{ "_id": "6a1ed4afb401979e7340e2bc", "Package": "COTAN", "Type": "Package", "Title": "COexpression Tables ANalysis", "Version": "2.13.1", "Authors@R": "c(\nperson(\"Galfrè\", \"Silvia Giulia\",email = \"silvia.galfre@di.unipi.it\", role=c(\"aut\",\"cre\"),comment = c(ORCID = \"0000-0002-2770-0344\")),\nperson(\"Morandin\",\"Francesco\", email = \"francesco.morandin@unipr.it\", role = \"aut\",comment = c(ORCID = \"0000-0002-2022-2300\")),\nperson(\"Fantozzi\", \"Marco\", email = \"marco.fantozzi@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-0708-5495\")),\nperson(\"Pietrosanto\",\"Marco\", role = \"aut\",comment = c(ORCID = \"0000-0001-5129-6065\")),\nperson(\"Puttini\",\"Daniel\", role = \"aut\", comment = c(ORCID = \"0009-0006-8401-9949\")),\nperson(\"Priami\",\"Corrado\", role = \"aut\", comment = c(ORCID = \"0000-0002-3261-6235\")),\nperson(\"Cremisi\",\"Federico\", role = \"aut\",comment = c(ORCID = \"0000-0003-4925-2703\")),\nperson(\"Helmer-Citterich\",\"Manuela\", role = \"aut\",comment = c(ORCID = \"0000-0001-9530-7504\"))\n)", "Description": "Statistical and computational method to analyze the\nco-expression of gene pairs at single cell level. It provides\nthe foundation for single-cell gene interactome analysis. The\nbasic idea is studying the zero UMI counts' distribution\ninstead of focusing on positive counts; this is done with a\ngeneralized contingency tables framework. COTAN can effectively\nassess the correlated or anti-correlated expression of gene\npairs. It provides a numerical index related to the correlation\nand an approximate p-value for the associated independence\ntest. COTAN can also evaluate whether single genes are\ndifferentially expressed, scoring them with a newly defined\nglobal differentiation index. Moreover, this approach provides\nways to plot and cluster genes according to their co-expression\npattern with other genes, effectively helping the study of gene\ninteractions and becoming a new tool to identify cell-identity\nmarker genes.", "URL": "https://github.com/seriph78/COTAN", "BugReports": "https://github.com/seriph78/COTAN/issues", "License": "GPL-3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "Config/testthat/edition": "3", "Language": "en-US", "biocViews": "SystemsBiology, Transcriptomics, GeneExpression, SingleCell,\nDifferentialExpression, Clustering, GPU", "VignetteBuilder": "knitr", "LazyData": "false", "Config/roxygen2/version": "8.0.0", "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libpng-dev\nlibuv1-dev libxml2-dev libssl-dev perl python3 libx11-dev\nzlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-05-20 13:05:30 UTC", "RemoteUrl": "https://github.com/bioc/COTAN", "RemoteRef": "HEAD", "RemoteSha": 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"AGCAAGCTCTCATT.1", "AGCACTGAGACGAG.1", "AGCATCGATTAGGC.1", "AGCATGACCACACA.1", "AGCATTCTCGAGTT.1", "AGCCACCTAGTGTC.1", "AGCCGGACACTTTC.1", "AGCCGGTGTGCTAG.1", "AGCCTCTGGTCTTT.1", "AGCGATACCTACCC.1", "AGCGATTGAAAGTG.1", "AGCGATTGTTGGCA.1", "AGCGGCTGCGATAC.1", "AGCGGCTGGGAAGC.1", "AGCTCGCTTTTCGT.1", "AGCTGAACCTTCCG.1", "AGCTTTACCCTATT.1", "AGGAAATGTCCAAG.1", "AGGACACTCTTGTT.1", "AGGACACTTTTGCT.1", "AGGACTTGGTTCTT.1", "AGGAGTCTGCGTAT.1", "AGGCAGGACTATGG.1", "AGGCCTCTGCCCTT.1", "AGGCCTCTTGAACC.1", "AGGCTAACAGATCC.1", "AGGGACGATCTTTG.1", "AGGGCCTGCAAGCT.1", "AGGGTTTGCGTTAG.1", "AGGGTTTGGAGGTG.1", "AGGGTTTGTAGTCG.1", "AGGTACACCTTGAG.1", "AGGTGGGACATTTC.1", "AGGTGGGAGTAAAG.1", "AGGTGTTGCATTCT.1", "AGGTTCGACTTCTA.1", "AGGTTGTGAGAGGC.1", "AGTAAGGAACCGAT.1", "AGTAAGGAAGTCTG.1", "AGTAAGGAGCGTAT.1", "AGTAATTGTTTCAC.1", "AGTACGTGACCGAT.1", "AGTACGTGGGTCTA.1", "AGTACTCTTTAGGC.1", "AGTAGAGATTAGGC.1", "AGTATAACGAATCC.1", "AGTATAACTCCGTC.1", "AGTATCCTTCTATC.1", "AGTCGCCTTAGCCA.1", "AGTCTACTCATTCT.1", "AGTCTTACACCACA.1", "AGTGAAGAGGTACT.1", "AGTGTGACACCTAG.1", "AGTTAAACGACTAC.1", "AGTTGTCTAGAACA.1", "AGTTGTCTAGAGAT.1", "AGTTTCACACAGCT.1", "AGTTTGCTCATGCA.1", "AGTTTGCTCTAAGC.1", "AGTTTGCTCTACGA.1", "ATAACATGCTAGTG.1", "ATAAGTTGTTCGGA.1", "ATAATCGAGGACAG.1", "ATACCGGACTAGTG.1", "ATACCGGAGAACTC.1", "ATACTCTGCCAAGT.1", "ATACTCTGCTTTAC.1", "ATAGAACTGTCGTA.1", "ATAGATTGGTGTAC.1", "ATAGCCGAATTCTC.1", "ATAGCCGAGCCCTT.1", "ATAGCTCTACGCTA.1", "ATAGGAGACCTTAT.1", "ATAGGCTGTCTTCA.1", "ATAGTTGACCCTAC.1", "ATATGAACTTTCAC.1", "ATCAAATGTCCCAC.1", "ATCAACCTTGGATC.1", "ATCAGGTGCGGAGA.1", "ATCATCTGCCTTCG.1", "ATCATGCTTACGAC.1", "ATCCAGGAACAGCT.1", "ATCCCGTGCCAACA.1", "ATCCCGTGGCCATA.1", "ATCGAGTGAGGTTC.1", "ATCGCGCTAACCTG.1", "ATCGGAACGCAGAG.1", "ATCGGAACTTACCT.1", "ATCGGTGATGCGTA.1", "ATCGTTTGGTTGCA.1", "ATCGTTTGTTGAGC.1", "ATCTACTGCCTCGT.1", "ATCTGACTAGAGAT.1", "ATCTTGACTCTTCA.1", "ATGACGTGATGGTC.1", "ATGAGAGAGCATCA.1", "ATGAGCACTCGCAA.1", "ATGATAACAAGGCG.1", "ATGCAGACCGAGAG.1", "ATGCAGACTTGTCT.1", "ATGCCGCTATCAGC.1", "ATGCCGCTGCGAGA.1", "ATGCGATGCTTCCG.1", "ATGCGCCTATTCTC.1", "ATGCTTTGCTACGA.1", "ATGTACCTTGAGCT.1", "ATGTCACTTTCAGG.1", "ATGTTGCTGTAGGG.1", "ATTAACGATCGCCT.1", "ATTAAGACTCGTTT.1", "ATTACCTGACGTTG.1", "ATTAGTGAACGTTG.1", "ATTCAAGAAGAGAT.1", "ATTCAGCTGCTAAC.1", "ATTCAGCTGTTCAG.1", "ATTCGGGAGCAGAG.1", "ATTGATGAGAGATA.1", "ATTGCACTGTAAGA.1", "ATTGCACTGTCTTT.1", "ATTGCTTGTGCAGT.1", "ATTTAGGAAGGGTG.1", "CAAAGCACGCTTCC.1", "CAAATTGACGAGTT.1", "CAACGTGACCAATG.1", "CAACGTGAGAGACG.1", "CAAGAAGACGAGAG.1", "CAAGACACCTACGA.1", "CAAGACACTCGACA.1", "CAAGCATGCATTCT.1", "CAAGCATGTTGTCT.1", "CAAGCTGAATCGTG.1", "CAAGCTGAGCTTCC.1", "CAAGCTGAGTAAAG.1", "CAAGGACTGGGATG.1", "CAAGGACTTGGAAA.1", "CAAGGTTGGGAACG.1", "CAAGTTCTACTTTC.1", "CAAGTTCTGTTACG.1", "CAATAATGGACTAC.1", "CAATATGAGAACTC.1", "CAATCTACGGATCT.1", "CAATCTACGTCCTC.1", "CAATTCTGCATTCT.1", "CACAACGAGCGAAG.1", "CACAATCTGCAAGG.1", "CACAATCTTGCGTA.1", "CACACCTGGACAAA.1", "CACACCTGTTCAGG.1", "CACAGAACCGATAC.1", "CACAGCCTGACGGA.1", "CACAGCCTTGCGTA.1", "CACCCATGTGTTTC.1", "CACCGTACAGATGA.1", "CACCGTTGAAACGA.1", "CACCGTTGCAGTCA.1", "CACGAAACTTTCGT.1", "CACGCTACCGGGAA.1", "CACGGGTGGACGAG.1", "CACTCTCTAGAGGC.1", "CACTGCACCGGAGA.1", "CACTGCTGTGACTG.1", "CAGACAACACTCTT.1", "CAGACATGTGGTGT.1", "CAGACCCTCTACCC.1", "CAGACTGAACACCA.1", "CAGAGGGATCCAGA.1", "CAGATCGAAAAGCA.1", "CAGATCGAACTCTT.1", "CAGCCTACGAGGTG.1", "CAGCCTACTTTACC.1", "CAGCCTTGAGGAGC.1", "CAGCGTCTTTCACT.1", "CAGCTCACTTATCC.1", "CAGGTAACGCGAAG.1", "CAGGTAACTACTCT.1", "CATAAAACCTGAAC.1", "CATAAATGCATGAC.1", "CATAACCTCCTTGC.1", "CATAACCTGCAAGG.1", "CATAACCTGCTGTA.1", "CATACTACGAAACA.1", "CATAGTCTACCCTC.1", "CATAGTCTAGCCAT.1", "CATAGTCTGTACGT.1", "CATCAGGAACCTTT.1", "CATCTCCTTCCCAC.1", "CATCTCCTTGACCA.1", "CATCTTGACTGTAG.1", "CATGCCACAGCCTA.1", "CATGCGCTCTAGCA.1", "CATGCGCTGCTACA.1", "CATGTTACCCGATA.1", "CATGTTACGCGTAT.1", "CATGTTTGCTTGTT.1", "CATTACACACCCAA.1", "CATTACACACTTTC.1", "CATTGGGATGGATC.1", "CATTGTTGCTAGAC.1", "CATTTCGACTTAGG.1", "CATTTCGATCGACA.1", "CATTTGACGGTCTA.1", "CATTTGTGTGAAGA.1", "CATTTGTGTTGGCA.1", "CCAAAGTGCCTCAC.1", "CCAAAGTGCTGAAC.1", "CCAACCTGAGGTCT.1", "CCAACCTGGTAGGG.1", "CCAAGAACCAACTG.1", "CCAAGATGCATTGG.1", "CCAATGGAGGACGA.1", "CCACCATGACTTTC.1", "CCACCTGAGACGTT.1", "CCACCTGATGGTCA.1", "CCACGGGACCCTCA.1", "CCACGGGACTTTAC.1", "CCACGGGATAGAAG.1", "CCACGGGATAGAGA.1", "CCACGGGATTCGGA.1", "CCACTGACTAGTCG.1", "CCACTGTGCGTAAC.1", "CCACTTCTTATTCC.1", "CCAGAAACTCTCAT.1", "CCAGACCTCACACA.1", "CCAGATGATGGTAC.1", "CCAGGTCTCTGTAG.1", "CCAGGTCTTCCCGT.1", "CCAGTCACTTCGCC.1", "CCAGTCTGTGGATC.1", "CCATAGGAACAGTC.1", "CCATGCTGATGTCG.1", "CCATGCTGTTCGGA.1", "CCATTAACCGTCTC.1", "CCATTAACGTCCTC.1", "CCCAACACATCTTC.1", "CCCAACACTAGTCG.1", "CCCAGACTGCTTAG.1", "CCCAGACTTTGCTT.1", "CCCATCGACGCATA.1", "CCCATGTGAAAAGC.1", "CCCATGTGCGGAGA.1", "CCCATGTGTGCTCC.1", "CCCTACGAGAGGCA.1", "CCCTGATGGTTACG.1", "CCGGAGTGGCTTAG.1", "CCTAAACTGCTAAC.1", "CCTAAGGAAGGTCT.1", "CCTAAGGACGAATC.1", "CCTAAGGAGTCCTC.1", "CCTATTGAACTCAG.1", "CCTATTGAAGCCAT.1", "CCTATTGATGCTCC.1", "CCTCATCTACGGAG.1", "CCTCGAACGTGCAT.1", "CCTCGAACTCTTAC.1", "CCTCTACTCAGTTG.1", "CCTCTACTGAACTC.1", "CCTCTACTGTTCTT.1", "CCTCTACTTTGCGA.1", "CCTGACTGCTTCCG.1", "CCTGACTGTTACTC.1", "CCTGGACTTTCGTT.1", "CCTTCACTCAATCG.1", "CCTTCACTTATGCG.1", "CGAAGGGAAGACTC.1", "CGAAGTACGGTTAC.1", "CGAATCGAAGTCGT.1", "CGAATCGATGCTCC.1", "CGACAAACTGGAAA.1", "CGACCGGAGCCATA.1", "CGACCTTGGTGTTG.1", "