{ "_id": "6ae0788d93f02b9aed97a0d0", "Package": "DFplyr", "Title": "A `DataFrame` (`S4Vectors`) backend for `dplyr`", "Version": "1.7.0", "Authors@R": "c(person(\"Jonathan\", \"Carroll\", \nemail = \"rpkg@jcarroll.com.au\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-1404-5264\")),\nperson(\"Pierre-Paul\", \"Axisa\", role=c(\"ctb\")))", "Description": "Provides `dplyr` verbs (`mutate`, `select`, `filter`,\netc...) supporting `S4Vectors::DataFrame` objects. Importantly,\nthis is achieved without conversion to an intermediate\n`tibble`. Adds grouping infrastructure to `DataFrame` which is\nrespected by the transformation verbs.", "biocViews": "DataRepresentation, Infrastructure, Software", "License": "GPL-3", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "URL": "https://github.com/jonocarroll/DFplyr", "BugReports": "https://github.com/jonocarroll/DFplyr/issues", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Roxygen": "list(markdown = TRUE)", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 13:03:59 UTC", "RemoteUrl": "https://github.com/bioc/DFplyr", "RemoteRef": "HEAD", "RemoteSha": "05a28e94a810a23e17e6a89f572e9beffaee9637", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-27 10:05:37 UTC", "User": "root" }, "Author": "Jonathan Carroll [aut, cre] (ORCID:\n),\nPierre-Paul Axisa [ctb]", "Maintainer": "Jonathan Carroll ", "_user": "bioc", "_type": "src", "_file": "DFplyr_1.7.0.tar.gz", "_fileid": "https://r2.ropensci.org/81e5511934744c6553551d5ddca5b83b8e0bc0148a5bb66195ae27cb798aa331", "_filesize": 388437, "_sha256": "81e5511934744c6553551d5ddca5b83b8e0bc0148a5bb66195ae27cb798aa331", "_expires": "2027-02-04T10:10:19.000Z", "_created": "2026-10-27T10:05:37.000Z", "_published": "2026-10-27T10:10:21.579Z", "_upstream": "https://github.com/bioc/DFplyr", "_status": "success", "_maintainer": { "name": "Jonathan Carroll", "email": "rpkg@jcarroll.com.au", "login": "jonocarroll", "mastodon": "@jonocarroll@fosstodon.org", "twitter": "@carroll_jono", "description": "Recovering theoretical physicist / ongoing coffee addict / continually improving data scientist. I'm interested in open-source data projects, mainly in R.", "uuid": 9496865, "orcid": "0000-0002-1404-5264" }, "_jobs": [ { "job": 122127332277, "time": 162, "config": "bioc-checks", "r": "4.6.1", "check": "ERROR", "artifact": "12725017438" }, { "job": 122127332603, "time": 238, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12725097546" }, { "job": 122127332251, "time": 184, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12724972987" }, { "job": 122127332681, "time": 155, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "12724543220" }, { "job": 122127332385, "time": 145, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12725356242" }, { "job": 122125881984, "time": 197, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12724218543" }, { "job": 122127332325, "time": 115, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12724188861" }, { "job": 122127332395, "time": 106, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12724204069" }, { "job": 122127332296, "time": 89, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "12724104379" }, { "job": 122127332436, "time": 113, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12724398675" } ], "_bioccheck": { "error": 1, "warning": 1, "note": 2 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138", "_commit": { "id": "05a28e94a810a23e17e6a89f572e9beffaee9637", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777381439 }, "_distro": "resolute", "_host": "GitHub-Actions", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "dplyr", "role": "Depends" }, { "package": "BiocGenerics", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "S4Vectors", "role": "Imports" }, { "package": "tidyselect", "role": "Imports" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "GenomeInfoDb", "role": "Suggests" }, { "package": "GenomicRanges", "role": "Suggests" }, { "package": "IRanges", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "sessioninfo", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "tibble", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2026-07", "n": 4 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.7.0", "bioc": "3.24", "repository": "bioc" }, { "branch": "release", "version": "1.6.0", "bioc": "3.23", "repository": "bioc" } ], "_topics": [ "datarepresentation", "infrastructure", "software" ], "_stars": 21, "_contributors": [ { "user": "jonocarroll", "count": 78, "uuid": 9496865 }, { "user": "smped", "count": 9, "uuid": 8252496 }, { "user": "jwokaty", "count": 8, "uuid": 1744257 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 479, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 392, "source": "https://www.bioconductor.org/packages/stats/bioc/DFplyr" }, "_devurl": "https://github.com/jonocarroll/dfplyr", "_searchresults": 18, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/DFplyr.