{
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  "Package": "HELP",
  "Version": "1.71.0",
  "Date": "2009-09-30",
  "Title": "Tools for HELP data analysis",
  "Author": "Reid F. Thompson <reid.thompson@gmail.com>, John M. Greally\n<john.greally@einstein.yu.edu>, with contributions from Mark\nReimers <mreimers@vcu.edu>",
  "Maintainer": "Reid F. Thompson <reid.thompson@gmail.com>",
  "Description": "The package contains a modular pipeline for analysis of\nHELP microarray data, and includes graphical and mathematical\ntools with more general applications.",
  "License": "GPL (>= 2)",
  "biocViews": "CpGIsland, DNAMethylation, Microarray, TwoChannel,\nDataImport, QualityControl, Preprocessing, Visualization",
  "Repository": "https://bioc.r-universe.dev",
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    "User": "root"
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  "_type": "src",
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    "warning": 2,
    "note": 11
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    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
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      ]
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      "title": "Calculate GC percent (methods)",
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    {
      "page": "calcTm",
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      ]
    },
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    },
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    },
    {
      "page": "exprs2",
      "title": "Retrieve microarray data (for signal channel 2) from ExpressionSets",
      "topics": [
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        "exprs2<-"
      ]
    },
    {
      "page": "exprs2-methods",
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        "exprs2,missing-method",
        "exprs2-methods",
        "exprs2<-,ExpressionSet,matrix-method",
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      ]
    },
    {
      "page": "fuzzyMatches",
      "title": "Fuzzy matching",
      "topics": [
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      ]
    },
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        "getFeatures,AnnotatedDataFrame,vector-method",
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        "getFeatures,ExpressionSet,NULL-method",
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        "getSamples,ExpressionSet,NULL-method",
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      "page": "plotBins",
      "title": "Plot bins",
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    },
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    },
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      "title": "Plot chip image",
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      ]
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    {
      "page": "plotFeature",
      "title": "Plot feature versus two-color intensity",
      "topics": [
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