{"Probe.Set.ID":"204913_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.32964.0","Target.Description":"Consensus includes gb:AI360875 /FEA=EST /DB_XREF=gi:4112496 /DB_XREF=est:qy01c03.x1 /CLONE=IMAGE:2010724 /UG=Hs.32964 SRY (sex determining region Y)-box 11 /FL=gb:NM_003108.1 gb:AB028641.1 gb:U23752.1","Representative.Public.ID":"AI360875","Archival.UniGene.Cluster":"Hs.32964","UniGene.ID":"Hs.432638","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:5750229-5758967 (+) // 93.17 // p25.2","Gene.Title":"SRY (sex determining region Y)-box 11","Gene.Symbol":"SOX11","Chromosomal.Location":"chr2p25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000176887","Entrez.Gene":"6664","SwissProt":"P35716","EC":"---","OMIM":"600898","RefSeq.Protein.ID":"NP_003099.1","RefSeq.Transcript.ID":"NM_003108","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 7399 // nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000910 // HMG1/2 (high mobility group) box // 2.9E-33","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003108(11)","Transcript.Assignments":"NM_003108 // Homo sapiens SRY (sex determining region Y)-box 11 (SOX11), mRNA. // refseq // 11 // --- /// ENST00000322002 // cdna:known-ccds chromosome:NCBI36:2:5750250:5758968:1 gene:ENSG00000176887 CCDS1654.1 // ensembl_transcript // 11 // --- /// ENST00000382047 // cdna:known chromosome:NCBI36:2:5750250:5758967:1 gene:ENSG00000176887 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4440"}
{"Probe.Set.ID":"204914_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.32964.0","Target.Description":"Consensus includes gb:AW157202 /FEA=EST /DB_XREF=gi:6228603 /DB_XREF=est:au92g06.x1 /CLONE=IMAGE:2783770 /UG=Hs.32964 SRY (sex determining region Y)-box 11 /FL=gb:NM_003108.1 gb:AB028641.1 gb:U23752.1","Representative.Public.ID":"AW157202","Archival.UniGene.Cluster":"Hs.32964","UniGene.ID":"Hs.432638","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:5750229-5758967 (+) // 93.17 // p25.2","Gene.Title":"SRY (sex determining region Y)-box 11","Gene.Symbol":"SOX11","Chromosomal.Location":"chr2p25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000176887","Entrez.Gene":"6664","SwissProt":"P35716","EC":"---","OMIM":"600898","RefSeq.Protein.ID":"NP_003099.1","RefSeq.Transcript.ID":"NM_003108","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 7399 // nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000910 // HMG1/2 (high mobility group) box // 2.9E-33","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003108(11)","Transcript.Assignments":"NM_003108 // Homo sapiens SRY (sex determining region Y)-box 11 (SOX11), mRNA. // refseq // 11 // --- /// ENST00000322002 // cdna:known-ccds chromosome:NCBI36:2:5750250:5758968:1 gene:ENSG00000176887 CCDS1654.1 // ensembl_transcript // 11 // --- /// ENST00000382047 // cdna:known chromosome:NCBI36:2:5750250:5758967:1 gene:ENSG00000176887 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4441"}
{"Probe.Set.ID":"204915_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6527111","Target.Description":"gb:AB028641.1 /DEF=Homo sapiens mRNA for SOX11, complete cds. /FEA=mRNA /GEN=sox11 /PROD=SOX11 /DB_XREF=gi:6527111 /UG=Hs.32964 SRY (sex determining region Y)-box 11 /FL=gb:NM_003108.1 gb:AB028641.1 gb:U23752.1","Representative.Public.ID":"AB028641","Archival.UniGene.Cluster":"Hs.32964","UniGene.ID":"Hs.432638","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:5750249-5758967 (+) // 93.22 // p25.2","Gene.Title":"SRY (sex determining region Y)-box 11","Gene.Symbol":"SOX11","Chromosomal.Location":"chr2p25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000176887","Entrez.Gene":"6664","SwissProt":"P35716","EC":"---","OMIM":"600898","RefSeq.Protein.ID":"NP_003099.1","RefSeq.Transcript.ID":"NM_003108","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 7399 // nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000910 // HMG1/2 (high mobility group) box // 2.9E-33","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003108(11)","Transcript.Assignments":"NM_003108 // Homo sapiens SRY (sex determining region Y)-box 11 (SOX11), mRNA. // refseq // 11 // --- /// ENST00000322002 // cdna:known-ccds chromosome:NCBI36:2:5750250:5758968:1 gene:ENSG00000176887 CCDS1654.1 // ensembl_transcript // 11 // --- /// ENST00000382047 // cdna:known chromosome:NCBI36:2:5750250:5758967:1 gene:ENSG00000176887 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4442"}
{"Probe.Set.ID":"204466_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.76930.1","Target.Description":"Consensus includes gb:BG260394 /FEA=EST /DB_XREF=gi:12770210 /DB_XREF=est:602371523F1 /CLONE=IMAGE:4479556 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L08850.1 gb:NM_000345.2","Representative.Public.ID":"BG260394","Archival.UniGene.Cluster":"--- /// Hs.76930","UniGene.ID":"Hs.271771","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:90865334-90977373 (-) // 79.69 // q22.1","Gene.Title":"synuclein, alpha (non A4 component of amyloid precursor) /// synuclein, alpha (non A4 component of amyloid precursor)","Gene.Symbol":"SNCA","Chromosomal.Location":"chr4q21","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000145335","Entrez.Gene":"6622","SwissProt":"P37840","EC":"---","OMIM":"127750 /// 163890 /// 168601 /// 605543","RefSeq.Protein.ID":"NP_000336.1 /// NP_009292.1","RefSeq.Transcript.ID":"NM_000345 /// NM_007308","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6916 // anti-apoptosis // traceable author statement /// 7417 // central nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement /// 5737 // cytoplasm // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from physical interaction","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001058 // Synuclein // 1.2E-57 /// IPR001058 // Synuclein // 8.8E-57 /// IPR001058 // Synuclein // 3.5E-73","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC013293(11),CR602374(11),NM_000345(11),NM_007308(11)","Transcript.Assignments":"ENSESTT00000064031 // --- // ensembl_est // 11 // --- /// ENSESTT00000064032 // --- // ensembl_est // 11 // --- /// CR602374 // full-length cDNA clone CS0DN004YB02 of Adult brain of Homo sapiens (human). // gb // 11 // --- /// BC013293 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor), mRNA (cDNA clone MGC:3484 IMAGE:3604532), complete cds. // gb // 11 // --- /// NM_000345 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP140, mRNA. // refseq // 11 // --- /// NM_007308 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP112, mRNA. // refseq // 11 // --- /// ENST00000336904 // cdna:known-ccds chromosome:NCBI36:4:90866479:90978470:-1 gene:ENSG00000145335 CCDS3634.1 // ensembl_transcript // 11 // --- /// ENST00000345009 // cdna:novel chromosome:NCBI36:4:90866479:90978470:-1 gene:ENSG00000145335 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"3993"}
{"Probe.Set.ID":"204467_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6806896","Target.Description":"gb:NM_000345.2 /DEF=Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP140, mRNA.  /FEA=mRNA /GEN=SNCA /PROD=alpha-synuclein isoform NACP140 /DB_XREF=gi:6806896 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L08850.1 gb:NM_000345.2","Representative.Public.ID":"NM_000345","Archival.UniGene.Cluster":"--- /// Hs.76930","UniGene.ID":"Hs.271771","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:90865727-90975869 (-) // 83.08 // q22.1","Gene.Title":"synuclein, alpha (non A4 component of amyloid precursor) /// synuclein, alpha (non A4 component of amyloid precursor)","Gene.Symbol":"SNCA","Chromosomal.Location":"chr4q21","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"6622","SwissProt":"P37840","EC":"---","OMIM":"127750 /// 163890 /// 168601 /// 605543","RefSeq.Protein.ID":"NP_000336.1 /// NP_009292.1","RefSeq.Transcript.ID":"NM_000345 /// NM_007308","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6916 // anti-apoptosis // traceable author statement /// 7417 // central nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement /// 5737 // cytoplasm // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from physical interaction","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001058 // Synuclein // 3.5E-73","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000345(11)","Transcript.Assignments":"NM_000345 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP140, mRNA. // refseq // 11 // ---","Annotation.Notes":"---","_row":"3994"}
{"Probe.Set.ID":"207827_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g556213","Target.Description":"gb:L36675.1 /DEF=Human (clone 2-4) synuclein (NACP) mRNA, complete cds. /FEA=mRNA /GEN=NACP /PROD=synuclein /DB_XREF=gi:556213 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L36675.1 gb:D31839.1 gb:NM_007308.1","Representative.Public.ID":"L36675","Archival.UniGene.Cluster":"Hs.76930","UniGene.ID":"Hs.271771","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:90866789-90975859 (-) // 100.0 // q22.1","Gene.Title":"synuclein, alpha (non A4 component of amyloid precursor)","Gene.Symbol":"SNCA","Chromosomal.Location":"chr4q21","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000145335","Entrez.Gene":"6622","SwissProt":"P37840","EC":"---","OMIM":"127750 /// 163890 /// 168601 /// 605543","RefSeq.Protein.ID":"NP_000336.1 /// NP_009292.1","RefSeq.Transcript.ID":"NM_000345 /// NM_007308","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6916 // anti-apoptosis // traceable author statement /// 7417 // central nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement /// 5737 // cytoplasm // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from physical interaction","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR003961 // Fibronectin, type III // 7.3E-11 /// IPR001058 // Synuclein // 1.2E-57 /// IPR001058 // Synuclein // 3.5E-73","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC013293(11),CR602374(11),NM_000345(11),NM_007308(10)","Transcript.Assignments":"ENSESTT00000064031 // --- // ensembl_est // 11 // --- /// ENSESTT00000064032 // --- // ensembl_est // 11 // --- /// CR602374 // full-length cDNA clone CS0DN004YB02 of Adult brain of Homo sapiens (human). // gb // 11 // --- /// BC013293 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor), mRNA (cDNA clone MGC:3484 IMAGE:3604532), complete cds. // gb // 11 // --- /// NM_000345 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP140, mRNA. // refseq // 11 // --- /// NM_007308 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP112, mRNA. // refseq // 10 // --- /// GENSCAN00000051513 // cdna:Genscan chromosome:NCBI36:4:90953003:91001339:-1 // ensembl_prediction // 11 // --- /// ENST00000336904 // cdna:known-ccds chromosome:NCBI36:4:90866479:90978470:-1 gene:ENSG00000145335 CCDS3634.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENST00000345009 // ensembl_transcript // 8 // Cross Hyb Matching Probes","_row":"7346"}
