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"Brick_fetch_row_vector" ] }, { "page": "Brick_get_bintable", "title": "Returns the binning table associated to the Hi-C experiment.", "topics": [ "Brick_get_bintable" ] }, { "page": "Brick_get_chrominfo", "title": "Get the chrominfo for the Hi-C experiment.", "topics": [ "Brick_get_chrominfo" ] }, { "page": "Brick_get_entire_matrix", "title": "Return an entire matrix for provided chromosome pair for a resolution.", "topics": [ "Brick_get_entire_matrix" ] }, { "page": "Brick_get_matrix", "title": "Return a matrix subset.", "topics": [ "Brick_get_matrix" ] }, { "page": "Brick_get_matrix_mcols", "title": "Get the matrix metadata columns in the Brick store.", "topics": [ "Brick_get_matrix_mcols" ] }, { "page": "Brick_get_matrix_within_coords", "title": "Return a matrix subset between two regions.", "topics": [ "Brick_get_matrix_within_coords" ] }, { "page": "Brick_get_ranges", "title": "Fetch the ranges associated to a rangekey or chromosome.", "topics": [ "Brick_get_ranges" ] }, { 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] }, { "page": "Brick_list_ranges_mcols", "title": "Find out what metadata columns are associated to a ranges with a certain name", "topics": [ "Brick_list_ranges_mcols" ] }, { "page": "Brick_load_cis_matrix_till_distance", "title": "Load a NxN dimensional sub-distance _cis_ matrix into the Brick store.", "topics": [ "Brick_load_cis_matrix_till_distance" ] }, { "page": "Brick_load_data_from_mcool", "title": "Load a NxN dimensional matrix into the Brick store from an mcool file.", "topics": [ "Brick_load_data_from_mcool" ] }, { "page": "Brick_load_data_from_sparse", "title": "Identify compartments in the Hi-C data", "topics": [ "Brick_load_data_from_sparse" ] }, { "page": "Brick_load_matrix", "title": "Load a NxM dimensional matrix into the Brick store.", "topics": [ "Brick_load_matrix" ] }, { "page": "Brick_local_score_differentiator", "title": "Do TAD Calls with Local Score Differentiator on a Hi-C matrix", "topics": [ "Brick_local_score_differentiator" ] }, { "page": 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