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  "Title": "Using self-organizing maps for visualization and interpretation\nof cytometry data",
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    },
    {
      "page": "PlotCenters",
      "title": "PlotCenters",
      "topics": [
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    },
    {
      "page": "PlotClusters2D",
      "title": "PlotClusters2D",
      "topics": [
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    },
    {
      "page": "PlotDimRed",
      "title": "PlotDimRed",
      "topics": [
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    },
    {
      "page": "PlotFileScatters",
      "title": "PlotFileScatters",
      "topics": [
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    },
    {
      "page": "PlotFlowSOM",
      "title": "PlotFlowSOM",
      "topics": [
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    },
    {
      "page": "PlotGroups",
      "title": "PlotGroups",
      "topics": [
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    {
      "page": "PlotLabels",
      "title": "PlotLabels",
      "topics": [
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    },
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      "title": "PlotManualBars",
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    },
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      "page": "PlotMarker",
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    },
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    },
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      "page": "PlotNode",
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    },
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      "page": "PlotNumbers",
      "title": "PlotNumbers",
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    },
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      "page": "PlotPies",
      "title": "PlotPies",
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      "page": "PlotSD",
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      "page": "PlotStarLegend",
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      "page": "PlotStars",
      "title": "PlotStars",
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      "page": "print.FlowSOM",
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      "topics": [
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    },
    {
      "page": "Purity",
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      "topics": [
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    },
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      "page": "query_multiple",
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    },
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    },
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      "page": "ReadInput",
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      "topics": [
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    },
    {
      "page": "SaveClustersToFCS",
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      "topics": [
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      "title": "ScaleStarHeights",
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    },
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    },
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      "page": "UpdateNodeSize",
      "title": "UpdateNodeSize",
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      "source": "FlowSOM.Rnw",
      "filename": "FlowSOM.pdf",
      "title": "FlowSOM",
      "engine": "utils::Sweave",
      "headings": [
        "1 Installation",
        "2 Preprocessing",
        "3 The easy way",
        "4 Reading the data",
        "5 Building the self-organizing map",
        "6 Building the minimal spanning tree",
        "7 Meta-clustering the data",
        "8 Detecting nodes with a specific pattern",
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        "10 Summary"
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      "created": "2016-09-06 07:31:44",
      "modified": "2025-12-22 10:20:34",
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