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COCOA can identify region sets that are\nassociated with epigenetic variation between samples and\nincrease understanding of variation in your data.", "Authors@R": "c(person(\"John\", \"Lawson\", email=\"jtl2hk@virginia.edu\", role=c(\"aut\", \"cre\")), person(\"Nathan\", \"Sheffield\", role=c(\"aut\"), comment=\"http://www.databio.org\"), person(\"Jason\", \"Smith\", role=c(\"ctb\")))", "VignetteBuilder": "knitr", "License": "GPL-3", "biocViews": "Epigenetics, DNAMethylation, ATACSeq, DNaseSeq, MethylSeq,\nMethylationArray, PrincipalComponent, GenomicVariation,\nGeneRegulation, GenomeAnnotation, SystemsBiology,\nFunctionalGenomics, ChIPSeq, Sequencing, ImmunoOncology", "URL": "http://code.databio.org/COCOA/", "BugReports": "https://github.com/databio/COCOA", "RoxygenNote": "7.1.1", "Config/pak/sysreqs": "make libbz2-dev libicu-dev liblzma-dev libpng-dev\nlibxml2-dev libssl-dev perl xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:49:01 UTC", "RemoteUrl": "https://github.com/bioc/COCOA", "RemoteRef": "HEAD", "RemoteSha": "b65d393262800a8c0ed3cea586d808bfdd5d1dca", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-23 09:45:34 UTC", "User": "root" }, "Author": "John Lawson [aut, cre],\nNathan Sheffield [aut] (http://www.databio.org),\nJason Smith [ctb]", "Maintainer": "John Lawson ", "MD5sum": "b88d82e3e5a2c48dd2e020227d179138", "_user": "bioc", "_type": "src", "_file": "COCOA_2.27.0.tar.gz", "_fileid": "1abf8e23158602a6b3ed737cfbf599c5b4e7d07d1228c98d37b3ac952812662d", "_filesize": 3856728, "_sha256": "1abf8e23158602a6b3ed737cfbf599c5b4e7d07d1228c98d37b3ac952812662d", "_created": "2026-05-23T09:45:34.000Z", "_published": "2026-05-23T09:55:09.412Z", "_jobs": [ { "job": 77513269894, "time": 221, "config": "bioc-checks", "r": "4.6.0", "check": "NOTE", "artifact": "7176068119" }, { "job": 77513269899, "time": 502, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7176091585" }, { 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