{ "_id": "6ad3158762c1581dfb2fa4ea", "Package": "BiocBuildReporter", "Type": "Package", "Title": "Functions to process a bioconductor build report database", "Version": "1.1.1", "Description": "This package reads remote parquet files that have\nprocessed Bioconductor build report logs. Users may query the\ntables directly for specific information or use pre-defined\nhelper functions for common queries. The logs processed are\nfrom https://bioconductor.org/checkResults/. In the future we\nwill extend this package out to include processing of\nr-universe logs.", "License": "Apache License (>= 2)", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "Authors@R": "c(\nperson(given=\"Sean\", family=\"Davis\", role = c(\"aut\"), email = 'seandavi@gmail.com'),\nperson(given=\"Lori\", family=\"Shepherd\", role = c(\"aut\", \"cre\"), email = \"lori.shepherd@roswellpark.org\",comment=c(ORCID = \"0000-0002-3242-0582\")))", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "URL": "https://github.com/lshep/BiocBuildReporter.git", "BugReports": "https://github.com/lshep/BiocBuildReporter/issues", "biocViews": "Software, Infrastructure", "Config/pak/sysreqs": "cmake libicu-dev libssl-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-05-20 15:03:26 UTC", "RemoteUrl": "https://github.com/bioc/BiocBuildReporter", "RemoteRef": "HEAD", "RemoteSha": "13ae3c462141b335a31fa547915e00bdacf6a996", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-17 06:22:48 UTC", "User": "root" }, "Author": "Sean Davis [aut],\nLori Shepherd [aut, cre] (ORCID:\n)", "Maintainer": "Lori Shepherd ", "_user": "bioc", "_type": "src", "_file": "BiocBuildReporter_1.1.1.tar.gz", "_fileid": "https://r2.ropensci.org/ab27175fda0769af93ceeae254487ee8ae6bebf7f988486e4610d79278f5b64e", "_filesize": 494780, "_sha256": "ab27175fda0769af93ceeae254487ee8ae6bebf7f988486e4610d79278f5b64e", "_expires": "2027-01-25T06:28:21.000Z", "_created": "2026-10-17T06:22:48.000Z", "_published": "2026-10-17T06:28:23.197Z", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648", "_status": "success", "_host": "GitHub-Actions", "_bioccheck": { "error": 0, "warning": 0, "note": 5 }, "_upstream": "https://github.com/bioc/BiocBuildReporter", "_commit": { "id": "13ae3c462141b335a31fa547915e00bdacf6a996", "author": "lshep ", "committer": "lshep ", "message": "version bump for bug correction\n", "time": 1779289406 }, "_maintainer": { "name": "Lori Shepherd", "email": "lori.shepherd@roswellpark.org", "login": "lshep", "description": "", "uuid": 18724380, "orcid": "0000-0002-3242-0582" }, "_distro": "resolute", "_jobs": [ { "job": 117329410469, "time": 153, "config": "bioc-checks", "r": "4.6.1", "check": "NOTE", "artifact": "12091738321" }, { "job": 117329410430, "time": 290, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12092382833" }, { "job": 117329410481, "time": 208, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12092970090" }, { "job": 117329410465, "time": 201, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "12092686346" }, { "job": 117329410478, "time": 188, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12092960043" }, { "job": 117328630492, "time": 243, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12092616268" }, { "job": 117329410527, "time": 100, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12092880308" }, { "job": 117329410438, "time": 146, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12091833216" }, { "job": 117329410492, "time": 107, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "12092665707" }, { "job": 117329410503, "time": 158, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12092585951" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.5.0", "role": "Depends" }, { "package": "arrow", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "BiocFileCache", "role": "Imports" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "ggplot2", "role": "Suggests" }, { "package": "tidyr", "role": "Suggests" }, { "package": "stringr", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-03", "n": 6 }, { "week": "2026-04", "n": 2 }, { "week": "2026-05", "n": 1 }, { "week": "2026-10", "n": 1 }, { "week": "2026-12", "n": 2 }, { "week": "2026-18", "n": 2 }, { "week": "2026-21", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.1.1", "bioc": "3.24", "repository": "bioc" }, { "branch": "release", "version": "1.0.1", "bioc": "3.23", "repository": "bioc" } ], "_topics": [ "software", "infrastructure" ], "_stars": 0, "_contributors": [ { "user": "lshep", "count": 14, "uuid": 18724380 }, { "user": "bisaloo", "count": 4, "uuid": 10783929 }, { "user": "jwokaty", "count": 2, "uuid": 1744257 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 477, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 414, "source": "https://www.bioconductor.org/packages/stats/bioc/BiocBuildReporter" }, "_devurl": "https://github.com/lshep/biocbuildreporter", "_searchresults": 2, "_rbuild": "4.6.1", "_assets": [ "extra/BiocBuildReporter.