{"Probe.Set.ID":"211546_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g556211","Target.Description":"gb:L36674.1 /DEF=Human (clone 2-5) synuclein (NACP) mRNA, complete cds. /FEA=mRNA /GEN=NACP /PROD=synuclein /DB_XREF=gi:556211 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L36674.1","Representative.Public.ID":"L36674","Archival.UniGene.Cluster":"Hs.76930","UniGene.ID":"Hs.271771","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:90866789-90975859 (-) // 100.0 // q22.1","Gene.Title":"synuclein, alpha (non A4 component of amyloid precursor)","Gene.Symbol":"SNCA","Chromosomal.Location":"chr4q21","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000145335","Entrez.Gene":"6622","SwissProt":"P37840","EC":"---","OMIM":"127750 /// 163890 /// 168601 /// 605543","RefSeq.Protein.ID":"NP_000336.1 /// NP_009292.1","RefSeq.Transcript.ID":"NM_000345 /// NM_007308","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6916 // anti-apoptosis // traceable author statement /// 7417 // central nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement /// 5737 // cytoplasm // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from physical interaction","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001058 // Synuclein // 1.2E-57 /// IPR001058 // Synuclein // 8.8E-57 /// IPR001058 // Synuclein // 3.5E-73","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC013293(11),CR602374(11),NM_000345(11)","Transcript.Assignments":"ENSESTT00000064031 // --- // ensembl_est // 11 // --- /// ENSESTT00000064032 // --- // ensembl_est // 11 // --- /// CR602374 // full-length cDNA clone CS0DN004YB02 of Adult brain of Homo sapiens (human). // gb // 11 // --- /// BC013293 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor), mRNA (cDNA clone MGC:3484 IMAGE:3604532), complete cds. // gb // 11 // --- /// NM_000345 // Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP140, mRNA. // refseq // 11 // --- /// ENST00000336904 // cdna:known-ccds chromosome:NCBI36:4:90866479:90978470:-1 gene:ENSG00000145335 CCDS3634.1 // ensembl_transcript // 11 // --- /// ENST00000345009 // cdna:novel chromosome:NCBI36:4:90866479:90978470:-1 gene:ENSG00000145335 // ensembl_transcript // 11 // ---","Annotation.Notes":"NM_007308 // refseq // 8 // Cross Hyb Matching Probes /// GENSCAN00000051513 // ensembl_prediction // 8 // Cross Hyb Matching Probes","_row":"10951"}
{"Probe.Set.ID":"215811_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.275706.0","Target.Description":"Consensus includes gb:AF238870.1 /DEF=Homo sapiens clone GLSH-3 similar to gliadin mRNA sequence. /FEA=mRNA /DB_XREF=gi:8272577 /UG=Hs.275706 Homo sapiens clone GLSH-3 similar to gliadin mRNA sequence","Representative.Public.ID":"AF238870","Archival.UniGene.Cluster":"Hs.275706","UniGene.ID":"Hs.271771","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:90931538-90934222 (-) // 49.78 // q22.1","Gene.Title":"Synuclein, alpha (non A4 component of amyloid precursor)","Gene.Symbol":"SNCA","Chromosomal.Location":"chr4q21","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"6622","SwissProt":"P37840","EC":"---","OMIM":"127750 /// 163890 /// 168601 /// 605543","RefSeq.Protein.ID":"NP_000336.1 /// NP_009292.1","RefSeq.Transcript.ID":"NM_000345 /// NM_007308","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6916 // anti-apoptosis // traceable author statement /// 7417 // central nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement /// 5737 // cytoplasm // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from physical interaction","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 2 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AF238870,AA682426","Transcript.Assignments":"AA682426 // /DB_XREF=zj98f12.s1 /CLONE=IMAGE:462959 // gb // --- // --- /// AF238870 // /DEF=Homo sapiens clone GLSH-3 similar to gliadin mRNA sequence. // gb // --- // ---","Annotation.Notes":"---","_row":"15184"}
{"Probe.Set.ID":"210016_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.172619.0","Target.Description":"Consensus includes gb:BF223003 /FEA=EST /DB_XREF=gi:11130180 /DB_XREF=est:7q27c10.x1 /CLONE=IMAGE:3699474 /UG=Hs.172619 KIAA1106 protein /FL=gb:AF036943.1","Representative.Public.ID":"BF223003","Archival.UniGene.Cluster":"Hs.172619","UniGene.ID":"Hs.434418","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:1771893-2314058 (-) // 92.31 // p25.3","Gene.Title":"myelin transcription factor 1-like","Gene.Symbol":"MYT1L","Chromosomal.Location":"chr2p25.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000186487","Entrez.Gene":"23040","SwissProt":"Q49A74 /// Q9UL68","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_055840.2","RefSeq.Transcript.ID":"NM_015025","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 7399 // nervous system development // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002515 // Zn-finger, C2HC type // 7.9E-17 /// IPR002515 // Zn-finger, C2HC type // 5.0E-15 /// IPR002515 // Zn-finger, C2HC type // 1.8E-16 /// IPR002515 // Zn-finger, C2HC type // 1.8E-18 /// IPR002515 // Zn-finger, C2HC type // 8.0E-17 /// IPR002515 // Zn-finger, C2HC type // 4.8E-16 /// IPR002515 // Zn-finger, C2HC type // 6.5E-16 /// IPR002515 // Zn-finger, C2HC type // 5.0E-15 /// IPR002515 // Zn-finger, C2HC type // 1.8E-16 /// IPR002515 // Zn-finger, C2HC type // 1.8E-18 /// IPR002515 // Zn-finger, C2HC type // 8.0E-17 /// IPR002515 // Zn-finger, C2HC type // 4.8E-16","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC071612(9),NM_015025(11)","Transcript.Assignments":"BC071612 // Homo sapiens myelin transcription factor 1-like, mRNA (cDNA clone IMAGE:5273662), complete cds. // gb // 9 // --- /// NM_015025 // Homo sapiens myelin transcription factor 1-like (MYT1L), mRNA. // refseq // 11 // --- /// ENST00000295067 // cdna:known chromosome:NCBI36:2:1771894:2314052:-1 gene:ENSG00000186487 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9501"}
{"Probe.Set.ID":"216672_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.306442.0","Target.Description":"Consensus includes gb:AL133024.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434E0922 (from clone DKFZp434E0922). /FEA=mRNA /DB_XREF=gi:6453581 /UG=Hs.306442 Homo sapiens mRNA; cDNA DKFZp434E0922 (from clone DKFZp434E0922)","Representative.Public.ID":"AL133024","Archival.UniGene.Cluster":"Hs.306442","UniGene.ID":"Hs.434418","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:1866656-1905509 (-) // 92.49 // p25.3","Gene.Title":"myelin transcription factor 1-like","Gene.Symbol":"MYT1L","Chromosomal.Location":"chr2p25.3","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"23040","SwissProt":"Q49A74 /// Q9UL68","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_055840.2","RefSeq.Transcript.ID":"NM_015025","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 7399 // nervous system development // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL133024(11)","Transcript.Assignments":"AL133024 // Homo sapiens mRNA; cDNA DKFZp434E0922 (from clone DKFZp434E0922). // gb // 11 // ---","Annotation.Notes":"---","_row":"16042"}
{"Probe.Set.ID":"207957_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4506068","Target.Description":"gb:NM_002738.1 /DEF=Homo sapiens protein kinase C, beta 1 (PRKCB1), mRNA. /FEA=mRNA /GEN=PRKCB1 /PROD=protein kinase C, beta 1 /DB_XREF=gi:4506068 /UG=Hs.77202 protein kinase C, beta 1 /FL=gb:NM_002738.1","Representative.Public.ID":"NM_002738","Archival.UniGene.Cluster":"Hs.77202","UniGene.ID":"Hs.460355","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr16:23754860-24139351 (+) // 95.49 // p12.1","Gene.Title":"Protein kinase C, beta 1","Gene.Symbol":"PRKCB1","Chromosomal.Location":"chr16p11.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000166501","Entrez.Gene":"5579","SwissProt":"P05771 /// Q6ZRB8","EC":"EC:2.7.1.37","OMIM":"176970","RefSeq.Protein.ID":"NP_002729.2 /// NP_997700.1","RefSeq.Transcript.ID":"NM_002738 /// NM_212535","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6468 // protein amino acid phosphorylation // traceable author statement /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement /// 5886 // plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4697 // protein kinase C activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"hanks // 1.2.1 // AGC group; AGC I Diacylglycerol-activated/phospholipid-dependent protein kinase C (PKC) family; PKCa // 1.0E-141","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 4.2E-75 /// IPR000961 // Protein kinase C-terminal domain // 8.8E-44 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 2.3E-22 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.6E-27 /// IPR000008 // C2 domain // 1.8E-36","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL833252(11)","Transcript.Assignments":"ENSESTT00000082344 // --- // ensembl_est // 11 // --- /// AL833252 // Homo sapiens mRNA; cDNA DKFZp761J0720 (from clone DKFZp761J0720). // gb // 11 // --- /// ENST00000321728 // cdna:known-ccds chromosome:NCBI36:16:23754861:24139358:1 gene:ENSG00000166501 CCDS10618.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"NM_212535 // refseq // 7 // Cross Hyb Matching Probes","_row":"7470"}
