plug-in calculator for evaluating the interaction information",
      "topics": [
        "II.plugin"
      ]
    },
    {
      "page": "MI.measure",
      "title": "A comprehensive function for evaluating mutual information",
      "topics": [
        "MI.measure"
      ]
    },
    {
      "page": "MI.plugin",
      "title": "A plug-in calculator for evaluating mutual information",
      "topics": [
        "MI.plugin"
      ]
    },
    {
      "page": "PID.measure",
      "title": "A comprehensive function for evaluating the partial information decomposition",
      "topics": [
        "PID.measure"
      ]
    },
    {
      "page": "PID.plugin",
      "title": "A plug-in calculator for evaluating partial information decomposition",
      "topics": [
        "PID.plugin"
      ]
    },
    {
      "page": "PMI.measure",
      "title": "A comprehensive function for evaluating part mutual information",
      "topics": [
        "PMI.measure"
      ]
    },
    {
      "page": "PMI.plugin",
      "title": "A plug-in calculator for evaluating the part mutual information",
      "topics": [
        "PMI.plugin"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/Informeasure/raw/HEAD/README.md",
  "_rundeps": [
    "entropy"
  ],
  "_vignettes": [
    {
      "source": "Informeasure.Rmd",
      "filename": "Informeasure.html",
      "title": "Informeasure: a tool to quantify nonlinear dependence between variables in biological regulatory networks from an information theory perspective",
      "author": "//\\ Chu PAN //\\ College of Computer Science and Electronic Engineering, Hunan University",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Main functions demonstration",
        "MI.measure(): mutual information",
        "CMI.measure(): conditional mutual informaiton",
        "II.measure(): interaction information",
        "PID.measure(): partial information decomposition",
        "PMI.measure(): part mutual information",
        "Conclusions",
        "Acknowledgement",
        "References",
        "Session information"
      ],
      "created": "2020-08-03 02:45:23",
      "modified": "2024-02-13 20:13:23",
      "commits": 11
    }
  ],
  "_score": 4.477121254719663,
  "_indexed": true,
  "_nocasepkg": "informeasure",
  "_universes": [
    "bioc",
    "panlabgithub",
    "chupan1218"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.23.0",
      "date": "2026-07-03T06:06:04.000Z",
      "distro": "resolute",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/6a32099924b1e20cf0940a0590eab732d299dcb2c625a451d626a8b432caf2f2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.23.0",
      "date": "2026-07-03T06:04:17.000Z",
      "distro": "resolute",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/82a2f294fd3150f0c5dffd144cbb5eed3be15bacf32b8852a5639b6a9f6ca6b1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.23.0",
      "date": "2026-07-03T06:03:46.000Z",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/0d9b3ee92847d498c0292176c68d83b1dd0854fe094b288eeae011faa18f2d83",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.23.0",
      "date": "2026-07-03T06:03:22.000Z",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/0f59377aaadbffd47d52b975e9042f22feeb3928321e47881cf619dab2866238",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.23.0",
      "date": "2026-07-03T06:04:01.000Z",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/8241a0c1b40f8f2ec5fe982491c04bbc4fd578b86a6fcfafdc668d9ef2cfd319",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.23.0",
      "date": "2026-07-03T06:03:13.000Z",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/d3a66040dd65b8e4583b9e6982d3a8c1713160b1bc9b9f1f2a5f3235aca8bba1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.23.0",
      "date": "2026-07-03T06:03:04.000Z",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/77125329ac1226504d905e14c7e426266742c1ece2617b7129d58a0239ba1a5e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.23.0",
      "date": "2026-07-03T06:03:04.000Z",
      "commit": "4fbdc6377c68ae536b90cf07edf26212e1d1e016",
      "fileid": "https://r2.ropensci.org/71a25d3cfe8486f18a15d8d66ce3b43ef1d6b8eb4e4160c61c4ca32417c240cf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28641632676"
    }
  ]
}