CGACGTCTTCACCC.1", "CGACTCTGAAGTGA.1", "CGACTCTGCACTAG.1", "CGAGATTGTTTCGT.1", "CGAGGCACATCTTC.1", "CGAGGCTGAAGTGA.1", "CGAGTATGTCCTGC.1", "CGATCAGAATGGTC.1", "CGCAAATGAGAGTA.1", "CGCAACCTTGGAGG.1", "CGCACGGAAGATGA.1", "CGCACGGACAGAGG.1", "CGCACGGACTCTAT.1", "CGCACTTGGTCACA.1", "CGCAGGTGCAATCG.1", "CGCAGGTGTTCAGG.1", "CGCATAGAAGCTAC.1", "CGCCATACAAGTAG.1", "CGCCTAACGAGGTG.1", "CGCCTAACTAGCCA.1", "CGCGAGACCCTACC.1", "CGCGAGACTATCTC.1", "CGCGAGACTCTTTG.1", "CGCGATCTTGAAGA.1", "CGCTAAGATGTAGC.1", "CGGACCGATGCTTT.1", "CGGAGGCTGGATTC.1", "CGGAGGCTTTTGGG.1", "CGGCATCTTCCGTC.1", "CGGCCAGATAGCGT.1", "CGGCGATGCCCTTG.1", "CGGCGATGGCAGAG.1", "CGGCGATGGGTTCA.1", "CGGGACTGTCTTAC.1", "CGGGCATGGATAAG.1", "CGGGCATGGGAGGT.1", "CGGTCACTTACTGG.1", "CGTAACGATTCACT.1", "CGTACAGAAAGAGT.1", "CGTACAGACTCGAA.1", "CGTACCTGAGAATG.1", "CGTACCTGATCAGC.1", "CGTCAAGACGTTGA.1", "CGTCAAGACTGATG.1", "CGTCAAGAGCAAGG.1", "CGTCCAACGTTGTG.1", "CGTGCACTCAGATC.1", "CGTGTAGACACTGA.1", "CGTTAACTGGTGTT.1", "CGTTAGGAGAAACA.1", "CGTTAGGATTACTC.1", "CTAAACCTTTTCTG.1", "CTAACGGACTTCTA.1", "CTAAGGACTAACGC.1", "CTAAGGACTCAGTG.1", "CTAATAGACCTCAC.1", "CTAATAGAGCGAAG.1", "CTAATGCTACAGCT.1", "CTAATGCTCTTACT.1", "CTACCTCTAGCCAT.1", "CTACGCACTTCAGG.1", "CTACGGCTCCAGTA.1", "CTACTCCTGTGCTA.1", "CTAGATCTAGCGTT.1", "CTAGATCTGTAAGA.1", "CTAGTTTGGATAGA.1", "CTATACTGCTTGGA.1", "CTATAGCTACCTCC.1", "CTATAGCTTCCTAT.1", "CTATCAACGAGGAC.1", "CTATCATGACTGGT.1", "CTATCATGGCTGTA.1", "CTATGTACATGTGC.1", "CTATGTACCTCGAA.1", "CTATGTTGTCTTTG.1", "CTATTGACAGATGA.1", "CTATTGACGGTAAA.1", "CTATTGTGCTAAGC.1", "CTCAATTGCTTACT.1", "CTCAGAGAAGCCAT.1", "CTCAGAGATGTGCA.1", "CTCAGCACGAAAGT.1", "CTCAGCACGTGTTG.1", "CTCCGAACAGCGTT.1", "CTCGAAGATCGTGA.1", "CTCGACACAAGAGT.1", "CTCGAGCTGCTACA.1", "CTCTAAACGCGTTA.1", "CTCTAAACGTCACA.1", "CTCTAATGAGATCC.1", "CTGAAGACTCACCC.1", "CTGAAGACTTCTTG.1", "CTGAAGTGGTCGTA.1", "CTGACAGACCATAG.1", "CTGACAGACCGTAA.1", "CTGACCACTCTAGG.1", "CTGAGCCTGTTCTT.1", "CTGCAGCTTTACCT.1", "CTGCGACTAGCCTA.1", "CTGTATACGTGAGG.1", "CTGTGAGACCCTTG.1", "CTGTGAGATTCCCG.1", "CTTAAAGATCTAGG.1", "CTTACAACGGAGTG.1", "CTTACAACTTGCTT.1", "CTTACATGCCCTAC.1", "CTTACTGATGTCTT.1", "CTTAGACTGTCAAC.1", "CTTCACCTTCGCTC.1", "CTTGAACTCAGATC.1", "CTTGAACTCCACCT.1", "CTTGTATGATCTTC.1", "CTTTACGAGACAAA.1", "CTTTAGACCCTACC.1", "CTTTAGACTGTGAC.1", "CTTTAGTGGATAGA.1", "GAAACCTGTGCACA.1", "GAAAGCCTACACAC.1", "GAAAGTGAAAGTAG.1", "GAAATACTCTCATT.1", "GAACCTGATACGCA.1", "GAACGGGAAGAATG.1", "GAACGGGACACTCC.1", "GAAGAATGAGCTAC.1", "GAAGAATGGGTCAT.1", "GAAGCGGAAATGCC.1", "GAAGTCACGGTGAG.1", "GAATGGCTAAACAG.1", "GAATTAACTTCACT.1", "GACAACTGCTGTAG.1", "GACACTGACTGCAA.1", "GACACTGAGTAGCT.1", "GACAGTTGACCTGA.1", "GACATTCTACAGCT.1", "GACATTCTACGGGA.1", "GACATTCTACTCTT.1", "GACCTAGACTCCAC.1", "GACCTCTGTTGCGA.1", "GACGAACTCCTGAA.1", "GACGAACTCGTGTA.1", "GACGAACTGTTAGC.1", "GACGAGGAAAGAGT.1", "GACGAGGACCTATT.1", "GACGAGGATGGTTG.1", "GACGCTCTAATGCC.1", "GACGGCACGGTACT.1", "GACGTAACGTTCGA.1", "GACGTAACTAAGGA.1", "GACGTCCTCAGAGG.1", "GACTGTGAACTTTC.1", "GACTTTACTTTACC.1", "GAGAAATGCCTATT.1", "GAGATAGAACACCA.1", "GAGATAGAGCTAAC.1", "GAGCTCCTGGTAAA.1", "GAGGCAGAAACCTG.1", "GAGGGAACAAAGTG.1", "GAGGTACTCGGGAA.1", "GAGGTACTTGCTAG.1", "GAGGTTACCAGATC.1", "GAGTAAGACAGTCA.1", "GAGTACACTGACCA.1", "GAGTACTGCACAAC.1", "GAGTCAACGCTTCC.1", "GAGTGACTGGAGTG.1", "GAGTGTTGGGTCTA.1", "GATAAGGAACCAGT.1", "GATAAGGACTCAGA.1", "GATACTCTACACTG.1", "GATAGCACACCATG.1", "GATATAACCGTTGA.1", "GATATATGACGACT.1", "GATATCCTGGAGGT.1", "GATATTGACAGTTG.1", "GATCATCTATCACG.1", "GATCGATGACGTAC.1", "GATCTTACCGTTAG.1", "GATCTTACTATGCG.1", "GATGCATGAACGTC.1", "GATGCATGCGAGTT.1", "GATGCATGCTCGAA.1", "GATGCCCTCATTGG.1", "GATTACCTACACTG.1", "GATTACCTGTTGTG.1", "GATTCTACCCATGA.1", "GATTTGCTCAAGCT.1", "GCAATCGAGTAGCT.1", "GCAATCGATAAGGA.1", "GCACAAACATAAGG.1", "GCACAAACCACTGA.1", "GCACAAACGATACC.1", "GCACAATGCGACAT.1", "GCACCTACATCTCT.1", "GCACCTACGGAGTG.1", "GCACCTTGCCCACT.1", "GCACGGACATCTCT.1", "GCACGTCTAAAACG.1", "GCACTAGAGGTACT.1", "GCACTGCTACGTAC.1", "GCAGCCGACTAAGC.1", "GCAGCGTGAGTCGT.1", "GCAGGGCTGGACTT.1", "GCAGTTGAGCTAAC.1", "GCAGTTGAGGTGGA.1", "GCATCAGATCTCGC.1", "GCCAAAACCCTTGC.1", "GCCAAATGAGTGCT.1", "GCCAAATGGACTAC.1", "GCCACTACTTTGCT.1", "GCCTAGCTATGTCG.1", "GCCTCATGCTCTTA.1", "GCCTCATGGAGAGC.1", "GCGAGCACTGCTCC.1", "GCGCGATGATGCTG.1", "GCGCGATGCGGGAA.1", "GCGGACTGGAAAGT.1", "GCGGACTGTGTCAG.1", "GCGGCAACTGGATC.1", "GCGGGACTAGTACC.1", "GCGTACCTCCGTAA.1", "GCGTACCTTGCTAG.1", "GCTACCTGAGCTCA.1", "GCTACCTGCTGTAG.1", "GCTAGATGATGTGC.1", "GCTAGATGGCCATA.1", "GCTATACTAAAGCA.1", "GCTATACTAGCGTT.1", "GCTATACTAGTGTC.1", "GCTCAAGACTGATG.1", "GCTCGACTCCCACT.1", "GCTTAACTTCTATC.1", "GCTTGAGAACCCAA.1", "GCTTGAGAGCTGAT.1", "GGAACACTCCATGA.1", "GGAACTACTCGTAG.1", "GGAAGGTGGTATCG.1", "GGAAGGTGTGAAGA.1", "GGAATCTGGAACCT.1", "GGAATGCTCTTATC.1", "GGACAACTACGTAC.1", "GGACAACTCTAGTG.1", "GGACAACTGGTTAC.1", "GGACAGGAGTGCTA.1", "GGACATTGATGCCA.1", "GGACCTCTGGTAGG.1", "GGACGAGATGCTCC.1", "GGACGCACCGCATA.1", "GGACGCTGAACCGT.1", "GGACGCTGACCTCC.1", "GGAGCAGATGTCAG.1", "GGAGCGCTGATAGA.1", "GGAGGATGCATACG.1", "GGAGGCCTAAGTGA.1", "GGAGGCCTCTTGTT.1", "GGAGTTACAGTACC.1", "GGAGTTACAGTAGA.1", "GGAGTTTGTACGAC.1", "GGATTTCTGGGATG.1", "GGCAAGGAGGAGGT.1", "GGCACGTGGGAGCA.1", "GGCATATGAGACTC.1", "GGCATATGGACACT.1", "GGCATATGTCAGAC.1", "GGCCAGACTTTACC.1", "GGCCGAACCTGGTA.1", "GGCGACACAATCGC.1", "GGCGACACGAATGA.1", "GGCGCATGACGTTG.1", "GGCGCATGCACTAG.1", "GGCGCATGCATCAG.1", "GGCGGACTATCGAC.1", "GGCGGACTGAGATA.1", "GGCTAATGTGGAGG.1", "GGCTACCTATCTTC.1", "GGCTCACTATGCCA.1", "GGGAACGATGACAC.1", "GGGACCTGTCACCC.1", "GGGACCTGTTCACT.1", "GGGATGGATAGAGA.1", "GGGCAAGATGATGC.1", "GGGCACACAACAGA.1", "GGGCACACGGTACT.1", "GGGCACACTATCTC.1", "GGGCAGCTGACTAC.1", "GGGCCAACAAACAG.1", "GGGCCAACAAGAAC.1", "GGGTTATGGTGCAT.1", "GGGTTATGTGAGCT.1", "GGGTTATGTTCTTG.1", "GGTAAAGAAGCAAA.1", "GGTAAAGAATCGGT.1", "GGTAAAGACGTAAC.1", "GGTACTGACCTCGT.1", "GGTACTGAGTAGCT.1", "GGTACTGATCATTC.1", "GGTAGTACCTTAGG.1", "GGTATCGAGCTGAT.1", "GGTCTAGACCGATA.1", "GGTGGAGATATCTC.1", "GGTTGAACGTCGAT.1", "GTAAGCACACCTAG.1", "GTACCCTGCCTCCA.1", "GTACCCTGGTACCA.1", "GTACCCTGTCTTAC.1", "GTACGAACCCCACT.1", "GTACGTGAGAACTC.1", "GTACTACTACCATG.1", "GTACTACTGTCTAG.1", "GTAGACTGTCGTAG.1", "GTAGGTACAGTGTC.1", "GTAGTCGAACGTGT.1", "GTAGTCGACGTTGA.1", "GTAGTCGATCGTAG.1", "GTAGTGACCGTGTA.1", "GTATCTACCTTGAG.1", "GTATGGTGCTATTC.1", "GTATGGTGTGGTTG.1", "GTCAACGAATCAGC.1", "GTCAACGATCAGGT.1", "GTCACAGATGCTTT.1", "GTCATACTAAACAG.1", "GTCATACTTCGTAG.1", "GTCCAAGAGTGAGG.1", "GTCCACACCTGTAG.1", "GTCTGAGAATCAGC.1", "GTGAACACTAGAGA.1", "GTGACCCTACGCAT.1", "GTGAGGGAAGATCC.1", "GTGATCGAGTTGTG.1", "GTGGAGGATAGAAG.1", "GTGGATTGTCAGAC.1", "GTGGTAACCGGAGA.1", "GTGTATCTTCTATC.1", "GTTAAAACCCTAAG.1", "GTTAAATGCTGTTT.1", "GTTAAATGGTTAGC.1", "GTTAGTCTGTCTTT.1", "GTTATAGAAAACGA.1", "GTTATCTGTTCCCG.1", "GTTATGCTAGCCTA.1", "GTTCAGGATCCGAA.1", "GTTGAGTGGAGACG.1", "GTTGGATGCTCTAT.1", "GTTTAAGAAGCACT.1", "TAAACAACTTCCGC.1", "TAAATGTGTGTAGC.1", "TAACAATGGTCCTC.1", "TAACATGAGCAAGG.1", "TAACCGGACGGAGA.1", "TAAGATACGTGTTG.1", "TAAGATACTCGCAA.1", "TAAGCGTGAGCTAC.1", "TAAGCTCTAAGTAG.1", "TAAGGGCTAATGCC.1", "TAATCCACGCATCA.1", "TACAAATGCGAATC.1", "TACATAGACCTGTC.1", "TACATAGACTGCTC.1", "TACATCACGACTAC.1", "TACATCACTCGTAG.1", "TACATCACTTCCAT.1", "TACCGAGACCTTGC.1", "TACGACGACCAGTA.1", "TACGAGTGGGTTCA.1", "TACGATCTAGAAGT.1", "TACGATCTATGGTC.1", "TACGCAGAGGGAGT.1", "TACGGCCTTACTTC.1", "TACGTACTAGAAGT.1", "TACGTACTGGTGGA.1", "TACGTTACAATCGC.1", "TACTAAGATGCCTC.1", "TACTACACCTTACT.1", "TACTACACGAGCAG.1", "TACTACTGTGCAAC.1", "TACTCAACGTTTGG.1", "TACTCCCTACCAGT.1", "TACTCTGATTTGCT.1", "TACTGGGATGTTTC.1", "TACTGTTGAGTAGA.1", "TACTGTTGCCGAAT.1", "TACTTTCTATGCCA.1", "TACTTTCTCGTAGT.1", "TACTTTCTGACAAA.1", "TACTTTCTGATAGA.1", "TAGAAACTTTTCTG.1", "TAGAATTGGACACT.1", "TAGACGTGCATACG.1", "TAGAGCACCCGTTC.1", "TAGAGCACGCAGTT.1", "TAGAGCACGTAGCT.1", "TAGATCCTGGTGAG.1", "TAGCCCTGAGTCTG.1", "TAGCCGCTGGTTCA.1", "TAGCTACTCTGTCC.1", "TAGGACTGGAATAG.1", "TAGGCAACCTGCTC.1", "TAGGCAACGAGGAC.1", "TAGGCATGATCGGT.1", "TAGGCATGCTTATC.1", "TAGGCTGAAAAACG.1", "TAGGGACTCTGCAA.1", "TAGGTTCTCTCGCT.1", "TAGTAATGGCTACA.1", "TAGTACCTTCTATC.1", "TAGTATGATCTTCA.1", "TAGTGGTGATTCCT.1", "TAGTTAGAGCCTTC.1", "TAGTTAGATTCTAC.1", "