{
  "_id": "6a49657a3c3572b93bf7ec8a",
  "Package": "AHMassBank",
  "Type": "Package",
  "Title": "MassBank Annotation Resources for AnnotationHub",
  "Version": "1.13.0",
  "Encoding": "UTF-8",
  "Authors@R": "c(person(given = \"Johannes\", family = \"Rainer\",\nemail = \"Johannes.Rainer@eurac.edu\",\nrole = \"cre\",\ncomment = c(ORCID = \"0000-0002-6977-7147\")))",
  "Description": "Supplies AnnotationHub with MassBank metabolite/compound\nannotations bundled in CompDb SQLite databases. CompDb SQLite\ndatabases contain general compound annotation as well as\nfragment spectra representing fragmentation patterns of\ncompounds' ions. MassBank data is retrieved from\nhttps://massbank.eu/MassBank and processed using helper\nfunctions from the CompoundDb Bioconductor package into\nredistributable SQLite databases.",
  "VignetteBuilder": "knitr",
  "License": "Artistic-2.0",
  "LazyLoad": "yes",
  "BugReports": "https://github.com/jorainer/AHMassBank/issues",
  "URL": "https://github.com/jorainer/AHMassBank",
  "biocViews": "MassSpectrometry, AnnotationHubSoftware",
  "Roxygen": "list(markdown=TRUE)",
  "RoxygenNote": "7.2.3",
  "Config/pak/sysreqs": "make libbz2-dev libicu-dev liblzma-dev libpng-dev\nlibxml2-dev libssl-dev xz-utils zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 13:00:18 UTC",
  "RemoteUrl": "https://github.com/bioc/AHMassBank",
  "RemoteRef": "HEAD",
  "RemoteSha": "e0dbabf908fd90541771a29bb136d12694e93069",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-23 06:51:23 UTC",
    "User": "root"
  },
  "Author": "Johannes Rainer [cre] (ORCID: <https://orcid.org/0000-0002-6977-7147>)",
  "Maintainer": "Johannes Rainer <Johannes.Rainer@eurac.edu>",
  "_user": "bioc",
  "_type": "src",
  "_file": "AHMassBank_1.13.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/0d5015718d4e9abaea0cfb2dc884457bfd3878a7c9e0f7926d9cbaaaceb63d5e",
  "_filesize": 67508,
  "_sha256": "0d5015718d4e9abaea0cfb2dc884457bfd3878a7c9e0f7926d9cbaaaceb63d5e",
  "_expires": "2026-10-12T19:56:40.000Z",
  "_created": "2026-06-23T06:51:23.000Z",
  "_published": "2026-07-04T19:56:42.258Z",
  "_bioccheck": {
    "error": 0,
    "warning": 0,
    "note": 3
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202",
  "_status": "success",
  "_upstream": "https://github.com/bioc/AHMassBank",
  "_commit": {
    "id": "e0dbabf908fd90541771a29bb136d12694e93069",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777381218
  },
  "_maintainer": {
    "name": "Johannes Rainer",
    "email": "johannes.rainer@eurac.edu",
    "login": "jorainer",
    "mastodon": "@jorainer@fediscience.org",
    "bluesky": "@jorainer.bsky.social",
    "linkedin": "in/jorainer",
    "orcid": "0000-0002-6977-7147",
    "description": "Computational Mass Spectrometry and Metabolomics, mostly; love R coding and Emacs; member of the Bioconductor Community Advisory Board.",
    "uuid": 5506112
  },
  "_distro": "noble",
  "_jobs": [
    {
      "job": 85162361071,
      "time": 212,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7813557235"
    },
    {
      "job": 85162361152,
      "time": 377,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7813606254"
    },
    {
      "job": 85162361169,
      "time": 427,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813620794"
    },
    {
      "job": 85162361060,
      "time": 276,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7813577073"
    },
    {
      "job": 85162360981,
      "time": 203,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813554402"
    },
    {
      "job": 85162361057,
      "time": 435,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813491352"
    },
    {
      "job": 85162360958,
      "time": 165,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813543013"
    },
    {
      "job": 85162361148,
      "time": 284,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7813579267"
    },
    {
      "job": 85162361157,
      "time": 270,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7813575234"
    },
    {
      "job": 85162361055,
      "time": 329,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813592552"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2",
      "role": "Depends"
    },
    {
      "package": "AnnotationHubData",
      "version": ">= 1.5.24",
      "role": "Imports"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "AnnotationHub",
      "version": ">= 2.7.13",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "methods",
      "role": "Suggests"
    },
    {
      "package": "CompoundDb",
      "version": ">= 1.1.4",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.13.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.12.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "massspectrometry",
    "annotationhubsoftware"