{"Probe.Set.ID":"209685_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g189968","Target.Description":"gb:M13975.1 /DEF=Homo sapiens protein kinase C beta-II type (PRKCB1) mRNA, complete cds.  /FEA=mRNA /GEN=PRKCB1 /PROD=protein kinase C beta-II type /DB_XREF=gi:189968 /UG=Hs.77202 protein kinase C, beta 1 /FL=gb:M13975.1","Representative.Public.ID":"M13975","Archival.UniGene.Cluster":"Hs.77202","UniGene.ID":"Hs.460355","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr16:23754933-24134469 (+) // 97.02 // p12.1","Gene.Title":"protein kinase C, beta 1","Gene.Symbol":"PRKCB1","Chromosomal.Location":"chr16p11.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000166501","Entrez.Gene":"5579","SwissProt":"P05771 /// Q6ZRB8","EC":"EC:2.7.1.37","OMIM":"176970","RefSeq.Protein.ID":"NP_002729.2 /// NP_997700.1","RefSeq.Transcript.ID":"NM_002738 /// NM_212535","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6468 // protein amino acid phosphorylation // traceable author statement /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement /// 5886 // plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4697 // protein kinase C activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"hanks // 1.2.1 // AGC group; AGC I Diacylglycerol-activated/phospholipid-dependent protein kinase C (PKC) family; PKCa // 1.0E-141","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 4.2E-75 /// IPR000961 // Protein kinase C-terminal domain // 3.8E-42 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 2.3E-22 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.6E-27 /// IPR000008 // C2 domain // 1.8E-36","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002738(11)","Transcript.Assignments":"NM_002738 // Homo sapiens protein kinase C, beta 1 (PRKCB1), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000303531 // cdna:known-ccds chromosome:NCBI36:16:23754823:24134803:1 gene:ENSG00000166501 CCDS10619.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9173"}
{"Probe.Set.ID":"204280_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5454005","Target.Description":"gb:NM_006480.1 /DEF=Homo sapiens regulator of G-protein signalling 14 (RGS14), mRNA. /FEA=mRNA /GEN=RGS14 /PROD=regulator of G-protein signalling 14 /DB_XREF=gi:5454005 /UG=Hs.9347 regulator of G-protein signalling 14 /FL=gb:AF037195.1 gb:NM_006480.1","Representative.Public.ID":"NM_006480","Archival.UniGene.Cluster":"Hs.9347","UniGene.ID":"Hs.9347","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:176726549-176731905 (+) // 99.61 // q35.3","Gene.Title":"regulator of G-protein signalling 14","Gene.Symbol":"RGS14","Chromosomal.Location":"chr5q35.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000169220","Entrez.Gene":"10636","SwissProt":"O43566 /// Q506M1 /// Q6ZWA4","EC":"---","OMIM":"602513","RefSeq.Protein.ID":"NP_006471.2","RefSeq.Transcript.ID":"NM_006480","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // inferred from electronic annotation /// 8277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 9968 // negative regulation of signal transduction // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5057 // receptor signaling protein activity // inferred from electronic annotation /// 5096 // GTPase activator activity // inferred from electronic annotation /// 5096 // GTPase activator activity // traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation","Pathway":"Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000342 // Regulator of G protein // 5.0E-30 /// IPR003116 // Raf-like Ras-binding // 4.0E-28 /// IPR003116 // Raf-like Ras-binding // 1.1E-25 /// IPR003109 // GoLoco // 2.0E-9 /// IPR003116 // Raf-like Ras-binding // 3.0E-24 /// IPR003116 // Raf-like Ras-binding // 1.1E-25 /// IPR003109 // GoLoco // 2.0E-9","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK098150(11),NM_006480(11)","Transcript.Assignments":"AK098150 // Homo sapiens cDNA FLJ40831 fis, clone TRACH2012138, highly similar to REGULATOR OF G-PROTEIN SIGNALING 14. // gb // 11 // --- /// NM_006480 // Homo sapiens regulator of G-protein signalling 14 (RGS14), mRNA. // refseq // 11 // --- /// ENST00000351955 // cdna:known chromosome:NCBI36:5:176717450:176732204:1 gene:ENSG00000169220 // ensembl_transcript // 11 // --- /// ENST00000336477 // cdna:known chromosome:NCBI36:5:176717450:176732203:1 gene:ENSG00000169220 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000048123 // ensembl_est // 4 // Cross Hyb Matching Probes /// ENSESTT00000048124 // ensembl_est // 4 // Cross Hyb Matching Probes /// GENSCAN00000021444 // ensembl_prediction // 8 // Cross Hyb Matching Probes","_row":"3807"}
{"Probe.Set.ID":"211021_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g2708807","Target.Description":"gb:AF037194.1 /DEF=Homo sapiens regulator of G protein signaling RGS14-variant, mRNA, complete cds.  /FEA=mRNA /PROD=regulator of G protein signaling RGS14-variant /DB_XREF=gi:2708807 /UG=Hs.9347 regulator of G-protein signalling 14 /FL=gb:AF037194.1","Representative.Public.ID":"AF037194","Archival.UniGene.Cluster":"Hs.9347","UniGene.ID":"Hs.9347","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:176726549-176728682 (+) // 87.23 // q35.3","Gene.Title":"regulator of G-protein signalling 14","Gene.Symbol":"RGS14","Chromosomal.Location":"chr5q35.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000169220","Entrez.Gene":"10636","SwissProt":"O43566 /// Q506M1 /// Q6ZWA4","EC":"---","OMIM":"602513","RefSeq.Protein.ID":"NP_006471.2","RefSeq.Transcript.ID":"NM_006480","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // inferred from electronic annotation /// 8277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 9968 // negative regulation of signal transduction // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5057 // receptor signaling protein activity // inferred from electronic annotation /// 5096 // GTPase activator activity // inferred from electronic annotation /// 5096 // GTPase activator activity // traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation","Pathway":"Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000276 // Rhodopsin-like GPCR superfamily // 2.3E-99 /// IPR000342 // Regulator of G protein // 5.0E-30 /// IPR003116 // Raf-like Ras-binding // 4.0E-28 /// IPR003116 // Raf-like Ras-binding // 1.1E-25 /// IPR003109 // GoLoco // 2.0E-9 /// IPR003116 // Raf-like Ras-binding // 6.2E-17","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF037194(11),AK098150(11),NM_006480(11)","Transcript.Assignments":"ENSESTT00000048121 // --- // ensembl_est // 11 // --- /// ENSESTT00000048122 // --- // ensembl_est // 9 // --- /// AF037194 // Homo sapiens regulator of G protein signaling RGS14-variant, mRNA, complete cds. // gb // 11 // --- /// AK098150 // Homo sapiens cDNA FLJ40831 fis, clone TRACH2012138, highly similar to REGULATOR OF G-PROTEIN SIGNALING 14. // gb // 11 // --- /// NM_006480 // Homo sapiens regulator of G-protein signalling 14 (RGS14), mRNA. // refseq // 11 // --- /// GENSCAN00000021444 // cdna:Genscan chromosome:NCBI36:5:176717632:176731682:1 // ensembl_prediction // 11 // --- /// ENST00000351955 // cdna:known chromosome:NCBI36:5:176717450:176732204:1 gene:ENSG00000169220 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000048120 // ensembl_est // 1 // Cross Hyb Matching Probes /// XM_936339 // refseq // 1 // Cross Hyb Matching Probes /// ENST00000336477 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// BC026291 // gb // 1 // Negative Strand Matching Probes /// NM_144585 // refseq // 1 // Negative Strand Matching Probes /// NM_153378 // refseq // 1 // Negative Strand Matching Probes /// ENST00000377574 // ensembl_transcript // 1 // Negative Strand Matching Probes /// ENST00000336464 // ensembl_transcript // 1 // Negative Strand Matching Probes /// ENST00000356210 // ensembl_transcript // 1 // Negative Strand Matching Probes /// ENST00000301893 // ensembl_transcript // 1 // Negative Strand Matching Probes","_row":"10467"}
{"Probe.Set.ID":"38290_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"4877400_RC","Target.Description":" Cluster Incl. AF037195:Homo sapiens regulator of G protein signaling RGS14 mRNA, complete cds /cds=(73,1398) /gb=AF037195 /gi=2708809 /ug=Hs.9347 /len=1531 ","Representative.Public.ID":"AF037195","Archival.UniGene.Cluster":"Hs.9347","UniGene.ID":"Hs.9347","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:176726572-176732203 (+) // 92.15 // q35.3","Gene.Title":"regulator of G-protein signalling 14","Gene.Symbol":"RGS14","Chromosomal.Location":"chr5q35.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000169220","Entrez.Gene":"10636","SwissProt":"O43566 /// Q506M1 /// Q6ZWA4","EC":"---","OMIM":"602513","RefSeq.Protein.ID":"NP_006471.2","RefSeq.Transcript.ID":"NM_006480","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // inferred from electronic annotation /// 8277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 9968 // negative regulation of signal transduction // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5057 // receptor signaling protein activity // inferred from electronic annotation /// 5096 // GTPase activator activity // inferred from electronic annotation /// 5096 // GTPase activator activity // traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation","Pathway":"Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000342 // Regulator of G protein // 5.0E-30 /// IPR003116 // Raf-like Ras-binding // 4.0E-28 /// IPR003116 // Raf-like Ras-binding // 1.1E-25 /// IPR003109 // GoLoco // 2.0E-9 /// IPR003116 // Raf-like Ras-binding // 3.0E-24 /// IPR003116 // Raf-like Ras-binding // 1.1E-25 /// IPR003109 // GoLoco // 2.0E-9","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK098150(16),NM_006480(16)","Transcript.Assignments":"AK098150 // Homo sapiens cDNA FLJ40831 fis, clone TRACH2012138, highly similar to REGULATOR OF G-PROTEIN SIGNALING 14. // gb // 16 // --- /// NM_006480 // Homo sapiens regulator of G-protein signalling 14 (RGS14), mRNA. // refseq // 16 // --- /// ENST00000351955 // cdna:known chromosome:NCBI36:5:176717450:176732204:1 gene:ENSG00000169220 // ensembl_transcript // 16 // --- /// ENST00000336477 // cdna:known chromosome:NCBI36:5:176717450:176732203:1 gene:ENSG00000169220 // ensembl_transcript // 16 // ---","Annotation.Notes":"---","_row":"21913"}
