{
  "_id": "6a13efb9acfb0bcc41d3000f",
  "Package": "CFAssay",
  "Type": "Package",
  "Title": "Statistical analysis for the Colony Formation Assay",
  "Version": "1.47.0",
  "Date": "2020-03-27",
  "Author": "Herbert Braselmann",
  "Maintainer": "Herbert Braselmann <hbraselmann@online.de>",
  "Description": "The package provides functions for calculation of\nlinear-quadratic cell survival curves and for ANOVA of\nexperimental 2-way designs along with the colony formation\nassay.",
  "License": "LGPL",
  "biocViews": "CellBasedAssays, CellBiology, ImmunoOncology, Regression,\nSurvival",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:40:10 UTC",
  "RemoteUrl": "https://github.com/bioc/CFAssay",
  "RemoteRef": "HEAD",
  "RemoteSha": "d2d7549e18ead981308fbd170638fdf68f41de52",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-25 06:41:08 UTC",
    "User": "root"
  },
  "MD5sum": "e4e6202b35ae3666e1e70cbf432eaf39",
  "_user": "bioc",
  "_type": "src",
  "_file": "CFAssay_1.47.0.tar.gz",
  "_fileid": "197e36061eb8738683f1dca2c5f1ff2bf3238950344ca62193bcf88f9ff1f9bb",
  "_filesize": 334073,
  "_sha256": "197e36061eb8738683f1dca2c5f1ff2bf3238950344ca62193bcf88f9ff1f9bb",
  "_created": "2026-05-25T06:41:08.000Z",
  "_published": "2026-05-25T06:44:09.660Z",
  "_jobs": [
    {
      "job": 77668318182,
      "time": 126,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7193055697"
    },
    {
      "job": 77668318184,
      "time": 123,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7193055288"
    },
    {
      "job": 77668318183,
      "time": 155,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7193061998"
    },
    {
      "job": 77668318191,
      "time": 81,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7193045713"
    },
    {
      "job": 77668318172,
      "time": 82,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7193045860"
    },
    {
      "job": 77668062872,
      "time": 137,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7193026402"
    },
    {
      "job": 77668318168,
      "time": 79,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7193045594"
    },
    {
      "job": 77668318240,
      "time": 62,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7193041402"
    },
    {
      "job": 77668318249,
      "time": 65,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7193041952"
    },
    {
      "job": 77668318192,
      "time": 73,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7193043778"
    }
  ],
  "_bioccheck": {
    "error": 2,
    "warning": 4,
    "note": 14
  },
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/bioc/CFAssay",
  "_commit": {
    "id": "d2d7549e18ead981308fbd170638fdf68f41de52",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777380010
  },
  "_maintainer": {
    "name": "Herbert Braselmann",
    "email": "hbraselmann@online.de",
    "login": "hbrmuc",
    "description": "privat",
    "uuid": 54470535
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10.0",
      "role": "Depends"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.47.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.46.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "cellbasedassays",
    "cellbiology",
    "immunooncology",
    "regression",
    "survival"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 323,
    "source": "https://www.bioconductor.org/packages/stats/bioc/CFAssay"
  },
  "_mentions": 6,
  "_searchresults": 1,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/CFAssay.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "cellsurvLQdiff",
    "cellsurvLQfit",
    "cfa2way",
    "pes",
    "plot.cellsurvLQfit",
    "plotExp",
    "plotExp.cellsurvLQfit",
    "plotExp.cfa2way",
    "plotExp.default",
    "print.cellsurvLQdiff",
    "print.cellsurvLQfit",
    "print.cfa2way",
    "sfpmean"
  ],
  "_help": [
    {
      "page": "cellsurvLQdiff",
      "title": "Comparison of two linear-quadratic cell survival curves",
      "topics": [
        "cellsurvLQdiff"
      ]
    },
    {
      "page": "cellsurvLQfit",
      "title": "Fit the linear-quadratic (LQ) model to cell survival data",
      "topics": [
        "cellsurvLQfit"
      ]
    },