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_homeurl": "https://github.com/jonocarroll/dfplyr", "_realowner": "bioc", "_cranurl": false, "_exports": [ "bindROWS", "desc", "rename", "rename2" ], "_help": [ { "page": "DFplyr-package", "title": "Treat a 'S4Vectors::DataFrame' as a 'dplyr' data source", "topics": [ "DFplyr-package", "DFplyr" ] }, { "page": "sub-GroupedDataFrame-method", "title": "Subset a DataFrame", "topics": [ "[,GroupedDataFrame-method" ] }, { "page": "arrange.DataFrame", "title": "Order rows using column values", "topics": [ "arrange.DataFrame" ] }, { "page": "bindROWS-GroupedDataFrame-method", "title": "rbind DataFrames", "topics": [ "bindROWS,GroupedDataFrame-method" ] }, { "page": "count.DataFrame", "title": "Count the observations in each group", "topics": [ "count.DataFrame" ] }, { "page": "desc", "title": "Descending order", "topics": [ "desc" ] }, { "page": "distinct.DataFrame", "title": "Keep distinct/unique rows", "topics": [ "distinct.DataFrame" ] }, { "page": "filter.DataFrame", "title": "Keep or drop rows that match a condition", "topics": [ "filter.DataFrame" ] }, { "page": "filter.GroupedDataFrame", "title": "Keep or drop rows that match a condition", "topics": [ "filter.GroupedDataFrame" ] }, { "page": "format.DataFrame", "title": "Encode in a Common Format", "topics": [ "format.DataFrame" ] }, { "page": "group_by_drop_default.DataFrame", "title": "Default value for .drop argument of group_by", "topics": [ "group_by_drop_default.DataFrame" ] }, { "page": "group_by.DataFrame", "title": "Group by one or more variables", "topics": [ "group_by.DataFrame" ] }, { "page": "group_by.GroupedDataFrame", "title": "Group by one or more variables", "topics": [ "group_by.GroupedDataFrame" ] }, { "page": "group_data.DataFrame", "title": "Grouping metadata", "topics": [ "group_data.DataFrame" ] }, { "page": "group_vars.DataFrame", "title": "Grouping metadata", "topics": [ "group_vars.DataFrame" ] }, { "page": "group_vars.GroupedDataFrame", "title": "Grouping metadata", "topics": [ "group_vars.GroupedDataFrame" ] }, { "page": "mutate.DataFrame", "title": "Create, modify, and delete columns", "topics": [ "mutate.DataFrame" ] }, { "page": "pull.DataFrame", "title": "Extract a single column", "topics": [ "pull.DataFrame" ] }, { "page": "rename-DataFrame-method", "title": "Rename Columns of a DataFrame", "topics": [ "rename,DataFrame-method" ] }, { "page": "rename2", "title": "Rename Columns of a DataFrame (deprecated)", "topics": [ "rename2" ] }, { "page": "select.DataFrame", "title": "Keep or drop columns using their names and types", "topics": [ "select.DataFrame" ] }, { "page": "slice.DataFrame", "title": "Subset rows using their positions", "topics": [ "slice.DataFrame" ] }, { "page": "summarise.DataFrame", "title": "Summarise each group down to one row", "topics": [ "summarise.DataFrame" ] }, { "page": "summarize.DataFrame", "title": "Summarise each group down to one row", "topics": [ "summarize.DataFrame" ] }, { "page": "tally.DataFrame", "title": "Count the observations in each group", "topics": [ "tally.DataFrame" ] }, { "page": "tbl_vars.DataFrame", "title": "List variables provided by a tbl.", "topics": [ "tbl_vars.DataFrame" ] }, { "page": "ungroup.DataFrame", "title": "Group by one or more variables", "topics": [ "ungroup.DataFrame" ] }, { "page": "ungroup.GroupedDataFrame", "title": "Group by one or more variables", "topics": [ "ungroup.GroupedDataFrame" ] } ], "_readme": "https://github.com/bioc/DFplyr/raw/HEAD/README.md", "_rundeps": [ "BiocGenerics", "cli", "dplyr", "generics", "glue", "lifecycle", "magrittr", "pillar", "pkgconfig", "R6", "rlang", "S4Vectors", "tibble", "tidyselect", "utf8", "vctrs", "withr" ], "_vignettes": [ { "source": "example_usage.Rmd", "filename": "example_usage.html", "title": "Example Usage", "author": "Jonathan Carroll", "engine": "knitr::rmarkdown", "headings": [ "Basics", "Install DFplyr", "Background", "Quick start to using DFplyr", "Citing DFplyr", "Session Information." ], "created": "2024-09-11 12:42:51", "modified": "2026-02-15 06:41:28", "commits": 9 } ], "_score": 6.35564305022087, "_indexed": true, "_nocasepkg": "dfplyr", "_universes": [ "bioc", "jonocarroll" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.7.0", "date": "2026-10-27T10:09:12.000Z", "distro": "resolute", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/74a7074937ef2f1ae4fd90646c90af7d5c13cca41648c3e8005c51069667740a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" }, { "r": "4.6.1", "os": "linux", "version": "1.7.0", "date": "2026-10-27T10:08:34.000Z", "distro": "resolute", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/61ecb96da05b11c32a556adae7ccef48a56ad32f975fb7617d92a7dfa70ac1f9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" }, { "r": "4.5.3", "os": "mac", "version": "1.7.0", "date": "2026-10-27T10:07:47.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/db541e0a96f821e9e43b56d4e5130e39c7333ff4131a160a4e17e4e0536c5cc3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" }, { "r": "4.6.1", "os": "mac", "version": "1.7.0", "date": "2026-10-27T10:07:42.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/bf81b4d3d8e8287f97b519ac2b0d63eab977c00cdb460de4eb161f3ba306e155", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" }, { "r": "4.6.0", "os": "wasm", "version": "1.7.0", "date": "2026-10-27T10:07:55.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/5c38bba047584fe5ad6e33782f381c457d495a490cb313963656b50f1e7d21d6", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" }, { "r": "4.7.0", "os": "win", "version": "1.7.0", "date": "2026-10-27T10:06:51.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/95f672988c109205cd8f4818c9e5b13b7abdf217f9878c3d68a1ceb5dd24876b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" }, { "r": "4.5.3", "os": "win", "version": "1.7.0", "date": "2026-10-27T10:06:51.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/235d317de9356a2a19cf67c31efc767bc4f858beabd1e4e24937f0e5af8ca9ae", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" }, { "r": "4.6.1", "os": "win", "version": "1.7.0", "date": "2026-10-27T10:06:56.000Z", "commit": "05a28e94a810a23e17e6a89f572e9beffaee9637", "fileid": "https://r2.ropensci.org/f7520f3b4a67538fad5c0d3a6492861214026acb1a31f1b42cae735ee11858ab", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/40485377138" } ] }