{"Probe.Set.ID":"207172_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4502716","Target.Description":"gb:NM_001797.1 /DEF=Homo sapiens cadherin 11, type 2, OB-cadherin (osteoblast) (CDH11), mRNA.  /FEA=mRNA /GEN=CDH11 /PROD=cadherin 11, type 2, OB-cadherin (osteoblast) /DB_XREF=gi:4502716 /UG=Hs.75929 cadherin 11, type 2, OB-cadherin (osteoblast) /FL=gb:NM_001797.1 gb:L34056.1 gb:D21254.1","Representative.Public.ID":"NM_001797","Archival.UniGene.Cluster":"Hs.75929","UniGene.ID":"Hs.116471","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr16:63538926-63596427 (-) // 99.89 // q21","Gene.Title":"cadherin 11, type 2, OB-cadherin (osteoblast)","Gene.Symbol":"CDH11","Chromosomal.Location":"chr16q22.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000140937","Entrez.Gene":"1009","SwissProt":"P55287 /// Q59EQ1 /// Q96CZ9","EC":"---","OMIM":"600023","RefSeq.Protein.ID":"NP_001788.2","RefSeq.Transcript.ID":"NM_001797","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1503 // ossification // non-traceable author statement /// 7155 // cell adhesion // inferred from electronic annotation /// 7156 // homophilic cell adhesion // inferred from electronic annotation /// 7156 // homophilic cell adhesion // non-traceable author statement /// 1501 // skeletal development // traceable author statement /// 7155 // cell adhesion // traceable author statement /// 16337 // cell-cell adhesion // non-traceable author statement","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 16021 // integral to membrane // non-traceable author statement","Gene.Ontology.Molecular.Function":"5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002126 // Cadherin // 9.2E-11 /// IPR002126 // Cadherin // 3.3E-26 /// IPR002126 // Cadherin // 8.4E-19 /// IPR002126 // Cadherin // 4.7E-20 /// IPR002126 // Cadherin // 1.2E-6 /// IPR000233 // Cadherin cytoplasmic region // 4.0E-102","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001797(11)","Transcript.Assignments":"NM_001797 // Homo sapiens cadherin 11, type 2, OB-cadherin (osteoblast) (CDH11), mRNA. // refseq // 11 // --- /// GENSCAN00000049842 // cdna:Genscan chromosome:NCBI36:16:63539007:63596273:-1 // ensembl_prediction // 10 // --- /// ENST00000268602 // cdna:novel chromosome:NCBI36:16:63538186:63713431:-1 gene:ENSG00000140937 // ensembl_transcript // 11 // --- /// ENST00000268603 // cdna:known-ccds chromosome:NCBI36:16:63538186:63713431:-1 gene:ENSG00000140937 CCDS10803.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000042987 // ensembl_est // 1 // Cross Hyb Matching Probes /// ENSESTT00000042988 // ensembl_est // 8 // Cross Hyb Matching Probes","_row":"6697"}
{"Probe.Set.ID":"207173_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g575577","Target.Description":"gb:D21254.1 /DEF=Human mRNA for OB-cadherin-1, complete cds. /FEA=mRNA /GEN=osf-4 /PROD=OB-cadherin-1 /DB_XREF=gi:575577 /UG=Hs.75929 cadherin 11, type 2, OB-cadherin (osteoblast) /FL=gb:NM_001797.1 gb:L34056.1 gb:D21254.1","Representative.Public.ID":"D21254","Archival.UniGene.Cluster":"Hs.75929","UniGene.ID":"Hs.116471","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr16:63538185-63713428 (-) // 99.67 // q21","Gene.Title":"cadherin 11, type 2, OB-cadherin (osteoblast)","Gene.Symbol":"CDH11","Chromosomal.Location":"chr16q22.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000140937","Entrez.Gene":"1009","SwissProt":"P55287 /// Q59EQ1 /// Q96CZ9","EC":"---","OMIM":"600023","RefSeq.Protein.ID":"NP_001788.2","RefSeq.Transcript.ID":"NM_001797","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1503 // ossification // non-traceable author statement /// 7155 // cell adhesion // inferred from electronic annotation /// 7156 // homophilic cell adhesion // inferred from electronic annotation /// 7156 // homophilic cell adhesion // non-traceable author statement /// 1501 // skeletal development // traceable author statement /// 7155 // cell adhesion // traceable author statement /// 16337 // cell-cell adhesion // non-traceable author statement","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 16021 // integral to membrane // non-traceable author statement","Gene.Ontology.Molecular.Function":"5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002126 // Cadherin // 9.2E-11 /// IPR002126 // Cadherin // 3.3E-26 /// IPR002126 // Cadherin // 8.4E-19 /// IPR002126 // Cadherin // 4.7E-20 /// IPR002126 // Cadherin // 1.2E-6 /// IPR000233 // Cadherin cytoplasmic region // 4.0E-102","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001797(11)","Transcript.Assignments":"NM_001797 // Homo sapiens cadherin 11, type 2, OB-cadherin (osteoblast) (CDH11), mRNA. // refseq // 11 // --- /// ENST00000268602 // cdna:novel chromosome:NCBI36:16:63538186:63713431:-1 gene:ENSG00000140937 // ensembl_transcript // 11 // --- /// ENST00000268603 // cdna:known-ccds chromosome:NCBI36:16:63538186:63713431:-1 gene:ENSG00000140937 CCDS10803.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"6698"}
{"Probe.Set.ID":"209108_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g2995860","Target.Description":"gb:AF053453.1 /DEF=Homo sapiens tetraspan TM4SF (TSPAN-6) mRNA, complete cds. /FEA=mRNA /GEN=TSPAN-6 /PROD=tetraspan TM4SF /DB_XREF=gi:2995860 /UG=Hs.121068 transmembrane 4 superfamily member 6 /FL=gb:AF043906.1 gb:AF053453.1 gb:U84895.1 gb:NM_003270.1 gb:AF133426.1","Representative.Public.ID":"AF053453","Archival.UniGene.Cluster":"Hs.121068","UniGene.ID":"Hs.43233","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:99770682-99778357 (-) // 98.14 // q22.1","Gene.Title":"tetraspanin 6","Gene.Symbol":"TSPAN6","Chromosomal.Location":"chrXq22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000000003","Entrez.Gene":"7105","SwissProt":"O43657 /// Q54A42 /// Q59ED5 /// Q6IAN9","EC":"---","OMIM":"300191","RefSeq.Protein.ID":"NP_003261.1","RefSeq.Transcript.ID":"NM_003270","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6928 // cell motility // not recorded /// 43123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 16021 // integral to membrane // not recorded","Gene.Ontology.Molecular.Function":"4871 // signal transducer activity // inferred from mutant phenotype","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000301 // CD9/CD37/CD63 antigen // 2.6E-75","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003270(11)","Transcript.Assignments":"NM_003270 // Homo sapiens tetraspanin 6 (TSPAN6), mRNA. // refseq // 11 // --- /// ENST00000373020 // cdna:known-ccds chromosome:NCBI36:X:99770323:99778459:-1 gene:ENSG00000000003 CCDS14470.1 // ensembl_transcript // 11 // --- /// ENST00000003603 // cdna:known chromosome:NCBI36:X:99770375:99778469:-1 gene:ENSG00000000003 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"8602"}
{"Probe.Set.ID":"209109_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4099210","Target.Description":"gb:U84895.1 /DEF=Human transmembrane 4 superfamily A15 homolog mRNA, complete cds. /FEA=mRNA /PROD=A15 homolog /DB_XREF=gi:4099210 /UG=Hs.121068 transmembrane 4 superfamily member 6 /FL=gb:AF043906.1 gb:AF053453.1 gb:U84895.1 gb:NM_003270.1 gb:AF133426.1","Representative.Public.ID":"U84895","Archival.UniGene.Cluster":"Hs.121068","UniGene.ID":"Hs.43233","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:99771378-99778414 (-) // 99.82 // q22.1","Gene.Title":"tetraspanin 6","Gene.Symbol":"TSPAN6","Chromosomal.Location":"chrXq22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000000003","Entrez.Gene":"7105","SwissProt":"O43657 /// Q54A42 /// Q59ED5 /// Q6IAN9","EC":"---","OMIM":"300191","RefSeq.Protein.ID":"NP_003261.1","RefSeq.Transcript.ID":"NM_003270","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6928 // cell motility // not recorded /// 43123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 16021 // integral to membrane // not recorded","Gene.Ontology.Molecular.Function":"4871 // signal transducer activity // inferred from mutant phenotype","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000301 // CD9/CD37/CD63 antigen // 2.6E-75","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003270(11)","Transcript.Assignments":"ENSESTT00000063634 // --- // ensembl_est // 11 // --- /// ENSESTT00000063635 // --- // ensembl_est // 11 // --- /// NM_003270 // Homo sapiens tetraspanin 6 (TSPAN6), mRNA. // refseq // 11 // --- /// ENST00000373020 // cdna:known-ccds chromosome:NCBI36:X:99770323:99778459:-1 gene:ENSG00000000003 CCDS14470.1 // ensembl_transcript // 11 // --- /// ENST00000003603 // cdna:known chromosome:NCBI36:X:99770375:99778469:-1 gene:ENSG00000000003 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000063022 // ensembl_prediction // 5 // Cross Hyb Matching Probes","_row":"8603"}
{"Probe.Set.ID":"209301_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g179794","Target.Description":"gb:M36532.1 /DEF=Human carbonic anhydrase II mRNA, complete cds. /FEA=mRNA /GEN=CA2 /DB_XREF=gi:179794 /UG=Hs.155097 carbonic anhydrase II /FL=gb:J03037.1 gb:M36532.1 gb:NM_000067.1","Representative.Public.ID":"M36532","Archival.UniGene.Cluster":"Hs.155097","UniGene.ID":"Hs.155097","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr8:86563521-86580806 (+) // 96.7 // q21.2","Gene.Title":"carbonic anhydrase II","Gene.Symbol":"CA2","Chromosomal.Location":"chr8q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000104267","Entrez.Gene":"760","SwissProt":"P00918 /// Q6LD99","EC":"EC:4.2.1.1","OMIM":"259730","RefSeq.Protein.ID":"NP_000058.1","RefSeq.Transcript.ID":"NM_000067","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6730 // one-carbon compound metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // not recorded","Gene.Ontology.Molecular.Function":"4089 // carbonate dehydratase activity // traceable author statement /// 8270 // zinc ion binding // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4089 // carbonate dehydratase activity // inferred from electronic annotation","Pathway":"Nitrogen metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001148 // Carbonic anhydrase, eukaryotic // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC011949(11),NM_000067(11)","Transcript.Assignments":"ENSESTT00000075967 // --- // ensembl_est // 11 // --- /// ENSESTT00000075968 // --- // ensembl_est // 11 // --- /// AK123309 // Homo sapiens cDNA FLJ41315 fis, clone BRAMY2043069. // gb // 11 // --- /// BC011949 // Homo sapiens carbonic anhydrase II, mRNA (cDNA clone MGC:9006 IMAGE:3863603), complete cds. // gb // 11 // --- /// NM_000067 // Homo sapiens carbonic anhydrase II (CA2), mRNA. // refseq // 11 // --- /// ENST00000285379 // cdna:known-ccds chromosome:NCBI36:8:86563433:86580945:1 gene:ENSG00000104267 CCDS6239.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"8795"}