TAGTTGCTAAGCAA.1", "TATAAGTGCCATAG.1", "TATACAGAAACAGA.1", "TATAGCCTAACCTG.1", "TATCAAGACTCATT.1", "TATCAGCTCGTGTA.1", "TATCAGCTGGTGTT.1", "TATCGTACGGTGGA.1", "TATCTGACTGCGTA.1", "TATGGGTGCAGATC.1", "TATGGGTGGGCGAA.1", "TATGGGTGTGGCAT.1", "TATGTCTGTGCTCC.1", "TATTTCCTCGTTAG.1", "TATTTCCTCTAGAC.1", "TCAACACTTAGCGT.1", "TCAACACTTCAGAC.1", "TCAATAGATCTGGA.1", "TCACCCGATCTGGA.1", "TCACCGTGGTTTGG.1", "TCACCTCTCAATCG.1", "TCACCTCTGGGTGA.1", "TCACGAGATAGACC.1", "TCACTATGTAGCCA.1", "TCAGCAGACATTTC.1", "TCAGCAGATTGCAG.1", "TCAGCGCTCTCCCA.1", "TCAGCGCTTTGACG.1", "TCAGTTACGGTAGG.1", "TCAGTTACTACTGG.1", "TCATTCGATCTCAT.1", "TCCACGTGTGACTG.1", "TCCAGAGATTCTTG.1", "TCCCACGAAACAGA.1", "TCCCATCTCAGATC.1", "TCCCGAACATTGGC.1", "TCCCTACTCTGTAG.1", "TCCGAAGACTACGA.1", "TCCGGACTCTGCAA.1", "TCCGGACTGGAGCA.1", "TCCGGACTTCCTCG.1", "TCCTAAACCTGTAG.1", "TCCTAAACTCAAGC.1", "TCCTAATGGCATCA.1", "TCCTATGATTCCCG.1", "TCGAATCTAAGGGC.1", "TCGAATCTTGTGAC.1", "TCGACCTGTCCGAA.1", "TCGCCATGCCACCT.1", "TCGGACCTTTCGGA.1", "TCGGCACTTATCTC.1", "TCGTAGGAGGGAGT.1", "TCTAGTTGCAGTTG.1", "TCTCCACTCCGTTC.1", "TCTCTAGATCCGAA.1", "TCTTACGATCTCTA.1", "TCTTACGATGAAGA.1", "TGAAGCACGCGGAA.1", "TGAAGCACTCCCGT.1", "TGAAGCTGAGCACT.1", "TGAAGCTGCCTATT.1", "TGACCAGACACACA.1", "TGACGAACCCCACT.1", "TGACTTTGTGCAGT.1", "TGAGACACGATACC.1", "TGAGCTGAAGACTC.1", "TGAGCTGACCTCAC.1", "TGAGGACTCGATAC.1", "TGAGGTACGTTGTG.1", "TGATAAACATGCTG.1", "TGATACCTACCTCC.1", "TGATACCTCTTCCG.1", "TGATACCTTTTGGG.1", "TGATCACTGCCCTT.1", "TGATCGGAAGCACT.1", "TGATTAGATAGAAG.1", "TGATTCACGGAACG.1", "TGATTCTGTGAGAA.1", "TGCAGATGCGGAGA.1", "TGCAGATGGCGAAG.1", "TGCAGATGTGTTTC.1", "TGCCACTGTGCTTT.1", "TGCCAGCTCTTGTT.1", "TGCCAGCTTGCACA.1", "TGCCCAACCAGAAA.1", "TGCCCAACCCCGTT.1", "TGCCCAACTTTGTC.1", "TGCCGACTACTGGT.1", "TGCCGACTCTCTTA.1", "TGCCGACTGTACGT.1", "TGCGTAGAAAACAG.1", "TGCTATACCTCAGA.1", "TGCTTAACAATGCC.1", "TGCTTAACAGGAGC.1", "TGCTTAACATCACG.1", "TGCTTAACCCTCCA.1", "TGGAACACTCGTGA.1", "TGGAACTGAGAAGT.1", "TGGAACTGTGCTAG.1", "TGGAGGGACAGGAG.1", "TGGAGGGATGAGCT.1", "TGGATCGAACCCAA.1", "TGGATGACAGAAGT.1", "TGGATGTGTCGTTT.1", "TGGTAGTGTTGAGC.1", "TGGTATCTCCAACA.1", "TGTAAAACTTTGGG.1", "TGTACTTGTTCCAT.1", "TGTAGGTGTTTGCT.1", "TGTAGTCTCATGAC.1", "TGTATGCTTATTCC.1", "TGTGAGACGCTTAG.1", "TGTGAGTGAGAAGT.1", "TGTGAGTGTTCACT.1", "TGTGATCTTTGGTG.1", "TGTGGATGCTCGAA.1", "TGTGGATGGAGATA.1", "TGTGGATGTCCTCG.1", "TGTTACACCTGCTC.1", "TTACACACGAGGTG.1", "TTACACACTGGTCA.1", "TTACAGCTAAAGTG.1", "TTACAGCTGTGTTG.1", "TTACCATGAAGGTA.1", "TTACGTACTGGTTG.1", "TTACTCGATAGTCG.1", "TTACTCGATTCGGA.1", "TTAGACCTACCTGA.1", "TTAGCTACTTCGCC.1", "TTAGGTCTTACAGC.1", "TTAGTCACAACGGG.1", "TTATGAGAGGTCAT.1", "TTATGCACATCTTC.1", "TTATGGCTCAACTG.1", "TTATTCCTGACGGA.1", "TTCAAGCTTTCCAT.1", "TTCACCCTAGCCTA.1", "TTCACCCTATCGGT.1", "TTCAGTACTACTCT.1", "TTCAGTACTTACTC.1", "TTCCAAACGTAAAG.1", "TTCCATGACCTGAA.1", "TTCCATGAGCAAGG.1", "TTCCCACTCACTAG.1", "TTCCTAGACAAAGA.1", "TTCGAGGAGACGTT.1", "TTCGTATGCTATTC.1", "TTCTCAGATCGCCT.1", "TTCTTACTCGCAAT.1", "TTGACACTCCATAG.1", "TTGACACTTGAGGG.1", "TTGAGGTGTTTCAC.1", "TTGATCTGTGTCCC.1", "TTGATCTGTTGGCA.1", "TTGCATTGCGAGTT.1", "TTGCTAACAGAGGC.1", "TTGCTAACTGGTCA.1", "TTGCTATGGACAAA.1", "TTGCTATGTGGTTG.1", "TTGGGAACTAGAGA.1", "TTGGTACTCGGGAA.1", "TTGTCATGCAGATC.1", "TTGTCATGGTGTTG.1", "TTTAGCTGCTGGTA.1", "TTTATCCTTCAGAC.1", "TTTCACGAGTTCGA.1", "TTTCCAGAAGGTTC.1", "TTTCCAGATCAGAC.1", "TTTCTACTCCTGTC.1", "TTTCTACTGAACTC.1", "TTTGCATGACACTG.1" ], "rows": 92, "table": true, "tojson": true }, { "name": "raw.dataset", "title": "Data-sets", "object": "raw.dataset", "file": "raw.dataset.rda", "class": [ "data.frame" ], "fields": [ "CGTTTAGTTTAC", "TCTAGAACAACG", "ACCTTTGTTCGT", "TTGTCTTCTTCG", "TAAAATATCGCC", "GTACCCTATTTC", "GCACATTACCCA", "CCTCGCGCGGCT", "TTAATTTTGCCT", "GTCTTGCGTTTT", "TAGGCATATCTN", "CCCGCTCGTGGC", "AAACTTCATCTT", "CTTCTCTCACGA", "GAGAAAGGTTGA", "CAACGCTCCCGC", "CGAGATTTGCCT", "ATCACTACTAGG", "CGGTCGTTGGCG", "AATTTACCTCTT", "ACCGTGACTTCT", "GCACATTTAATT", "TCGACCCCTACG", "GCTTCCACGAGG", "CAGATTTGCTGT", "ACCATTCCGTCT", "AGTAAGTTGCTT", "CTCGGTTGTGGA", "CTACTGGAGAGA", "TTGTCCATCGAT", "TCAAGTGAACCT", "CAGGATTACTTT", "CTTCTTATTCCG", "CTTCCAATCCTA", "GCCTCTCTGTGN", "ATCCGGCGCTGT", "TATGTTGCTGAC", "TATACGGTTCGC", "GAGGTCAGTTCC", "GCCGTGCATGAT", "GGCTTCGCCAAA", "TTGCTCAGTTCN", "GCCCGCCCTTTT", "CAGCTATGATAA", "GCATTGAGGTTC", "ATTCGAGCTATT", "CGAAGCAGCTGG", "TTCCCGCATCGT", "CAGGAGACTACA", "TTATTCCCACAC", "TCAATCTTCCTT", "CCGATGATGTGT", "GCTAGGATTTTA", "ATGTTCATACCA", "AAGAGAGACGTT", "AGATCTTCTATT", "TGTATAGCTGTC", "AATTTGCCCCGC", "CCCGCTTCTGCG", "TCTTGGCGGCAN", "CCTTGTCAGTTA", "GCCATTAGTGAC", "CCTCCAAGCCAC", "TTGCTGTGCCAT", "CCCTCGACTTTA", "TGGCAGATGTAC", "TACATCCAGACT", "ATCAGAGGATGG", "CCCTGATGGCCC", "TGCCTTGCCCAT", "TGTTTGCTTGAG", "CCCTACCGCACT", "TCGTTTGAGTCN", "GCACGAAGTTGC", "CGACATCGTTTT", "GTGCATCTGATT", "AAGCCGCAGTCA", "TCGACACACCCC", "GATCCCGCTGTG", "CTCAGACCAGTC", "TTTGTTTTACTA", "CAAATTCTTGCT", "CCCTGGATCCAC", "GGCTCCTGCACA", "CTCACACACAAA", "GTGCGCAATCCG", "ACCTCCGGGCGT", "TTTGAATACCTN", "GTCATCCACGCC", "GAGATTTGTCCN", "CCAGGTTTTTCG", "ATGAGAGACTAC", "GCGGAGTGGACN", "GCTAAACATCCA", "GACCTTCAGTCC", "CCCGCACAGTTA", "ACGCGTCCGACC", "TGCTTCTCATGT", "TTAGTGACGTGG", "TGATGAGGCCCC", "CATCAACCGATT", "TGGATGCTTGGN", "ACGCAGACAGCN", "CCCGGATTAGCA", "GCAAGTGTCAGG", "TAGACGAGCTGT", "TACCATCAACCA", "CTGGTAGCGGCG", "GCTCACATTTGT", "ACCCGACTGGCG", "GACGCTTCTGCT", "CGTCCGGCCTGG", "TGACCATTGCTC", "ATCATCAACGAC", "GCGGACATTTCA", "CAGTTGCCAGAG", "GTTTTCATCCTT", "TGTGATGGAGCC", "CCTACTAACCCA", "CTCACCGCCGCA", "CTGGTTCGCTAA", "CCCTTTTGACTT", "AGTACTCCGGTT", "TTATCCCAACAT", "ATTCGGCGGTGT", "AGTCAGTGACCC", "AAGTGCAGTCGA", "CAGCTTCCATAT", "ACCTTTCAATCN", "GACGTTCTTTCG", "CAGAGACCCAGA", "CAATTAGAGAGT", "GTGCCAATCCCG", "CCGTCCTCTCAC", "GAAGGAACTTGN", "TCATTACGTACT", "TAAGCATAATAG", "TATGGGCATCTC", "CAGTATTACTGT", "CAAACGCCTCCG", "GCAGTCTGTTTA", "GGGTCTGACAAT", "CCATTCATACGT", "TAGCCTCTTGGT", "AATCTACCGTGT", "ATCGATCCCAGG", "TATTCTATGACN", "GAAACCCAGGTA", "CCATGGCCGATC", "TTCAGGTGGCTC", "CCCAGTGCCACC", "CACTCGCGGACC", "AGCCTCCTGATC", "CTTGTTTACACC", "CGACTACCAGTC", "CCAATATACAAG", "AACACCCCACCA", "GATTATAGGAGC", "AATTCCGAGGCT", "CGCTGGGTGACC", "TCTTGGCGTCGC", "ACAAATAGTTGA", "CCAGCGATGTCG", "GCGCGGAGTAGA", "TAGTCACGTTCN", "GAGCAGAGGACG", "AAGCCCGTGCCG", "TCATCGTCTTGT", "CCTACGTCGACT", "GGAGATCAGGCC", "CGTATACCATAA", "ATCCTCGGTCCG", "TAGTCCATTCGG", "CTGCCGCAAATA", "AGTCAGCTAGCN", "AGTCCGAATGAG", "CGATGAAGGGTC", "GCCGTCTAATCA", "GAGCTGCTGTTA", "CTGACGTAGCTC", "TTGTACTAAACT", "ACGTCCCCTTAC", "TGTATCCCCGCG", "AATACAGAGATA", "GAGCTTATCTGN", "GTTCCTTTCGAT", "GAAATAAGTCTG", "TCTATGTTTTTN", "CGCAGCCACGTC", "ACTTGCAAACAC", "ACCTGATATTAC", "GTCCAGTGCATT", "GCAGCCCAGGTG", "TGTTAACACATA", "TTGCCTGTTGAC", "AGCAGGTCCTTN", "CCGAATGACTAG", "CCAATCGAAGTT", "GTGGTAGGTCAC", "GAACATAACTAG", "GAGTGCAATTTG", "ATAGGTCCTCTG", "GGGACTGCAACN", "ACGTCGTATGTG", "AGAACGTACGAT", "AGCAAGCGAGTC", "CAGAGGTCAGAG", "TCCCTGTATTCG", "ACCCGTGGAGGC", "AGATCGTAACCC", "CCTTAGGGAACA", "TGGTATGAACCT", "AGAAAGTCAGGA", "GTCGCGCCATTC", "GGTTTTTCTCCA", "AAGCTTTTCAGT", "AGGCATCAGCAA", "TGCTGAAGCTGA", "AAAGTCCAACTA", "TTCAACTGCTAT", "CGCGCTCACTGG", "GGTGTACAGTCT", "AGTCCTAGTTTA", "CTTCCAGGCCCC", "TTTGCTGAGCAA", "TCTACGACTACC", "GCTGTGGACCTG", "TATAAGGCCTAN", "TCCTACTATCCA", "CGCCCTGACCAT", "ATACACCCATGC", "GGCAGGCGTGGG", "TTTCGTTCAGAA", "ATATGGAGCATA", "CCTTGCTTACCT", "ATGTTGTCTACA", "CGCGGCAGAATC", "AAAAATATATTG", "CGATTAGACTTC", "CTGACGTTCCCC", "GTTGTGAGCTAG", "ATGAATCCGTAT", "AGAGCGGTACCT", "CATTGGATTTCA", "TTGACACGCCAA", "ACGCAGGGCTTC", "AGTAGACCCCTT", "ACGCTATTCCCT", "CTTCGTTATTAG", "CGCGGCAGTGGA", "GAAAGTATTGTA", "ACTAATCCCCAG", "GCGGAGCTCGCT", "CGTCTATGATGC", "GTCCAGTTGAAG", "TTATTTTTTGTG", "TTTTCTACAGAA", "CTTCTAAACCCC", "ACCCCTGATGCC", "ACTGGTGCCCAC", "TTAATTGGACAN", "GTTCAACTGTCA", "ATCAACTTGGGT", "TGGCTACGGAAC", "CGTGCAGACTAA", "ACGTTCGGTTGN", "ATTGGATGAACC", "GTATACGATAAA", "TACGAACATGAC", "TAAAACCAACCG", "AGTGACCTGGAG", "TAGCTCGAGTTT", "ACGACAAGATTT", "GGAAGGCTACCT", "TGTGGAGCGCCC", "CCGCTAAGGCTN", "AATTTGGATTAT", "GGTATGCAATGN", "CCGTCTTGGCGT", "AGTATGCTTTGA", "TAACGTTCGCTC", "ACATTAGACCTC", "GCATGCTCCCTN", "GTTCTCGTCAGA", "TAGTCCCCGACA", "ACCGTAGAAAGT", "