{ "_id": "6a1ad44f1d7bb097a09e4080", "Package": "DFplyr", "Title": "A `DataFrame` (`S4Vectors`) backend for `dplyr`", "Version": "1.7.0", "Authors@R": "c(person(\"Jonathan\", \"Carroll\", \nemail = \"rpkg@jcarroll.com.au\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-1404-5264\")),\nperson(\"Pierre-Paul\", \"Axisa\", role=c(\"ctb\")))", "Description": "Provides `dplyr` verbs (`mutate`, `select`, `filter`,\netc...) supporting `S4Vectors::DataFrame` objects. Importantly,\nthis is achieved without conversion to an intermediate\n`tibble`. Adds grouping infrastructure to `DataFrame` which is\nrespected by the transformation verbs.", "biocViews": "DataRepresentation, Infrastructure, Software", "License": "GPL-3", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "URL": "https://github.com/jonocarroll/DFplyr", "BugReports": "https://github.com/jonocarroll/DFplyr/issues", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Roxygen": "list(markdown = TRUE)", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 13:03:59 UTC", "RemoteUrl": "https://github.com/bioc/DFplyr", "RemoteRef": "HEAD", "RemoteSha": "05a28e94a810a23e17e6a89f572e9beffaee9637", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 08:41:51 UTC", "User": "root" }, "Author": "Jonathan Carroll [aut, cre] (ORCID:\n),\nPierre-Paul Axisa [ctb]", "Maintainer": "Jonathan Carroll ", "MD5sum": "04a0ceec9b9b9637868004d4ad362206", "_user": "bioc", "_type": "src", "_file": "DFplyr_1.7.0.tar.gz", "_fileid": "898c6918d8e6d10a025b3305a1fef99a75a4a1388089bae500a7452ba2e5280f", "_filesize": 387948, "_sha256": "898c6918d8e6d10a025b3305a1fef99a75a4a1388089bae500a7452ba2e5280f", "_created": "2026-05-30T08:41:51.000Z", "_published": "2026-05-30T12:13:03.277Z", "_jobs": [ { "job": 78637264674, "time": 149, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7306921377" }, { "job": 78637264678, "time": 202, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7306926321" }, { "job": 78637264695, "time": 210, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7306926991" }, { "job": 78637264683, "time": 128, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7308070171" }, { "job": 78637264686, "time": 133, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7308080647" }, { "job": 78637109019, "time": 181, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7306906803" }, { "job": 78637264688, "time": 105, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7306917109" }, { "job": 78637264690, "time": 113, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7306917973" }, { "job": 78637264687, "time": 110, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7306917682" }, { "job": 78637264692, "time": 106, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7306917326" } ], "_bioccheck": { "error": 1, "warning": 1, "note": 3 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/DFplyr", "_commit": { "id": "05a28e94a810a23e17e6a89f572e9beffaee9637", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777381439 }, "_maintainer": { "name": "Jonathan Carroll", "email": "rpkg@jcarroll.com.au", "login": "jonocarroll", "mastodon": "@jonocarroll@fosstodon.org", "twitter": "@carroll_jono", "description": "Recovering theoretical physicist / ongoing coffee addict / continually improving data scientist. I'm interested in open-source data projects, mainly in R.", "uuid": 9496865, "orcid": "0000-0002-1404-5264" }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "dplyr", "role": "Depends" }, { "package": "BiocGenerics", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "S4Vectors", "role": "Imports" }, { "package": "tidyselect", "role": "Imports" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "GenomeInfoDb", "role": "Suggests" }, { "package": "GenomicRanges", "role": "Suggests" }, { "package": "IRanges", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "sessioninfo", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "tibble", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2025-39", "n": 3 }, { "week": "2026-07", "n": 4 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.7.0", "bioc": "3.24" }, { "branch": "release", "version": "1.6.0", "bioc": "3.23" } ], "_topics": [ "datarepresentation", "infrastructure", "software" ], "_stars": 21, "_contributors": [ { "user": "jonocarroll", "count": 70, "uuid": 9496865 }, { "user": "jwokaty", "count": 6, "uuid": 1744257 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 246, "source": "https://www.bioconductor.org/packages/stats/bioc/DFplyr" }, "_devurl": "https://github.com/jonocarroll/dfplyr", "_searchresults": 14, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/DFplyr.