{"Probe.Set.ID":"202599_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4505454","Target.Description":"gb:NM_003489.1 /DEF=Homo sapiens nuclear receptor interacting protein 1 (NRIP1), mRNA. /FEA=mRNA /GEN=NRIP1 /PROD=receptor interacting protein 140 /DB_XREF=gi:4505454 /UG=Hs.155017 nuclear receptor interacting protein 1 /FL=gb:NM_003489.1","Representative.Public.ID":"NM_003489","Archival.UniGene.Cluster":"Hs.155017","UniGene.ID":"Hs.155017","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr21:15255432-15262670 (-) // 96.45 // q11.2","Gene.Title":"nuclear receptor interacting protein 1","Gene.Symbol":"NRIP1","Chromosomal.Location":"chr21q11.2","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"8204","SwissProt":"P48552 /// Q9H386","EC":"---","OMIM":"602490","RefSeq.Protein.ID":"NP_003480.2","RefSeq.Transcript.ID":"NM_003489","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 6350 // transcription // inferred from electronic annotation /// 30521 // androgen receptor signaling pathway // non-traceable author statement /// 45944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 45893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from direct assay /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3713 // transcription coactivator activity // inferred from direct assay /// 3713 // transcription coactivator activity // non-traceable author statement /// 3714 // transcription corepressor activity // inferred from direct assay /// 5515 // protein binding // inferred from physical interaction /// 30331 // estrogen receptor binding // inferred from physical interaction /// 35257 // nuclear hormone receptor binding // inferred from physical interaction /// 35259 // glucocorticoid receptor binding // inferred from physical interaction /// 50681 // androgen receptor binding // non-traceable author statement","Pathway":"Ovarian_Infertility_Genes // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003489(11)","Transcript.Assignments":"NM_003489 // Homo sapiens nuclear receptor interacting protein 1 (NRIP1), mRNA. // refseq // 11 // ---","Annotation.Notes":"---","_row":"2127"}
{"Probe.Set.ID":"202600_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.155017.0","Target.Description":"Consensus includes gb:AI824012 /FEA=EST /DB_XREF=gi:5444683 /DB_XREF=est:wj29e06.x1 /CLONE=IMAGE:2404258 /UG=Hs.155017 nuclear receptor interacting protein 1 /FL=gb:NM_003489.1","Representative.Public.ID":"AI824012","Archival.UniGene.Cluster":"Hs.155017","UniGene.ID":"Hs.155017","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr21:15255431-15359126 (-) // 96.06 // q11.2","Gene.Title":"nuclear receptor interacting protein 1","Gene.Symbol":"NRIP1","Chromosomal.Location":"chr21q11.2","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"8204","SwissProt":"P48552 /// Q9H386","EC":"---","OMIM":"602490","RefSeq.Protein.ID":"NP_003480.2","RefSeq.Transcript.ID":"NM_003489","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 6350 // transcription // inferred from electronic annotation /// 30521 // androgen receptor signaling pathway // non-traceable author statement /// 45944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 45893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from direct assay /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3713 // transcription coactivator activity // inferred from direct assay /// 3713 // transcription coactivator activity // non-traceable author statement /// 3714 // transcription corepressor activity // inferred from direct assay /// 5515 // protein binding // inferred from physical interaction /// 30331 // estrogen receptor binding // inferred from physical interaction /// 35257 // nuclear hormone receptor binding // inferred from physical interaction /// 35259 // glucocorticoid receptor binding // inferred from physical interaction /// 50681 // androgen receptor binding // non-traceable author statement","Pathway":"Ovarian_Infertility_Genes // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003489(11)","Transcript.Assignments":"NM_003489 // Homo sapiens nuclear receptor interacting protein 1 (NRIP1), mRNA. // refseq // 11 // ---","Annotation.Notes":"GENSCAN00000032330 // ensembl_prediction // 1 // Cross Hyb Matching Probes /// ENST00000318948 // ensembl_transcript // 1 // Cross Hyb Matching Probes","_row":"2128"}
{"Probe.Set.ID":"218059_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7705816","Target.Description":"gb:NM_016096.1 /DEF=Homo sapiens HSPC038 protein (LOC51123), mRNA. /FEA=mRNA /GEN=LOC51123 /PROD=HSPC038 protein /DB_XREF=gi:7705816 /UG=Hs.23528 HSPC038 protein /FL=gb:AF275802.1 gb:AF275809.1 gb:AF125099.1 gb:NM_016096.1","Representative.Public.ID":"NM_016096","Archival.UniGene.Cluster":"Hs.23528","UniGene.ID":"Hs.374485","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:222429485-222430163 (-) // 92.63 // q42.11 /// chr8:102280332-102286974 (-) // 95.83 // q22.3","Gene.Title":"zinc finger protein 706","Gene.Symbol":"ZNF706","Chromosomal.Location":"chr8q22.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000120963","Entrez.Gene":"51123","SwissProt":"Q9HB72 /// Q9Y5V0","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057180.1","RefSeq.Transcript.ID":"NM_016096","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3676 // nucleic acid binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF275809(10),BC015925(10),BC035233(9),NM_016096(10)","Transcript.Assignments":"ENSESTT00000091510 // --- // ensembl_est // 9 // --- /// ENSESTT00000091511 // --- // ensembl_est // 9 // --- /// BC035233 // Homo sapiens zinc finger protein 706, mRNA (cDNA clone IMAGE:4822271), with apparent retained intron. // gb // 9 // --- /// AF275809 // Homo sapiens PNAS-113 mRNA, complete cds. // gb // 10 // --- /// BC015925 // Homo sapiens zinc finger protein 706, mRNA (cDNA clone MGC:8728 IMAGE:3909510), complete cds. // gb // 10 // --- /// NM_016096 // Homo sapiens zinc finger protein 706 (ZNF706), mRNA. // refseq // 10 // --- /// ENST00000311212 // cdna:known-ccds chromosome:NCBI36:8:102278464:102287020:-1 gene:ENSG00000120963 CCDS6291.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000037847 // ensembl_prediction // 5 // Cross Hyb Matching Probes /// GENSCAN00000048251 // ensembl_prediction // 2 // Cross Hyb Matching Probes /// ENST00000305782 // ensembl_transcript // 4 // Cross Hyb Matching Probes","_row":"17424"}
{"Probe.Set.ID":"202191_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.226133.0","Target.Description":"Consensus includes gb:BE439987 /FEA=EST /DB_XREF=gi:9439470 /DB_XREF=est:HTM1-745F /UG=Hs.226133 growth arrest-specific 7 /FL=gb:AB007854.1 gb:NM_005890.1","Representative.Public.ID":"BE439987","Archival.UniGene.Cluster":"Hs.226133","UniGene.ID":"Hs.462214","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:9754650-9870303 (-) // 89.76 // p13.1","Gene.Title":"growth arrest-specific 7","Gene.Symbol":"GAS7","Chromosomal.Location":"chr17p13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000007237","Entrez.Gene":"8522","SwissProt":"O60861 /// Q29RX5 /// Q53Y77 /// Q59GS9 /// Q7Z571","EC":"---","OMIM":"603127","RefSeq.Protein.ID":"NP_003635.2 /// NP_958836.1 /// NP_958839.1","RefSeq.Transcript.ID":"NM_003644 /// NM_201432 /// NM_201433","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7050 // cell cycle arrest // traceable author statement /// 7399 // nervous system development // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001452 // SH3 // 3.1E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003644(11),NM_201432(11),NM_201433(11)","Transcript.Assignments":"NM_201432 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant b, mRNA. // refseq // 11 // --- /// NM_201433 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, mRNA. // refseq // 11 // --- /// NM_003644 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000323816 // cdna:known-ccds chromosome:NCBI36:17:9754651:10042593:-1 gene:ENSG00000007237 CCDS11152.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000058225 // ensembl_est // 1 // Cross Hyb Matching Probes /// ENSESTT00000058226 // ensembl_est // 1 // Cross Hyb Matching Probes /// BC040516 // gb // 1 // Cross Hyb Matching Probes /// ENST00000237247 // ensembl_transcript // 1 // Cross Hyb Matching Probes /// ENST00000371039 // ensembl_transcript // 1 // Cross Hyb Matching Probes","_row":"1719"}
{"Probe.Set.ID":"202192_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5360211","Target.Description":"gb:NM_005890.1 /DEF=Homo sapiens growth arrest-specific 7 (GAS7), transcript variant b, mRNA.  /FEA=mRNA /GEN=GAS7 /PROD=growth arrest-specific 7 isoform b /DB_XREF=gi:5360211 /UG=Hs.226133 growth arrest-specific 7 /FL=gb:AB007854.1 gb:NM_005890.1","Representative.Public.ID":"NM_005890","Archival.UniGene.Cluster":"Hs.226133","UniGene.ID":"Hs.462214","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:9754650-9870303 (-) // 90.07 // p13.1","Gene.Title":"growth arrest-specific 7","Gene.Symbol":"GAS7","Chromosomal.Location":"chr17p13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000007237","Entrez.Gene":"8522","SwissProt":"O60861 /// Q29RX5 /// Q53Y77 /// Q59GS9 /// Q7Z571","EC":"---","OMIM":"603127","RefSeq.Protein.ID":"NP_003635.2 /// NP_958836.1 /// NP_958839.1","RefSeq.Transcript.ID":"NM_003644 /// NM_201432 /// NM_201433","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7050 // cell cycle arrest // traceable author statement /// 7399 // nervous system development // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001452 // SH3 // 3.1E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003644(11),NM_201432(11),NM_201433(11)","Transcript.Assignments":"NM_201432 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant b, mRNA. // refseq // 11 // --- /// NM_201433 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, mRNA. // refseq // 11 // --- /// NM_003644 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000323816 // cdna:known-ccds chromosome:NCBI36:17:9754651:10042593:-1 gene:ENSG00000007237 CCDS11152.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"1720"}