TCTTCTCTTCGC", "CCACAGTGCGCT", "GTCAGCCGTTTA", "TTTGTAGAGGCA", "GTCTATTGTTGG", "AGCCTAAGGTGA", "CCCCGTGTGCCC", "CGGGTGAGTCCA", "TGGTCACGGAAA", "GCTATGCCAGGN", "CGAAGAGACCAC", "GGTACTTAATTG", "ATTCAAGTAATN", "AACCGAGAAGTG", "ACGGTAGCTATT", "GGCCATAGCATC", "CTATTGATCAAA", "TGCCGTTCTTCG", "TGGTCTAGATCG", "TATCTACAAGCA", "AAGCGGTTAGGN", "CGGGTGGGGACA", "GCGAGGCACGGC", "CCCACCGCCCAG", "ATGTCACTACCC", "CCGCGTACCCAT", "CCAGGCAGGTCC", "GCTTAGATCATA", "TTGCGGGAAGTC", "GCCACTAGACGC", "GTAGTCGTCCAC", "CACCCTGTGCGC", "GCCGAGTAAGTC", "AGGCGTGAAGTG", "TAGGCAGCCACC", "GCGGCCGTGCTN", "GTCACTCCCGTT", "GACATTTGATGC", "CGGGGCAAACCC", "TGCTACGTCATA", "TTCGAACCACCC", "CTAGCCCAGCAG", "GACGGCACGTTN", "CCACGTAGGTTG", "TGAACGCGATGN", "ATCTTGCCGGAG", "GTAAGATTTGGT", "GACACGAGACTA", "TGCTCGGGGACA", "ATGTGCTATAAT", "AGATAAGTGCAG", "TACGGGAAACGT", "ATCTGAATTTTC", "AGCAAGCGTGAC", "AGTCGGGCCAGA", "CATTGCGCGACT", "TCTCAGTTTGAC", "GTATAACCTATA", "AGTCTGACATAT", "CCACTTTGGGAC", "GCCGGGTAAGAC", "AGCGAGAACCCG", "AACTGGCGTCGT", "AAATTGGGTCGC", "GCCAGGATGGCC", "TCGCCCTAATCG", "CATCGCTAGGAA", "GTATCCTTCCGC", "TTATCGTGTCTG", "TAGCCGTTTATC", "TCTTAGACCCCT", "GCGTGTTGAGAG", "TCGCACGGACCA", "CGCGCGGAGGGC", "CCAAACCTACTT", "AACCTAGTCATC", "TTCAGTACTTTA", "GAAACGACATCA", "AGTTTTTAGTGC", "CTTGATATCACT", "TTGAGTAGACTA", "TTGGTTGGCAAG", "TTCAGAATACAG", "GTAGCCCTCGGC", "CAGTAACTCTAG", "GTTGCACGTGAA", "TTACCTTTGCGC", "CTAGCCCTACGC", "TTGTGGGAACAN", "GTTCGCGCTTCG", "GTCTTTTCCTAC", "CGTATCTTGAAN", "GTTTGAGGCGTT", "GTCCAGCAGCTA", "CAGATTTAGTAA", "AGCAAGCGGTCN", "GTTCGTACCCCT", "AGGTGCCGCGAG", "CGACCGCGTGCA", "TCCGAAGTTGTA", "TATGCTGTGCGA", "ACTGGATGGATC", "GCGCCAGTTTTT", "CAGGTAAAATCC", "CAAAAACAGCAN", "CAGTTGAACGCG", "GATGAAACTTAT", "AGGCTTGTATAC", "AGGTTCGAAGTT", "TCAGGAAGACAT", "AACCGTGATCGA", "TTCCGGCTTCCN", "TAGAATCATAAG", "TACCACCCGTGT", "GGCTACATGGTA", "TCCCTTAGTCTG", "GGAGCCGGCTAG", "GGCATCGAGGGC", "CACATCAATGCG", "CATTAATAATGT", "CCAGATGCCGTG", "ACGTAAATTTAG", "CTCGATCAGTTC", "TTACTATTTCAG", "CGCTGTAGATAN", "AGCGGTGGAGGT", "AGCTACGACGTA", "TAGTTCGATTGG", "TATAGGCATTAC", "CCACGGGTCCAA", "GGCCGCATTTCT", "CGACCTGATTCT", "GCGGACTGGTTG", "TAGTTTCCAGTC", "TTTTAAACGGTA", "GGTTAGATGCTG", "CCTATACAGTGC", "CACGGTGGTACC", "TCGGAGTCGGTC", "ACACGCCGTAAG", "CTGCGAACTCCC", "AGCCGTAGATTG", "ACGTTTGGCCAA", "AAACCGACTCGG", "GCACCCACGCTA", "ATCCAGTCAAAT", "TTACCAAAACCC", "CCATCTTCTCTA", "CCAGATGTTGTT", "CACGCCGGCTCN", "TATGACTCATAA", "ATTCCTAACAAT", "GCCGCGGTCTGT", "CGTGAAGGGATC", "TAAGGCTTAAGA", "TGTGCGGTCTTA", "CGTTAACTTAGG", "CGTTTCAGCGAT", "CATAGAAAACTA", "TGGATTGTAGAC", "TAGCTGTAATTG", "CTGCCGAAGGAT", "TCGACGCAAAAT", "TGAACTGCCAAA", "GAGGGTCGACAT", "TTGATCGCCGTG", "GCACGAACACCN", "TGTATGGGGGAC", "ATACTTAACGAG", "TGTATGAAGAAG", "CCCCAGACTTCA", "GTTAGGATCCTC", "GCCGCTAACGTG", "TTTAATGCCATG", "CAGCTGGGTTTC", "CGAATCCATTTA", "TCCGTATAGTGC", "CAGCGAATTGCA", "AGATAAATCGAN", "TGTTTTATCCGA", "CTAGCGGGGGAT", "ATTGGTAAGCCG", "CGCCTTGAGAGA", "ATGAGACAAGGG", "ACATGGGGAGTC", "CACGCCGTCCCA", "GCGTCCAGACCT", "GCATTACCGTAT", "GTTAGGGTCCCT", "GTTCTCTGTGGA", "AAGCTGTTGCTN", "CTGAGCCATTGG", "AACTCGAAGCCG", "TACTGAGACACC", "CTACATACTCAA", "TATTCAAGCTTC", "AAAAGTGTTAAT", "CGCCGGGAATGA", "GTAACCTGATAC", "GGCGCTAGAGCC", "AAAGTCGCTCCC", "TTCGCACGCTGA", "CAAGGTCCATCG", "GCGGCTTAGCAN", "TTTTGCTGTTAA", "CGGAGAAATCCC", "CGGTCTACTTAN", "AGTAATTTATCG", "CGGTTCTCGTAC", "GCGTGCGCCGGA", "GGACTCGACCAA", "TATACGTCACAT", "CCGACGTCTCCG", "AGTGTGGTTGGA", "CGACCACTGGGT", "TTCCTCATCTTT", "AATCGTAGACCG", "CGCCATTTTAGG", "TTATGGCGCGGC", "GCACCGGGATTT", "GAGCTTCGTGGA", "TTTACGGGCAGC", "AAAAGTAGTACT", "TTCCTTATAACA", "GAACGAGTATGT", "TGCCTTGAATAC", "TTGATACTTTGT", "CTAATACTAGCT", "ACCCGTTACTGA", "GACGCAAGTACA", "CGAGTCTATTTC", "GTGTAAACGATA", "CTCCGCCCCTTC", "AAACCTATGTCN", "TCTAAATACTCG", "CTGCTGTTAATA", "ATTCGTCGGTAA", "CCCAAGACTGAA", "AGGGAATCGGAA", "TGTTACCACGGG", "GCTTGTGTTATT", "TAGCTAGCGCAC", "ATATTTATCTGC", "GAAAGCGAGCAT", "CGGCAGTCACCT", "ATTCAAGAGTCT", "GCCTAAGGTTAG", "CCGCTAAAGATN", "ATCGGTATATCA", "GTGCGACTTGCG", "TCGCATGGCACG", "TGCAGGACTTAT", "AGCGGTAAAACA", "ACATTATGAATT", "TTATGCCGTATN", "CAGGGCGATGAC", "CGTACGGGCGTG", "TAGAACAAATAA", "CCGTGTGATCAT", "ATTCAACGAGTC", "CTGATTTGTCGA", "ATGCCTTTGATC", "AATTGTGCCATA", "CAGACGTCTAGT", "GCTACGGATGGN", "AAGGCCTTATTA", "GTGGAAATAACC", "TTATCGTCATCN", "AAGTACCTATAC", "TCTCGTCGAAAC", "CAGTATACACTT", "CACAAAGCTCAA", "CGTTCGAAAGTG", "GCTCATCCTCTC", "GCCGACATTCGG", "TACAGGTTCGCT", "GCCAGAGAGGTA", "CTATCAACGCTA", "ACACACCGTCCG", "TTGCGGGGGGGA", "CCCCTATCTACT", "CTAATGATTCTG", "CTAGAGGGAAGG", "TCACTCCCTAGT", "GCTGGACATCTT", "ATGCCTCACCGC", "GGATCGGTTATT", "GGGCTCCTCGGT", "CATCCGTCCGCG", "AATTCTGCTGTT", "CTCCTGATCTAA", "ATAACTGACTTT", "TAACCCGGGTCA", "GAGGGCGGTAAT", "CATGAGACGCAG", "GGTCTTTGCCAT", "CCCAGTTTAGAC", "TAGCTGCTTGTA", "GACTATCTGGCA", "TATGAGCACGTG", "CGCCACATTTCA", "TCAAGGCCCACT", "GCCGGGTGTCCT", "AGACCTTCCCCG", "AGCCGACTCGGC", "ATGGAATGGTTA", "CTAGCTGAGGAT", "CGCGTTGGCGGC", "GCGTCCAGCGTC", "ACGATACACAAT", "GGCCCCGGTAAA", "ACACCCGACACA", "GCTGGAGCCACT", "CGTTACCCCCTC", "GTCATGCCCCCT", "TGCGTAAGGTGC", "TAAATACGTTAT", "GACCTACGTGAC", "CCTTTTGGGTGC", "CCCCCCATAACT", "TGGGAGCTTCAG", "AGGTTCAACAAT", "ATCGGGCTGCGA", "TCAGGAAAATCA", "CGCTTGATTGTA", "CCGCTTATACGT", "CGCATATGAGGA", "TTCTACACCGGC", "CTGTTGACTCGA", "TCGGAGTAACCT", "AGTGCAGCTTCT", "CTATTGGGAAGC", "CGCGTTCCTCAA", "CGGGCAGTAGTA", "AAAGCGTCAAGG", "GGGCAGCCCAGC", "GTATGTACAGAG", "GGCCTAGCAAGC", "CGGGGACGTCTG", "ACTAAGATATGC", "ACCGGGAACTGC", "GACAGTGTCGGT", "GCGAGGGCCCTA", "TTCGTTGGGATT", "AAGTAGTCTCCC", "GGATAATGGAAN", "TCGTTCGACTTA", "ATGAGTTCGCGA", "GACACTACAAGA", "AGCCGTTCGCAC", "CGGAACACGCTG", "ACCAAATATAAT", "TGGTGGCCGAGA", "TGCGCCACGCCA", "TAATCGCTGACG", "GATGCGGGAGTC", "GAGAGAAAAATC", "TTGCAAGGCTCG", "ATTCCAAACCTC", "GCTGGGGTGGCC", "CTACGGGGGCTC", "GGTTTACTTTGC", "ATATGTAGAAGC", "CTCATTCGGCTG", "TGTGACGGGACC", "CATTCTGATTGT", "ATGATTCGATTC", "GGAAAGGATCCC", "CTCTGTACCCGC", "GTTGGAGGGTAA", "GGCTTTGGAGCT", "TCCTGCCCCAGC", "GGGCGTTCTGTG", "CGGCGCCAGGGC", "AAATCGGGAGCA", "TAGCGGAATGGA", "ACTAGAGTTGGC", "GCATGGAAACCA", "GGTTATGAAACC", "CTAGTCAAGAGG", "CTATTGTAACCC", "AGAGTTAGCGCC", "CATGGAATAAGA", "AGCCTTCGTGAA", "TGAAGTTGTCCA", "CCTTGTACTCTA", "GTCGACGTGAGT", "CCGCACACAAAT", "GTCTCAAGAATT", "TAGTCTAAGACC", "CAATGCTGCTCG", "TCCCTAAAGACA", "AGGTCCACAGTG", "TGTTCGATTGCT", "GCGGGGGCCTTC", "GATGCTGTTTCA", "GGCATTCAGGGG", "GAGGATTAGTGC", "GCGGAGCCTCCT", "GCGCCGCAGAGC", "TGGATTGTTGCC", "AAATTTGAGAGG", "AAAACGGACATT", "TGAACGTCCTAC", "CCGTATCGCGGT", "ACAGGCTCACAA", "ATGAAGGAGAGT", "AGGTATGCCCGC", "CGTTTCTTGGGA", "AAGGCCAGTGTC", "TATGTTGTACCT", "TAATGCGCCCAT", "AAGGAAGCCCCC", "AAGTTATTACAT", "GTCGTAGTTGAT", "ATTGAATGCCCT", "TGACCAGTTGTT", "GCTGTAATCTAA", "TTGAATGCTACC", "AGACTGAAGTTG", "GAGGATTGCCCG", "TGATGGTGCTAA", "GATTGCGTATGT", "AGACTCAGGATT", "TTGTGAGTGCAG", "GGCGGTAATTCT", "AAGCCGTGCTGT", "GTTGTAGGAAGT", "GTTAATGCCGTC", "TGGTCCCCTCAG", "AAATGTCGGTGA", "CAGGAAACATTC", "ATGTGCTGACCA", "ACACGCTGTGCT", "AGACAATTGCCC", "TTTACATCCAAC", "GCCGCTACCCAG", "CAGAGGGCGCGG", "GTTATTCGGCGG", "CACTCGACGGTC", "CTGCTGTTTCCN", "TATAATCGGGCC", "AGCCCTAGACCG", "ATCGGGAGGCGT", "CCTGAAAGCTAG", "GCGTGAGCGTCG", "GTACCACAGAGT", "TTGATGTCCGCA", "ACTGCAGAACGT", "TACTAAGATGAA", "TAATACGATTCC", "GATAGCATCGCA", "GCAACATACTGT", "GTGTCGGCGCGA", "CTAGGTCCCGCG", "GGTGCTCATAGA", "AGCGCCGCCAGG", "CCTTCCACACTG", "GGTTCTAGCCTC", "TTCGAACCCGAG", "TTTATGTCCAGA", "CTCCATCTAGAT", "AAACGTGTTAAC", "TATTAAAAACTA", "CAAGAGTGCGTT", "CAACGAAACACN", "TGCCGAACAGGG", "CGGCTTGGGCAT", "GACGGGACACAT", "AACGTTCTGGTG", "CCGTGATGAGGT", "CCTAAACGCCGT", "GTTTCAGTCTCC", "GCCGCGGAAGGT", "CCGGATAATGAC", "TGTTCTGGTGTA", "CATACGGCAAGT", "CGAGTGGCATAT", "TCCAAGCTGCAA", "AGTTAAGGACTC", "GAGAAGTGGAAT", "GTGCGTTGACCG", "GATACCGTCTGT", "GAACGGGCGAGT", "TTTTAAGTACGG", "TCGTCCTATCAC", "GCTTGCGAAAGC", "GTCGCTACCGGT", "ACCTCACACTCT", "CAAGCGGTTGGT", "ACTAGGCAATAT", "TGTGTGAGTAGA", "GCCTGAGTGAGG", "TTGCGATGAGCT", "AACAGGGGCTCN", "TGCTTGTGAGTC", "CCTAAAAAGAAT", "TTCGATCGACTT", "TGTTCTAGGAAA", "ACCGATGTTCCC", "GTCCCAGGGGGG", "CCGGACGAACCG", "GGCCCGTAGGTC", "TCAGGATTAGAT", "TCCATTCAACTG", "CACGACGTTATT", "ACTTCTAATATT", "GGTGATGTGTGG", 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