{ "_id": "6a103d43acfb0bcc41c9c374", "Package": "GeneTonic", "Title": "Enjoy Analyzing And Integrating The Results From Differential\nExpression Analysis And Functional Enrichment Analysis", "Version": "3.7.0", "Date": "2025-09-23", "Authors@R": "c(\nperson(\ngiven = \"Federico\", family = \"Marini\", role = c(\"aut\", \"cre\"),\nemail = \"marinif@uni-mainz.de\", comment = c(ORCID = \"0000-0003-3252-7758\")\n),\nperson(\ngiven = \"Annekathrin\", family = \"Nedwed\", role = c(\"aut\"),\nemail = \"anneludt@uni-mainz.de\", comment = c(ORCID = \"0000-0002-2475-4945\")\n),\nperson(\ngiven = \"Edoardo\", family = \"Filippi\", role = c(\"ctb\"),\nemail = \"edoardo.filippi@uni-mainz.de\", comment = c(ORCID = \"0009-0003-9858-0137\")\n)\n)", "Description": "This package provides functionality to combine the\nexisting pieces of the transcriptome data and results, making\nit easier to generate insightful observations and hypothesis.\nIts usage is made easy with a Shiny application, combining the\nbenefits of interactivity and reproducibility e.g. by capturing\nthe features and gene sets of interest highlighted during the\nlive session, and creating an HTML report as an artifact where\ntext, code, and output coexist. Using the GeneTonicList as a\nstandardized container for all the required components, it is\npossible to simplify the generation of multiple visualizations\nand summaries.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "VignetteBuilder": "knitr", "URL": "https://github.com/federicomarini/GeneTonic", "BugReports": "https://github.com/federicomarini/GeneTonic/issues", "RoxygenNote": "7.3.3", "Roxygen": "list(markdown = TRUE)", "biocViews": "GUI, GeneExpression, Software, Transcription,\nTranscriptomics, Visualization, DifferentialExpression,\nPathways, ReportWriting, GeneSetEnrichment, Annotation, GO,\nShinyApps", "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libglpk-dev make libbz2-dev libicu-dev\nliblzma-dev libpng-dev libuv1-dev libxml2-dev libssl-dev perl\nxz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:51:46 UTC", "RemoteUrl": "https://github.com/bioc/GeneTonic", "RemoteRef": "HEAD", 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