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"GSALightning: Ultra-fast Permutation-based Gene Set Analysis", "author": "Billy Heung Wing Chang", "engine": "knitr::rmarkdown", "headings": [ "1. Introduction", "2. Installation and Quick Start", "2.1 Installing GSALightning", "2.2 Running GSALightning", "3. The Inputs for GSALight()", "4. GSALight()", "4.1 Preliminiary Data Check", "4.2 Most Commonly Considered Arguments for GSALight()", "4.3 The Maxmean, Mean, and Absolute Mean Statistics", "4.4 Outputs of GSALight()", "4.5 Default Number of Permutations", "4.6 Restandardization", "5. 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