  ],
  "_stars": 1,
  "_contributors": [
    {
      "user": "jorainer",
      "count": 15,
      "uuid": 5506112
    },
    {
      "user": "jwokaty",
      "count": 8,
      "uuid": 1744257
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 441,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_devurl": "https://github.com/jorainer/ahmassbank",
  "_searchresults": 1,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/AHMassBank.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/jorainer/ahmassbank",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [],
  "_help": [],
  "_rundeps": [
    "abind",
    "AnnotationDbi",
    "AnnotationForge",
    "AnnotationHub",
    "AnnotationHubData",
    "askpass",
    "BH",
    "Biobase",
    "BiocBaseUtils",
    "BiocCheck",
    "BiocFileCache",
    "BiocGenerics",
    "BiocIO",
    "BiocManager",
    "BiocParallel",
    "BiocVersion",
    "biocViews",
    "Biostrings",
    "bit",
    "bit64",
    "bitops",
    "blob",
    "cachem",
    "callr",
    "cigarillo",
    "cli",
    "codetools",
    "commonmark",
    "cpp11",
    "crayon",
    "curl",
    "DBI",
    "dbplyr",
    "DelayedArray",
    "dplyr",
    "evaluate",
    "fastmap",
    "filelock",
    "formatR",
    "futile.logger",
    "futile.options",
    "generics",
    "GenomeInfoDb",
    "GenomicAlignments",
    "GenomicFeatures",
    "GenomicRanges",
    "glue",
    "graph",
    "highr",
    "httr",
    "httr2",
    "IRanges",
    "jsonlite",
    "KEGGREST",
    "knitr",
    "lambda.r",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "memoise",
    "mime",
    "openssl",
    "OrganismDbi",
    "otel",
    "pillar",
    "pkgconfig",
    "png",
    "processx",
    "ps",
    "purrr",
    "R6",
    "rappdirs",
    "RBGL",
    "RCurl",
    "restfulr",
    "Rhtslib",
    "rjson",
    "rlang",
    "Rsamtools",
    "RSQLite",
    "rtracklayer",
    "RUnit",
    "rvest",
    "S4Arrays",
    "S4Vectors",
    "selectr",
    "Seqinfo",
    "snow",
    "SparseArray",
    "stringdist",
    "stringi",
    "stringr",
    "SummarizedExperiment",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "UCSC.utils",
    "utf8",
    "vctrs",
    "withr",
    "xfun",
    "XML",
    "xml2",
    "XVector",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "creating-MassBank-CompDbs.Rmd",
      "filename": "creating-MassBank-CompDbs.html",
      "title": "MassBank Data for AnnotationHub",
      "author": "Johannes Rainer",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Fetch MassBank CompDb Databases from AnnotationHub",
        "Creating CompDb Databases from MassBank",
        "Session Information"
      ],
      "created": "2022-08-30 07:36:25",
      "modified": "2023-03-29 07:46:53",
      "commits": 2
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "ahmassbank",
  "_universes": [
    "bioc",
    "jorainer"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.13.0",
      "date": "2026-06-23T06:55:18.000Z",
      "distro": "noble",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/28d902ebac7a8a0a752750abd8dc45da7e932ef424bb8426f51bfe663d447268",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.13.0",
      "date": "2026-06-23T06:56:08.000Z",
      "distro": "noble",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/339b74d9ad6fa85aacb47c3bdb7a45e7febb9d3bb989b20b7c65dbb6cc18008e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.13.0",
      "date": "2026-06-23T06:54:05.000Z",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/aaf64203dddc6c2097b4f2a37d1bc5372e58ab108a1366ab9b4e3ebdb7f92c86",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.13.0",
      "date": "2026-06-23T06:53:34.000Z",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/91fbae2469abf6518947d10611e6122787178c143bc2c77b3dc712237d813aad",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.13.0",
      "date": "2026-06-23T06:54:50.000Z",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/5e355d46e6cf335ffde9cd404afe28c7a0a1d147a519cbcf83956dd7d3df3950",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.13.0",
      "date": "2026-06-23T06:53:36.000Z",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/59e3d815a170004e8b51a3d1e9c87a920abebfd55d24069836d7ef9cfc80e5cb",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.13.0",
      "date": "2026-06-23T06:53:28.000Z",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/d509f5dfa45027934fba6e70d698eeffebef754c7283bf3afb9595d9ea46db80",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.13.0",
      "date": "2026-06-23T06:53:59.000Z",
      "commit": "e0dbabf908fd90541771a29bb136d12694e93069",
      "fileid": "https://r2.ropensci.org/55f25c5d6106e8b2670a33b63a1df66c8121d6a5822daac5d48017497fb2986f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007634202"
    }
  ]
}