{"Probe.Set.ID":"207704_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4503920","Target.Description":"gb:NM_003644.1 /DEF=Homo sapiens growth arrest-specific 7 (GAS7), transcript variant a, mRNA.  /FEA=mRNA /GEN=GAS7 /PROD=growth arrest-specific 7 isoform a /DB_XREF=gi:4503920 /UG=Hs.226133 growth arrest-specific 7 /FL=gb:NM_003644.1","Representative.Public.ID":"NM_003644","Archival.UniGene.Cluster":"Hs.226133","UniGene.ID":"Hs.462214","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:9760019-9803491 (-) // 98.89 // p13.1","Gene.Title":"growth arrest-specific 7","Gene.Symbol":"GAS7","Chromosomal.Location":"chr17p13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000007237","Entrez.Gene":"8522","SwissProt":"O60861 /// Q29RX5 /// Q53Y77 /// Q59GS9 /// Q7Z571","EC":"---","OMIM":"603127","RefSeq.Protein.ID":"NP_003635.2 /// NP_958836.1 /// NP_958839.1","RefSeq.Transcript.ID":"NM_003644 /// NM_201432 /// NM_201433","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7050 // cell cycle arrest // traceable author statement /// 7399 // nervous system development // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001452 // SH3 // 3.1E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AJ224876(11),NM_003644(11),NM_201432(11),NM_201433(11)","Transcript.Assignments":"AJ224876 // Homo sapiens mRNA for GAS7 protein. // gb // 11 // --- /// NM_201432 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant b, mRNA. // refseq // 11 // --- /// NM_201433 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, mRNA. // refseq // 11 // --- /// NM_003644 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000323816 // cdna:known-ccds chromosome:NCBI36:17:9754651:10042593:-1 gene:ENSG00000007237 CCDS11152.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"7225"}
{"Probe.Set.ID":"210872_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12654630","Target.Description":"gb:BC001152.1 /DEF=Homo sapiens, growth arrest-specific 7, clone MGC:1347, mRNA, complete cds.  /FEA=mRNA /PROD=growth arrest-specific 7 /DB_XREF=gi:12654630 /UG=Hs.226133 growth arrest-specific 7 /FL=gb:BC001152.1","Representative.Public.ID":"BC001152","Archival.UniGene.Cluster":"Hs.226133","UniGene.ID":"Hs.462214","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:9759133-10042386 (-) // 98.65 // p13.1","Gene.Title":"growth arrest-specific 7","Gene.Symbol":"GAS7","Chromosomal.Location":"chr17p13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000007237","Entrez.Gene":"8522","SwissProt":"O60861 /// Q29RX5 /// Q53Y77 /// Q59GS9 /// Q7Z571","EC":"---","OMIM":"603127","RefSeq.Protein.ID":"NP_003635.2 /// NP_958836.1 /// NP_958839.1","RefSeq.Transcript.ID":"NM_003644 /// NM_201432 /// NM_201433","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7050 // cell cycle arrest // traceable author statement /// 7399 // nervous system development // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001452 // SH3 // 3.1E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003644(11),NM_201432(11),NM_201433(11)","Transcript.Assignments":"NM_201432 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant b, mRNA. // refseq // 11 // --- /// NM_201433 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, mRNA. // refseq // 11 // --- /// NM_003644 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000323816 // cdna:known-ccds chromosome:NCBI36:17:9754651:10042593:-1 gene:ENSG00000007237 CCDS11152.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"10327"}
{"Probe.Set.ID":"211067_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13623656","Target.Description":"gb:BC006454.1 /DEF=Homo sapiens, growth arrest-specific 7, clone MGC:1348, mRNA, complete cds.  /FEA=mRNA /PROD=growth arrest-specific 7 /DB_XREF=gi:13623656 /FL=gb:BC006454.1","Representative.Public.ID":"BC006454","Archival.UniGene.Cluster":"--- /// Hs.901088","UniGene.ID":"Hs.462214","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:9759294-9880789 (-) // 99.47 // p13.1","Gene.Title":"growth arrest-specific 7 /// growth arrest-specific 7","Gene.Symbol":"GAS7","Chromosomal.Location":"chr17p13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000007237","Entrez.Gene":"8522","SwissProt":"O60861 /// Q29RX5 /// Q53Y77 /// Q59GS9 /// Q7Z571","EC":"---","OMIM":"603127","RefSeq.Protein.ID":"NP_003635.2 /// NP_958836.1 /// NP_958839.1","RefSeq.Transcript.ID":"NM_003644 /// NM_201432 /// NM_201433","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7050 // cell cycle arrest // traceable author statement /// 7399 // nervous system development // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001452 // SH3 // 3.1E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001202 // WW/Rsp5/WWP domain // 3.5E-13 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24 /// IPR001060 // Cdc15/Fes/CIP4 // 2.3E-24","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003644(11),NM_201432(11),NM_201433(11)","Transcript.Assignments":"NM_201432 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant b, mRNA. // refseq // 11 // --- /// NM_201433 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, mRNA. // refseq // 11 // --- /// NM_003644 // Homo sapiens growth arrest-specific 7 (GAS7), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000323816 // cdna:known-ccds chromosome:NCBI36:17:9754651:10042593:-1 gene:ENSG00000007237 CCDS11152.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"10511"}
{"Probe.Set.ID":"203821_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4503412","Target.Description":"gb:NM_001945.1 /DEF=Homo sapiens diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor) (DTR), mRNA.  /FEA=mRNA /GEN=DTR /PROD=diphtheria toxin receptor (heparin-bindingepidermal growth factor-like growth factor) /DB_XREF=gi:4503412 /UG=Hs.799 diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor) /FL=gb:M60278.1 gb:NM_001945.1","Representative.Public.ID":"NM_001945","Archival.UniGene.Cluster":"Hs.799","UniGene.ID":"Hs.799","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:139692612-139706358 (-) // 94.03 // q31.3","Gene.Title":"heparin-binding EGF-like growth factor","Gene.Symbol":"HBEGF","Chromosomal.Location":"chr5q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000113070","Entrez.Gene":"1839","SwissProt":"Q53H93 /// Q99075","EC":"---","OMIM":"126150","RefSeq.Protein.ID":"NP_001936.1","RefSeq.Transcript.ID":"NM_001945","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // traceable author statement /// 7517 // muscle development // traceable author statement","Gene.Ontology.Cellular.Component":"5615 // extracellular space // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 9986 // cell surface // non-traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 5154 // epidermal growth factor receptor binding // traceable author statement /// 8083 // growth factor activity // inferred from electronic annotation /// 8201 // heparin binding // inferred from mutant phenotype /// 8201 // heparin binding // inferred from electronic annotation","Pathway":"Hypertrophy_model // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006209 // EGF-like domain // 2.5E-7","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001945(11)","Transcript.Assignments":"NM_001945 // Homo sapiens heparin-binding EGF-like growth factor (HBEGF), mRNA. // refseq // 11 // --- /// ENST00000230990 // cdna:known-ccds chromosome:NCBI36:5:139692615:139706359:-1 gene:ENSG00000113070 CCDS4223.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"3348"}
{"Probe.Set.ID":"222076_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.799.1","Target.Description":"Consensus includes gb:BE222436 /FEA=EST /DB_XREF=gi:8909754 /DB_XREF=est:hv90h11.x1 /CLONE=IMAGE:3180741 /UG=Hs.799 diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor)","Representative.Public.ID":"BE222436","Archival.UniGene.Cluster":"Hs.799","UniGene.ID":"Hs.799","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:139702524-139706308 (+) // 96.72 // q31.3","Gene.Title":"Heparin-binding EGF-like growth factor","Gene.Symbol":"HBEGF","Chromosomal.Location":"chr5q23","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"1839","SwissProt":"Q53H93 /// Q99075","EC":"---","OMIM":"126150","RefSeq.Protein.ID":"NP_001936.1","RefSeq.Transcript.ID":"NM_001945","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // traceable author statement /// 7517 // muscle development // traceable author statement","Gene.Ontology.Cellular.Component":"5615 // extracellular space // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 9986 // cell surface // non-traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 5154 // epidermal growth factor receptor binding // traceable author statement /// 8083 // growth factor activity // inferred from electronic annotation /// 8201 // heparin binding // inferred from mutant phenotype /// 8201 // heparin binding // inferred from electronic annotation","Pathway":"Hypertrophy_model // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 13 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AI023180,BF594452,BF109423,BE669728,AW341097,H46786,AI697686,AA601605,AI871611,AW299571,BE222436,BE045577,AI253252","Transcript.Assignments":"AA601605 // nn90h03.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-1098485 /clone_end=3' /gb=AA601605 /gi=2435230 /ug=Hs.799 /len=473 // gb // --- // --- /// AA601605 // /DB_XREF=nn90h03.s1 /CLONE=IMAGE:1098485 // gb // --- // --- /// AI023180 // ow66e08.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-1651814 /clone_end=3' /gb=AI023180 /gi=3238421 /ug=Hs.799 /len=540 // gb // --- // --- /// AI023180 // /DB_XREF=ow66e08.s1 /CLONE=IMAGE:1651814 // gb // --- // --- /// AI253252 // qz39g07.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2029308 /clone_end=3' /gb=AI253252 /gi=3849781 /ug=Hs.799 /len=346 // gb // --- // --- /// AI253252 // /DB_XREF=qz39g07.x1 /CLONE=IMAGE:2029308 // gb // --- // --- /// AI697686 // we16c01.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2341248 /clone_end=3' /gb=AI697686 /gi=4985586 /ug=Hs.799 /len=428 // gb // --- // --- /// AI697686 // /DB_XREF=we16c01.x1 /CLONE=IMAGE:2341248 // gb // --- // --- /// AI871611 // we28c08.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2342414 /clone_end=3' /gb=AI871611 /gi=5545660 /ug=Hs.799 /len=404 // gb // --- // --- /// AI871611 // /DB_XREF=we28c08.x1 /CLONE=IMAGE:2342414 // gb // --- // --- /// AW299571 // /DB_XREF=xs51g10.x1 /CLONE=IMAGE:2773218 // gb // --- // --- /// AW341097 // /DB_XREF=xz94c03.x1 /CLONE=IMAGE:2871844 // gb // --- // --- /// BE045577 // /DB_XREF=hh23h10.x1 /CLONE=IMAGE:2956003 // gb // --- // --- /// BE222436 // /DB_XREF=hv90h11.x1 /CLONE=IMAGE:3180741 // gb // --- // --- /// BE669728 // /DB_XREF=7e35b12.x1 /CLONE=IMAGE:3284447 // gb // --- // --- /// BF109423 // /DB_XREF=7l62h01.x1 /CLONE=IMAGE:3526128 // gb // --- // --- /// BF594452 // /DB_XREF=7i06e04.x1 /CLONE=IMAGE:3324702 // gb // --- // --- /// H46786 // yo14c01.r1 Homo sapiens cDNA, 5' end /clone=IMAGE-177888 /clone_end=5' /gb=H46786 /gi=922838 /ug=Hs.799 /len=332 // gb // --- // --- /// H46786 // yo14c01.r1 Homo sapiens cDNA, 5' end /contact=R.K.Wilson /clone=177888 /clone_end=5' /gb=H46786 /gi=922838 /len=332 // gb // --- // --- /// H46786 // /DB_XREF=yo14c01.r1 /CLONE=IMAGE:177888 // gb // --- // ---","Annotation.Notes":"NM_001945 // refseq // 11 // Negative Strand Matching Probes /// ENST00000230990 // ensembl_transcript // 11 // Negative Strand Matching Probes","_row":"21436"}
