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        "sort,GTuples-method",
        "sort.GTuples"
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    },
    {
      "page": "GTuplesList-class",
      "title": "GTuplesList objects",
      "topics": [
        "class:GTuplesList",
        "coerce,GTuplesList,data.frame-method",
        "coerce,GTuplesList,GRangesList-method",
        "coerce,GTuplesList,list-method",
        "elementMetadata,GTuplesList-method",
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        "seqnames,GTuplesList-method",
        "seqnames<-,GTuplesList-method",
        "size,GTuplesList-method",
        "start,GTuplesList-method",
        "start<-,GTuplesList-method",
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      "page": "intra-tuple-methods",
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        "shift,GTuplesList-method",
        "trim,GTuples-method"
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    },
    {
      "page": "nearest-methods",
      "title": "Finding the nearest genomic tuple/range neighbour",
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        "distanceToNearest,GTuples,GTuples-method",
        "distanceToNearest,GTuples,missing-method",
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      "page": "tuples-squeezers",
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      "topics": [
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    },
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  "_readme": "https://github.com/bioc/GenomicTuples/raw/HEAD/README.md",
  "_rundeps": [
    "BiocGenerics",
    "data.table",
    "generics",
    "GenomicRanges",
    "IRanges",
    "Rcpp",
    "S4Vectors",
    "Seqinfo"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "GenomicTuplesIntroduction.Rmd",
      "filename": "GenomicTuplesIntroduction.html",
      "title": "GenomicTuples: Classes and Methods",
      "author": "Peter Hickey",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "What is a genomic tuple?",
        "When might you need a genomic tuple?",
        "GTuples",
        "GTuples methods",
        "Basic GTuples accessors",
        "Splitting and combining GTuples objects}",
        "Subsetting GTuples objects",
        "Basic tuple operations for GTuples objects",
        "Intra-tuple operations",
        "Inter-tuple operations",
        "Interval set operations for GTuples objects",
        "Additional methods unique to GTuples",
        "Implementation details",
        "GTuplesList",
        "GTuplesList methods",
        "Basic GTuplesList accessors}",
        "Combining GTuplesList objects",
        "Subsetting GTuplesList objects",
        "Basic tuple operations for GTuplesList objects",
        "Interval set operations for GTuplesList objects",
        "Looping over GTuplesList objects",
        "Additional methods unique to GTuplesList",
        "findOverlaps-based methods",
        "Definition of overlapping genomic tuples",
        "Definition of overlapping genomic tuples and ranges",
        "Examples",
        "Comparison of genomic tuples",
        "Definition of comparison methods for genomic tuples",
        "Acknowledgements",
        "Session info",
        "References"
      ],
      "created": "2015-02-12 11:06:38",
      "modified": "2016-05-26 18:54:14",
      "commits": 10
    }
  ],
  "_score": 5.3979400086720375,
  "_indexed": true,
  "_nocasepkg": "genomictuples",
  "_universes": [
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    "petehaitch"
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