    {
      "page": "cfa2way",
      "title": "Two-way analysis for cell survival data",
      "topics": [
        "cfa2way"
      ]
    },
    {
      "page": "pes",
      "title": "Calculation of plating efficiencies from a curve data set containing one specified curve",
      "topics": [
        "pes"
      ]
    },
    {
      "page": "plot.cellsurvLQfit",
      "title": "Plot of an LQ model fit",
      "topics": [
        "plot.cellsurvLQfit"
      ]
    },
    {
      "page": "plotExp",
      "title": "Generic plotting of experimental repeats",
      "topics": [
        "plotExp"
      ]
    },
    {
      "page": "plotExp.cellsurvLQfit",
      "title": "Diagnostic plots of LQ model versus experiments",
      "topics": [
        "plotExp.cellsurvLQfit"
      ]
    },
    {
      "page": "plotExp.cfa2way",
      "title": "Diagnostic plot of experimental replicates for two-way analysis of cell survival data",
      "topics": [
        "plotExp.cfa2way"
      ]
    },
    {
      "page": "plotExp.default",
      "title": "Default function for plotting of experimental repeats",
      "topics": [
        "plotExp.default"
      ]
    },
    {
      "page": "print.cellsurvLQdiff",
      "title": "Print test results of comparison of two linear-quadratic cell survival curves",
      "topics": [
        "print.cellsurvLQdiff"
      ]
    },
    {
      "page": "print.cellsurvLQfit",
      "title": "Print summary of an LQ-model fit for cell survival data",
      "topics": [
        "print.cellsurvLQfit"
      ]
    },
    {
      "page": "print.cfa2way",
      "title": "Print summary of two-way analysis for cell survival data.",
      "topics": [
        "print.cfa2way"
      ]
    },
    {
      "page": "sfpmean",
      "title": "Pointwise mean survival fractions for curves with several experimental replicates",
      "topics": [
        "sfpmean"
      ]
    }
  ],
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "cfassay.Rnw",
      "filename": "cfassay.pdf",
      "title": "CFAssay",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2014-10-11 00:28:51",
      "modified": "2020-03-29 16:53:27",
      "commits": 4
    }
  ],
  "_score": 4.079181246047625,
  "_indexed": true,
  "_nocasepkg": "cfassay",
  "_universes": [
    "bioc",
    "hbrmuc"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.47.0",
      "date": "2026-05-25T06:43:14.000Z",
      "distro": "noble",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "69148514a3860d078ce50b2fb6a75994ccac510ff0aa65d919571e7d7506a0ac",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.47.0",
      "date": "2026-05-25T06:43:45.000Z",
      "distro": "noble",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "9d321210f03266abdec910c08abd39c8dcc1f57eabd87cd67c4e2d1140bfad6f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.47.0",
      "date": "2026-05-25T06:42:29.000Z",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "b63a41c40a9d40d4b89a7de17db541277c162b54956ea9bf691477dbd84e691c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.47.0",
      "date": "2026-05-25T06:42:33.000Z",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "44983a93a4d0d588c5f87db442c453a13f0ce1561862f8199d2127c4769ac298",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.47.0",
      "date": "2026-05-25T06:42:41.000Z",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "299c089ddbb92b399a8a6497184b50beffd047ac07697f5cf597de037cf3bb12",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.47.0",
      "date": "2026-05-25T06:42:08.000Z",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "e047e4c9edcf7c1c20aa41903678c878334df28c589b6a2f1bb2cfcf101519dd",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.47.0",
      "date": "2026-05-25T06:42:10.000Z",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "59c8ce13692f05ecf4308579e6a3a375f0321be6b1137ec4374d187a25e98e08",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.47.0",
      "date": "2026-05-25T06:42:18.000Z",
      "commit": "d2d7549e18ead981308fbd170638fdf68f41de52",
      "fileid": "ab2d42378b9fe59c56750349e01d1d4a44e29d9490483481dac5deea1b6204b3",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26387118421"
    }
  ]
}