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/jonocarroll/dfplyr", "_realowner": "bioc", "_cranurl": false, "_exports": [ "bindROWS", "desc", "rename", "rename2" ], "_help": [ { "page": "DFplyr-package", "title": "Treat a 'S4Vectors::DataFrame' as a 'dplyr' data source", "topics": [ "DFplyr-package", "DFplyr" ] }, { "page": "sub-GroupedDataFrame-method", "title": "Subset a DataFrame", "topics": [ "[,GroupedDataFrame-method" ] }, { "page": "arrange.DataFrame", "title": "Order rows using column values", "topics": [ "arrange.DataFrame" ] }, { "page": "bindROWS-GroupedDataFrame-method", "title": "rbind DataFrames", "topics": [ "bindROWS,GroupedDataFrame-method" ] }, { "page": "count.DataFrame", "title": "Count the observations in each group", "topics": [ "count.DataFrame" ] }, { "page": "desc", "title": "Descending order", "topics": [ "desc" ] }, { "page": "distinct.DataFrame", "title": "Keep distinct/unique rows", "topics": [ "distinct.DataFrame" ] }, { "page": "filter.DataFrame", "title": "Keep or drop rows that match a condition", "topics": [ "filter.DataFrame" ] }, { "page": "filter.GroupedDataFrame", "title": "Keep or drop rows that match a condition", "topics": [ "filter.GroupedDataFrame" ] }, { "page": "format.DataFrame", "title": "Encode in a Common Format", "topics": [ "format.DataFrame" ] }, { "page": "group_by_drop_default.DataFrame", "title": "Default value for .drop argument of group_by", "topics": [ "group_by_drop_default.DataFrame" ] }, { "page": "group_by.DataFrame", "title": "Group by one or more variables", "topics": [ "group_by.DataFrame" ] }, { "page": "group_by.GroupedDataFrame", "title": "Group by one or more variables", "topics": [ "group_by.GroupedDataFrame" ] }, { "page": "group_data.DataFrame", "title": "Grouping metadata", "topics": [ "group_data.DataFrame" ] }, { "page": "group_vars.DataFrame", "title": "Grouping metadata", "topics": [ "group_vars.DataFrame" ] }, { "page": "group_vars.GroupedDataFrame", "title": "Grouping metadata", "topics": [ "group_vars.GroupedDataFrame" ] }, { "page": "mutate.DataFrame", "title": "Create, modify, and delete columns", "topics": [ "mutate.DataFrame" ] }, { "page": "pull.DataFrame", "title": "Extract a single column", "topics": [ "pull.DataFrame" ] }, { "page": "rename-DataFrame-method", "title": "Rename Columns of a DataFrame", "topics": [ "rename,DataFrame-method" ] }, { "page": "rename2", "title": "Rename Columns of a DataFrame (deprecated)", "topics": [ "rename2" ] }, { "page": "select.DataFrame", "title": "Keep or drop columns using their names and types", "topics": [ "select.DataFrame" ] }, { "page": "slice.DataFrame", "title": "Subset rows using their positions", "topics": [ "slice.DataFrame" ] }, { "page": "summarise.DataFrame", "title": "Summarise each group down to one row", "topics": [ "summarise.DataFrame" ] }, { "page": "summarize.DataFrame", "title": "Summarise each group down to one row", "topics": [ "summarize.DataFrame" ] }, { "page": "tally.DataFrame", "title": "Count the observations in each group", "topics": [ "tally.DataFrame" ] }, { "page": "tbl_vars.DataFrame", "title": "List variables provided by a tbl.", "topics": [ "tbl_vars.DataFrame" ] }, { "page": "ungroup.DataFrame", "title": "Group by one or more variables", "topics": [ "ungroup.DataFrame" ] }, { "page": "ungroup.GroupedDataFrame", "title": "Group by one or more variables", "topics": [ "ungroup.GroupedDataFrame" ] } ], "_readme": "https://github.com/bioc/DFplyr/raw/HEAD/README.md", "_rundeps": [ "BiocGenerics", "cli", "dplyr", "generics", "glue", "lifecycle", "magrittr", "pillar", "pkgconfig", "R6", "rlang", "S4Vectors", "tibble", "tidyselect", "utf8", "vctrs", "withr" ], "_vignettes": [ { "source": "example_usage.Rmd", "filename": "example_usage.html", "title": "Example Usage", "author": "Jonathan Carroll", "engine": "knitr::rmarkdown", "headings": [ "Basics", "Install DFplyr", "Background", "Quick start to using DFplyr", "Citing DFplyr", "Session Information." ], "created": "2024-09-11 12:42:51", "modified": "2026-02-15 06:41:28", "commits": 9 } ], "_score": 6.121559844187502, "_indexed": true, "_nocasepkg": "dfplyr", "_universes": [ "bioc", "jonocarroll" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.7.0", "date": "2026-05-30T08:44:52.000Z", "distro": "noble", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "6fe1c94bafeb1259131c74f0aae50ba72c63abe4fc68817c661123e2ef079373", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" }, { "r": "4.6.0", "os": "linux", "version": "1.7.0", "date": "2026-05-30T08:44:58.000Z", "distro": "noble", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "79747e7bd55472f57145ba95642497af4ba3ea4efb6e376a4889588996bff89a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" }, { "r": "4.5.3", "os": "mac", "version": "1.7.0", "date": "2026-05-30T12:10:11.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "9556edc1c4398987e0e35080e55ce8357972ba0aceb97f80804765e47d1c6cb8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" }, { "r": "4.6.0", "os": "mac", "version": "1.7.0", "date": "2026-05-30T12:12:06.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "d545cf44db8c1e4cb21a1a6d668d4d9b9e8feca3bf9ae8ed9d0cf99ddb62f76d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" }, { "r": "4.6.0", "os": "wasm", "version": "1.7.0", "date": "2026-05-30T08:44:00.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "de91d7dc37c6ebed2217183447a1a0a78b17457a270b0122131cb2d0f05825b6", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" }, { "r": "4.7.0", "os": "win", "version": "1.7.0", "date": "2026-05-30T08:43:14.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "bd031bbd2879c6da0f895d9e6d518529b06248a4c964bed43924be12feaccb82", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" }, { "r": "4.5.3", "os": "win", "version": "1.7.0", "date": "2026-05-30T08:43:12.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "ac1bd22a83698345af4e2567194c9c23dad7088892e6fdc6c577020299880274", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" }, { "r": "4.6.0", "os": "win", "version": "1.7.0", "date": "2026-05-30T08:43:11.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "73059585a660ec52a9a7b2cdabf79c87f21f65a475f536db6e48a4c0a7684cbf", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26679441596" } ] }