{"Probe.Set.ID":"38037_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"4903762_RC","Target.Description":" Cluster Incl. M60278:Human heparin-binding EGF-like growth factor mRNA, complete cds /cds=(261,887) /gb=M60278 /gi=183866 /ug=Hs.799 /len=2342 ","Representative.Public.ID":"M60278","Archival.UniGene.Cluster":"Hs.799","UniGene.ID":"Hs.799","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:139692611-139706317 (-) // 90.34 // q31.3","Gene.Title":"heparin-binding EGF-like growth factor","Gene.Symbol":"HBEGF","Chromosomal.Location":"chr5q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000113070","Entrez.Gene":"1839","SwissProt":"Q53H93 /// Q99075","EC":"---","OMIM":"126150","RefSeq.Protein.ID":"NP_001936.1","RefSeq.Transcript.ID":"NM_001945","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // traceable author statement /// 7517 // muscle development // traceable author statement","Gene.Ontology.Cellular.Component":"5615 // extracellular space // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 9986 // cell surface // non-traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 5154 // epidermal growth factor receptor binding // traceable author statement /// 8083 // growth factor activity // inferred from electronic annotation /// 8201 // heparin binding // inferred from mutant phenotype /// 8201 // heparin binding // inferred from electronic annotation","Pathway":"Hypertrophy_model // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006209 // EGF-like domain // 2.5E-7","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001945(15)","Transcript.Assignments":"NM_001945 // Homo sapiens heparin-binding EGF-like growth factor (HBEGF), mRNA. // refseq // 15 // --- /// ENST00000230990 // cdna:known-ccds chromosome:NCBI36:5:139692615:139706359:-1 gene:ENSG00000113070 CCDS4223.1 // ensembl_transcript // 16 // ---","Annotation.Notes":"---","_row":"21905"}
{"Probe.Set.ID":"202432_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g11036639","Target.Description":"gb:NM_021132.1 /DEF=Homo sapiens protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) (PPP3CB), mRNA.  /FEA=mRNA /GEN=PPP3CB /PROD=protein phosphatase 3 (formerly 2B), catalyticsubunit, beta isoform (calcineurin A beta) /DB_XREF=gi:11036639 /UG=Hs.151531 protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) /FL=gb:NM_021132.1 gb:M29551.1","Representative.Public.ID":"NM_021132","Archival.UniGene.Cluster":"Hs.151531","UniGene.ID":"Hs.500067","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:74866617-74925760 (-) // 98.96 // q22.2","Gene.Title":"protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)","Gene.Symbol":"PPP3CB","Chromosomal.Location":"chr10q21-q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000107758","Entrez.Gene":"5532","SwissProt":"P16298 /// Q59G58 /// Q8N1F0","EC":"EC:3.1.3.16","OMIM":"114106","RefSeq.Protein.ID":"NP_066955.1","RefSeq.Transcript.ID":"NM_021132","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // non-traceable author statement /// 6351 // transcription, DNA-dependent // not recorded /// 6470 // protein amino acid dephosphorylation // not recorded /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5955 // calcineurin complex // inferred from direct assay /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 5506 // iron ion binding // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from direct assay /// 5516 // calmodulin binding // non-traceable author statement /// 8270 // zinc ion binding // inferred from electronic annotation /// 16787 // hydrolase activity // inferred from electronic annotation /// 4721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 5516 // calmodulin binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 5516 // calmodulin binding // not recorded","Pathway":"Calcium signaling pathway // KEGG /// Apoptosis // KEGG /// Wnt signaling pathway // KEGG /// TGF-beta signaling pathway // KEGG /// Axon guidance // KEGG /// VEGF signaling pathway // KEGG /// Focal adhesion // KEGG /// Tight junction // KEGG /// T cell receptor signaling pathway // KEGG /// B cell receptor signaling pathway // KEGG /// Long-term potentiation // KEGG /// Long-term depression // KEGG /// Insulin signaling pathway // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 3.5E-36 /// IPR004843 // Metallo-phosphoesterase // 3.5E-36","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_021132(11)","Transcript.Assignments":"NM_021132 // Homo sapiens protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) (PPP3CB), mRNA. // refseq // 11 // --- /// ENST00000360663 // cdna:known-ccds chromosome:NCBI36:10:74866192:74925765:-1 gene:ENSG00000107758 CCDS7328.1 // ensembl_transcript // 11 // --- /// ENST00000320361 // cdna:known chromosome:NCBI36:10:74866570:74925765:-1 gene:ENSG00000107758 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"1960"}
{"Probe.Set.ID":"209817_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g180706","Target.Description":"gb:M29550.1 /DEF=Human calcineurin A1 mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:180706 /UG=Hs.272458 protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) /FL=gb:M29550.1","Representative.Public.ID":"M29550","Archival.UniGene.Cluster":"Hs.272458","UniGene.ID":"Hs.500067","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:74873565-74925760 (-) // 95.88 // q22.2","Gene.Title":"protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)","Gene.Symbol":"PPP3CB","Chromosomal.Location":"chr10q21-q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000107758","Entrez.Gene":"5532","SwissProt":"P16298 /// Q59G58 /// Q8N1F0","EC":"EC:3.1.3.16","OMIM":"114106","RefSeq.Protein.ID":"NP_066955.1","RefSeq.Transcript.ID":"NM_021132","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // non-traceable author statement /// 6351 // transcription, DNA-dependent // not recorded /// 6470 // protein amino acid dephosphorylation // not recorded /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5955 // calcineurin complex // inferred from direct assay /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 5506 // iron ion binding // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from direct assay /// 5516 // calmodulin binding // non-traceable author statement /// 8270 // zinc ion binding // inferred from electronic annotation /// 16787 // hydrolase activity // inferred from electronic annotation /// 4721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 5516 // calmodulin binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 5516 // calmodulin binding // not recorded","Pathway":"Calcium signaling pathway // KEGG /// Apoptosis // KEGG /// Wnt signaling pathway // KEGG /// TGF-beta signaling pathway // KEGG /// Axon guidance // KEGG /// VEGF signaling pathway // KEGG /// Focal adhesion // KEGG /// Tight junction // KEGG /// T cell receptor signaling pathway // KEGG /// B cell receptor signaling pathway // KEGG /// Long-term potentiation // KEGG /// Long-term depression // KEGG /// Insulin signaling pathway // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.2E-32 /// IPR004843 // Metallo-phosphoesterase // 1.2E-32 /// IPR008250 // E1-E2 ATPase-associated region // 2.3E-35","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"M29550(11)","Transcript.Assignments":"AB209251 // Homo sapiens mRNA for Na+/K+ -ATPase alpha 3 subunit variant protein. // gb // 11 // --- /// M29550 // Human calcineurin A1 mRNA, complete cds. // gb // 11 // --- /// ENST00000342558 // cdna:known chromosome:NCBI36:10:74873544:74925760:-1 gene:ENSG00000107758 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9303"}
{"Probe.Set.ID":"215586_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.288567.0","Target.Description":"Consensus includes gb:AK024173.1 /DEF=Homo sapiens cDNA FLJ14111 fis, clone MAMMA1001630. /FEA=mRNA /DB_XREF=gi:10436489 /UG=Hs.288567 Homo sapiens cDNA FLJ14111 fis, clone MAMMA1001630","Representative.Public.ID":"AK024173","Archival.UniGene.Cluster":"Hs.288567","UniGene.ID":"Hs.500067","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:74910765-74911654 (-) // 30.82 // q22.2","Gene.Title":"Protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)","Gene.Symbol":"PPP3CB","Chromosomal.Location":"chr10q21-q22","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"5532","SwissProt":"P16298 /// Q59G58 /// Q8N1F0","EC":"EC:3.1.3.16","OMIM":"114106","RefSeq.Protein.ID":"NP_066955.1","RefSeq.Transcript.ID":"NM_021132","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // non-traceable author statement /// 6351 // transcription, DNA-dependent // not recorded /// 6470 // protein amino acid dephosphorylation // not recorded /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5955 // calcineurin complex // inferred from direct assay /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 5506 // iron ion binding // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from direct assay /// 5516 // calmodulin binding // non-traceable author statement /// 8270 // zinc ion binding // inferred from electronic annotation /// 16787 // hydrolase activity // inferred from electronic annotation /// 4721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 5516 // calmodulin binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 5516 // calmodulin binding // not recorded","Pathway":"Calcium signaling pathway // KEGG /// Apoptosis // KEGG /// Wnt signaling pathway // KEGG /// TGF-beta signaling pathway // KEGG /// Axon guidance // KEGG /// VEGF signaling pathway // KEGG /// Focal adhesion // KEGG /// Tight junction // KEGG /// T cell receptor signaling pathway // KEGG /// B cell receptor signaling pathway // KEGG /// Long-term potentiation // KEGG /// Long-term depression // KEGG /// Insulin signaling pathway // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK024173(11)","Transcript.Assignments":"AK024173 // Homo sapiens cDNA FLJ14111 fis, clone MAMMA1001630. // gb // 11 // ---","Annotation.Notes":"---","_row":"14959"}