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_homeurl": "https://github.com/lshep/biocbuildreporter", "_realowner": "bioc", "_cranurl": false, "_exports": [ "get_all_bbs_tables", "get_bbs_table", "get_build_report", "get_failing_packages", "get_latest_branches", "get_package_build_results", "get_package_release_info", "list_all_branches", "list_all_builders", "package_error_count", "package_failures_over_time" ], "_help": [ { "page": "bbs_cache", "title": "Custom Environment to store downloaded parquet tibbles.", "topics": [ ".bbs_cache", "bbs_cache" ] }, { "page": "BiocBuildReporter", "title": "BiocBuildReporter: Functions to process a bioconductor build report database", "topics": [ "BiocBuildReporter-package", "BiocBuildReporter" ] }, { "page": "get_all_bbs_tables", "title": "Retrieve all available Bioconductor build system parquet files", "topics": [ "get_all_bbs_tables" ] }, { "page": "get_bbs_table", "title": "Retrieve a remotely read parquet file of Bioconductor build data", "topics": [ "get_bbs_table" ] }, { "page": "get_build_report", "title": "Get a report for any given day from the Bioconductor Build System", "topics": [ "get_build_report" ] }, { "page": "get_failing_packages", "title": "Get list of failing packages for the most recent build", "topics": [ "get_failing_packages" ] }, { "page": "get_latest_branches", "title": "Get currently active Bioconductor git branches", "topics": [ "get_latest_branches" ] }, { "page": "get_package_build_results", "title": "Get the most recent build result data for a given package on a given branch", "topics": [ "get_package_build_results" ] }, { "page": "get_package_release_info", "title": "Get git information for a given package across all Bioconductor releases", "topics": [ "get_package_release_info" ] }, { "page": "list_all_branches", "title": "Get list of all Bioconductor git branches", "topics": [ "list_all_branches" ] }, { "page": "list_all_builders", "title": "Get list of all Bioconductor builders", "topics": [ "list_all_builders" ] }, { "page": "package_error_count", "title": "Get a count of how many time a package failed on the Bioconductor Build System", "topics": [ "package_error_count" ] }, { "page": "package_failures_over_time", "title": "Get rough timeline overview of package failing events", "topics": [ "package_failures_over_time", "package_failure_over_time" ] } ], "_readme": "https://github.com/bioc/BiocBuildReporter/raw/HEAD/README.md", "_rundeps": [ "arrow", "askpass", "assertthat", "BiocFileCache", "bit", "bit64", "blob", "cachem", "cli", "cpp11", "curl", "DBI", "dbplyr", "dplyr", "fastmap", "filelock", "generics", "glue", "httr2", "lifecycle", "magrittr", "memoise", "openssl", "pillar", "pkgconfig", "purrr", "R6", "rlang", "RSQLite", "stringi", "stringr", "sys", "tibble", "tidyr", "tidyselect", "utf8", "vctrs", "withr" ], "_vignettes": [ { "source": "BiocBuildReporter.Rmd", "filename": "BiocBuildReporter.html", "title": "BiocBuildReporter Data Use Cases", "author": "BiocBuildReporter Team", "engine": "knitr::rmarkdown", "headings": [ "Background", "Installation and Loading", "Accessing Bioconductor Build Report Data", "Getting All Available Tables", "Getting Individual Tables", "Remote Read vs Local Download", "Package-Specific Queries", "Package Release Information", "Package Build Results", "Package Error Counts", "Package Failures Over Time", "Exploratory Data Analysis", "Package Growth Over Time", "Build Status Distribution", "Platform-Specific Analysis", "Build Stage Analysis", "Most Problematic Packages", "Maintainer Analysis", "Temporal Analysis", "Bioconductor Report Overview", "Get Bioconductor Build Report", "Get List of Failing Packages", "Conclusion" ], "created": "2026-03-06 17:22:27", "modified": "2026-03-16 17:02:49", "commits": 2 } ], "_score": 4.845098040014257, "_indexed": true, "_nocasepkg": "biocbuildreporter", "_universes": [ "bioc", "lshep" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1.1", "date": "2026-10-17T06:26:33.000Z", "distro": "resolute", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/345d2ada91c33b9d5cf7d775feec91fee68f26d2b5902ecee65416bd6e677794", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" }, { "r": "4.6.1", "os": "linux", "version": "1.1.1", "date": "2026-10-17T06:25:42.000Z", "distro": "resolute", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/9e964cd5c04107c04060db1ab872c6cd98d80ebbc16d5865cd3c6a896ffd7e96", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" }, { "r": "4.5.3", "os": "mac", "version": "1.1.1", "date": "2026-10-17T06:24:33.000Z", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/0625003dfd2d184dd9b4c1fcea8460d56aa0b12292ba843bb0b617b0084ca15e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" }, { "r": "4.6.1", "os": "mac", "version": "1.1.1", "date": "2026-10-17T06:24:19.000Z", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/bf9fcbbcecd573b946f6176360ddefa8a183570b02005f5dfe1477066c76ec0b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" }, { "r": "4.6.0", "os": "wasm", "version": "1.1.1", "date": "2026-10-17T06:24:48.000Z", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/c37c224b4b146cbb233f62c9a593c524f7112c49132c6ef081b0138dd5a82e39", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" }, { "r": "4.7.0", "os": "win", "version": "1.1.1", "date": "2026-10-17T06:24:13.000Z", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/9dc8042c320bd19ea966981e16d5a6d817cc3bd50b1f5899894c89ccc9c37fcf", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" }, { "r": "4.5.3", "os": "win", "version": "1.1.1", "date": "2026-10-17T06:23:52.000Z", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/338ec2a341d9446204b309c362e8a6ee6fc2b7588b5cade529b9c7a12bb58d8a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" }, { "r": "4.6.1", "os": "win", "version": "1.1.1", "date": "2026-10-17T06:24:21.000Z", "commit": "13ae3c462141b335a31fa547915e00bdacf6a996", "fileid": "https://r2.ropensci.org/b077f51853998d446cbb4be87b35bc8a8c3e4fe5543fc48cf423d6b2e79d9ead", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39009430648" } ] }