{
  "_id": "6aca1584fe5cc25786e847c2",
  "Package": "COHCAPanno",
  "Type": "Package",
  "Title": "Annotations for City of Hope CpG Island Analysis Pipeline",
  "Version": "1.49.0",
  "Date": "2013-12-11",
  "Author": "Charles Warden",
  "Maintainer": "Charles Warden <cwarden45@gmail.com>",
  "Description": "Provides genomic location, nearby CpG island and nearby\ngene information for common Illumina methylation array\nplatforms",
  "License": "GPL-3",
  "LazyLoad": "yes",
  "biocViews": "Homo_sapiens_Data, MicroarrayData, MethylationArrayData,\nCpGIslandData, GEO, ArrayExpress",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:26:39 UTC",
  "RemoteUrl": "https://github.com/bioc/COHCAPanno",
  "RemoteRef": "HEAD",
  "RemoteSha": "8c5ff5d8caa05d530fea6613ae7e7393a8523967",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-10 10:33:00 UTC",
    "User": "root"
  },
  "_user": "bioc",
  "_type": "src",
  "_file": "COHCAPanno_1.49.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/7b3fb9b7564b26dc1522cb6c3f8fc08a7367cfa338d150d1559179df2f86b5f3",
  "_filesize": 9807429,
  "_sha256": "7b3fb9b7564b26dc1522cb6c3f8fc08a7367cfa338d150d1559179df2f86b5f3",
  "_expires": "2027-01-18T10:37:54.000Z",
  "_created": "2026-10-10T10:33:00.000Z",
  "_published": "2026-10-10T10:37:56.589Z",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/38045115278",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_bioccheck": {
    "error": 1,
    "warning": 4,
    "note": 5
  },
  "_upstream": "https://github.com/bioc/COHCAPanno",
  "_commit": {
    "id": "8c5ff5d8caa05d530fea6613ae7e7393a8523967",
    "author": "lshep <lori.shepherd@roswellpark.org>",
    "committer": "lshep <lori.shepherd@roswellpark.org>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379199
  },
  "_maintainer": {
    "name": "Charles Warden",
    "email": "cwarden45@gmail.com",
    "login": "cwarden45",
    "mastodon": "@cwarden45@mastodon.social",
    "linkedin": "in/cwarden45",
    "description": "UCR \"Genetics, Genomics, and Bioinformatics\" PhD Student.  I also have genomics data for myself and my pet cat.",
    "uuid": 7663033
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 114193598823,
      "time": 117,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "11667198472"
    },
    {
      "job": 114193598710,
      "time": 214,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11667383473"
    },
    {
      "job": 114193598745,
      "time": 232,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11667308709"
    },
    {
      "job": 114193051890,
      "time": 188,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11667612745"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.49.0",
      "bioc": "3.24",
      "repository": "data/experiment"
    },
    {
      "branch": "release",
      "version": "1.48.0",
      "bioc": "3.23",
      "repository": "data/experiment"
    }
  ],
  "_topics": [
    "homo_sapiens_data",
    "microarraydata",
    "methylationarraydata",
    "cpgislanddata",
    "geo",
    "arrayexpress",
    "datapkg"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 476,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_searchresults": 0,
  "_datapkg": true,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/COHCAPanno.html",
    "extra/contents.json",
    "extra/manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [],
  "_datasets": [
    {
      "name": "COHCAP.27k",
      "title": "Annotation for UCSC CpG Islands for 27k Illumina Human Methylation Array",
      "object": "COHCAP.27k",
      "file": "COHCAP.27k.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "SiteID",
        "Chr",
        "Loc",
        "Gene",
        "Island"
      ],
      "rows": 27578,
      "table": true,
      "tojson": true
    },
    {
      "name": "COHCAP.450k.HMM",
      "title": "Annotation for HMM CpG Islands for 450k Illumina Human Methylation Array",
      "object": "COHCAP.450k.HMM",
      "file": "COHCAP.450k.HMM.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "SiteID",
        "Chr",
        "Loc",
        "Gene",
        "Island"
      ],
      "rows": 485512,
      "table": true,
      "tojson": true
    },
    {
      "name": "COHCAP.450k.UCSC",
      "title": "Annotation for UCSC CpG Islands for 450k Illumina Human Methylation Array",
      "object": "COHCAP.450k.UCSC",
      "file": "COHCAP.450k.UCSC.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "SiteID",
        "Chr",
        "Loc",
        "Gene",
        "Island"
      ],
      "rows": 485512,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "COHCAP.27k",
      "title": "Annotation for UCSC CpG Islands for 27k Illumina Human Methylation Array",
      "topics": [
        "COHCAP.27k"
      ]
    },
    {
      "page": "COHCAP.450k.HMM",
      "title": "Annotation for HMM CpG Islands for 450k Illumina Human Methylation Array",
      "topics": [
        "COHCAP.450k.HMM"
      ]
    },
    {
      "page": "COHCAP.450k.UCSC",
      "title": "Annotation for UCSC CpG Islands for 450k Illumina Human Methylation Array",
      "topics": [
        "COHCAP.450k.UCSC"
      ]
    }
  ],
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "COHCAPanno.Rnw",
      "filename": "COHCAPanno.pdf",
      "title": "COHCAPanno Vignette",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2014-01-13 18:26:16",
      "modified": "2014-01-13 18:26:16",
      "commits": 1
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "cohcapanno",
  "_universes": [
    "bioc",
    "cwarden45"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.49.0",
      "date": "2026-10-10T10:37:07.000Z",
      "distro": "resolute",
      "commit": "8c5ff5d8caa05d530fea6613ae7e7393a8523967",
      "fileid": "https://r2.ropensci.org/8c878c1a46a5611c3bd9991f994d48426a4641a000501930172f4917368001c1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045115278"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.49.0",
      "date": "2026-10-10T10:37:28.000Z",
      "distro": "resolute",
      "commit": "8c5ff5d8caa05d530fea6613ae7e7393a8523967",
      "fileid": "https://r2.ropensci.org/b5a8ea46e746055be765651a804255fd65c02f94a61761a7b10b59e8a14eb802",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045115278"
    }
  ]
}