{"Probe.Set.ID":"209793_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.7117.1","Target.Description":"Consensus includes gb:AL567302 /FEA=EST /DB_XREF=gi:12920523 /DB_XREF=est:AL567302 /CLONE=CS0DF027YK04 (3 prime) /UG=Hs.7117 glutamate receptor, ionotropic, AMPA 1 /FL=gb:M81886.1 gb:NM_000827.2","Representative.Public.ID":"AL567302","Archival.UniGene.Cluster":"Hs.7117","UniGene.ID":"Hs.519693","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:152850498-153173622 (+) // 98.78 // q33.2","Gene.Title":"glutamate receptor, ionotropic, AMPA 1","Gene.Symbol":"GRIA1","Chromosomal.Location":"chr5q33|5q31.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000155511","Entrez.Gene":"2890","SwissProt":"P42261 /// Q2NKM6 /// Q59GL5","EC":"---","OMIM":"138248","RefSeq.Protein.ID":"NP_000818.1","RefSeq.Transcript.ID":"NM_000827","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation /// 45211 // postsynaptic membrane // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // not recorded /// 5215 // transporter activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5234 // glutamate-gated ion channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 15277 // kainate selective glutamate receptor activity // traceable author statement /// 4970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 8066 // glutamate receptor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000340 // Dual specificity protein phosphatase // 3.9E-22 /// IPR001320 // Ionotropic glutamate receptor // 1.0E-126 /// IPR001828 // Extracellular ligand-binding receptor // 2.7E-61 /// IPR001841 // Zn-finger, RING // 3.0E-16 /// IPR003877 // SPla/RYanodine receptor SPRY // 1.9E-23 /// IPR000315 // Zn-finger, B-box // 2.4E-15 /// IPR001664 // Intermediate filament protein // 2.3E-33 /// IPR001664 // Intermediate filament protein // 1.3E-33","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Genome Consensus/Exemplar Overlap based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Genome Consensus/Exemplar Overlap // C","Annotation.Transcript.Cluster":"NM_000827","Transcript.Assignments":"ENSESTT00000085070 // --- // ensembl_est // 0 // chr5:153010230-153065925(+) /// GENSCAN00000005085 // cdna:Genscan chromosome:NCBI36:5:152999569:153113777:1 // ensembl_prediction // 0 // chr5:152999568-153113777(+) /// ENST00000285900 // cdna:known-ccds chromosome:NCBI36:5:152850499:153171354:1 gene:ENSG00000155511 CCDS4322.1 // ensembl_transcript // 0 // chr5:152850498-153171354(+) /// NM_000827 // Homo sapiens glutamate receptor, ionotropic, AMPA 1 (GRIA1), mRNA. // refseq // 0 // chr5:152850498-153171354(+) /// GENSCAN00000030797 // cdna:Genscan chromosome:NCBI36:5:153124187:153170978:1 // ensembl_prediction // 0 // chr5:153124186-153170978(+) /// GENSCAN00000065150 // cdna:Genscan chromosome:NCBI36:5:152821391:152880123:1 // ensembl_prediction // 0 // chr5:152839482-152880123(+) /// ENST00000340592 // cdna:known chromosome:NCBI36:5:152850569:153171354:1 gene:ENSG00000155511 // ensembl_transcript // 0 // chr5:152850568-153171354(+) /// ENSESTT00000065878 // --- // ensembl_est // 0 // chr5:152850396-152854087(+) /// ENSESTT00000065879 // --- // ensembl_est // 0 // chr5:152853742-152885275(+)","Annotation.Notes":"---","_row":"9281"}
{"Probe.Set.ID":"211520_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g183280","Target.Description":"gb:M64752.1 /DEF=Human glutamate receptor subunit (GluH1) mRNA, complete cds. /FEA=mRNA /GEN=GluH1 /PROD=glutamate receptor subunit /DB_XREF=gi:183280 /UG=Hs.7117 glutamate receptor, ionotropic, AMPA 1 /FL=gb:M64752.1","Representative.Public.ID":"M64752","Archival.UniGene.Cluster":"Hs.7117","UniGene.ID":"Hs.519693","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:152850568-153171354 (+) // 99.53 // q33.2","Gene.Title":"glutamate receptor, ionotropic, AMPA 1","Gene.Symbol":"GRIA1","Chromosomal.Location":"chr5q33|5q31.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000155511","Entrez.Gene":"2890","SwissProt":"P42261 /// Q2NKM6 /// Q59GL5","EC":"---","OMIM":"138248","RefSeq.Protein.ID":"NP_000818.1","RefSeq.Transcript.ID":"NM_000827","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation /// 45211 // postsynaptic membrane // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // not recorded /// 5215 // transporter activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5234 // glutamate-gated ion channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 15277 // kainate selective glutamate receptor activity // traceable author statement /// 4970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 8066 // glutamate receptor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001320 // Ionotropic glutamate receptor // 1.0E-126 /// IPR001828 // Extracellular ligand-binding receptor // 2.7E-61","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000827(11)","Transcript.Assignments":"NM_000827 // Homo sapiens glutamate receptor, ionotropic, AMPA 1 (GRIA1), mRNA. // refseq // 11 // --- /// ENST00000285900 // cdna:known-ccds chromosome:NCBI36:5:152850499:153171354:1 gene:ENSG00000155511 CCDS4322.1 // ensembl_transcript // 11 // --- /// ENST00000340592 // cdna:known chromosome:NCBI36:5:152850569:153171354:1 gene:ENSG00000155511 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"10926"}
{"Probe.Set.ID":"215634_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.302185.0","Target.Description":"Consensus includes gb:AF007137.1 /DEF=Homo sapiens clone 23618 mRNA sequence. /FEA=mRNA /DB_XREF=gi:2852612 /UG=Hs.302185 Homo sapiens clone 23618 mRNA sequence","Representative.Public.ID":"AF007137","Archival.UniGene.Cluster":"Hs.302185","UniGene.ID":"Hs.519693","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:153146434-153147832 (+) // 73.13 // q33.2","Gene.Title":"Glutamate receptor, ionotropic, AMPA 1","Gene.Symbol":"GRIA1","Chromosomal.Location":"chr5q33|5q31.1","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"2890","SwissProt":"P42261 /// Q2NKM6 /// Q59GL5","EC":"---","OMIM":"138248","RefSeq.Protein.ID":"NP_000818.1","RefSeq.Transcript.ID":"NM_000827","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation /// 45211 // postsynaptic membrane // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // not recorded /// 5215 // transporter activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5234 // glutamate-gated ion channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 15277 // kainate selective glutamate receptor activity // traceable author statement /// 4970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 8066 // glutamate receptor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF007137(11)","Transcript.Assignments":"AF007137 // Homo sapiens clone 23618 mRNA sequence. // gb // 11 // ---","Annotation.Notes":"---","_row":"15007"}
{"Probe.Set.ID":"205598_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5032194","Target.Description":"gb:NM_005879.1 /DEF=Homo sapiens TRAF interacting protein (TRIP), mRNA. /FEA=mRNA /GEN=TRIP /PROD=TRAF interacting protein /DB_XREF=gi:5032194 /UG=Hs.21254 TRAF interacting protein /FL=gb:BC000310.1 gb:U77845.1 gb:NM_005879.1","Representative.Public.ID":"NM_005879","Archival.UniGene.Cluster":"Hs.21254","UniGene.ID":"Hs.517972","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:49841067-49868989 (-) // 97.66 // p21.31","Gene.Title":"TRAF interacting protein","Gene.Symbol":"TRAIP","Chromosomal.Location":"chr3p21.31","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000183763","Entrez.Gene":"10293","SwissProt":"Q9BWF2","EC":"---","OMIM":"605958","RefSeq.Protein.ID":"NP_005870.2","RefSeq.Transcript.ID":"NM_005879","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6917 // induction of apoptosis // traceable author statement /// 7165 // signal transduction // traceable author statement /// 8283 // cell proliferation // traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001841 // Zn-finger, RING // 4.7E-10 /// IPR008428 // Chondroitin N-acetylgalactosaminyltransferase // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Genome Target Overlap based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Genome Target Overlap // B","Annotation.Transcript.Cluster":"NM_005879","Transcript.Assignments":"ENST00000331456 // cdna:known-ccds chromosome:NCBI36:3:49841032:49868996:-1 gene:ENSG00000183763 CCDS2806.1 // ensembl_transcript // 0 // chr3:49841031-49868996(-) /// NM_005879 // Homo sapiens TRAF interacting protein (TRAIP), mRNA. // refseq // 0 // chr3:49841031-49868996(-) /// GENSCAN00000024705 // cdna:Genscan chromosome:NCBI36:3:49818330:49868890:-1 // ensembl_prediction // 0 // chr3:49818329-49868890(-) /// ENSESTT00000098129 // --- // ensembl_est // 0 // chr3:49844359-49868991(-)","Annotation.Notes":"---","_row":"5125"}
{"Probe.Set.ID":"202730_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7657448","Target.Description":"gb:NM_014456.1 /DEF=Homo sapiens programmed cell death 4 (PDCD4), mRNA. /FEA=mRNA /GEN=PDCD4 /PROD=programmed cell death 4 /DB_XREF=gi:7657448 /UG=Hs.296251 programmed cell death 4 /FL=gb:U96628.1 gb:NM_014456.1","Representative.Public.ID":"NM_014456","Archival.UniGene.Cluster":"Hs.296251","UniGene.ID":"Hs.232543","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:112625712-112647964 (+) // 96.86 // q25.2","Gene.Title":"programmed cell death 4 (neoplastic transformation inhibitor)","Gene.Symbol":"PDCD4","Chromosomal.Location":"chr10q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000150593","Entrez.Gene":"27250","SwissProt":"O15501 /// Q53EL6 /// Q6PJI5 /// Q8TAR5","EC":"---","OMIM":"608610","RefSeq.Protein.ID":"NP_055271.2 /// NP_663314.1","RefSeq.Transcript.ID":"NM_014456 /// NM_145341","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6915 // apoptosis // traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// --- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BX537500(11),NM_014456(11),NM_145341(11)","Transcript.Assignments":"ENSESTT00000061005 // --- // ensembl_est // 11 // --- /// ENSESTT00000061007 // --- // ensembl_est // 11 // --- /// ENSESTT00000061009 // --- // ensembl_est // 11 // --- /// BX537500 // Homo sapiens mRNA; cDNA DKFZp686B11166 (from clone DKFZp686B11166). // gb // 11 // --- /// NM_145341 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_014456 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000280154 // cdna:known-ccds chromosome:NCBI36:10:112621555:112649754:1 gene:ENSG00000150593 CCDS7567.1 // ensembl_transcript // 11 // --- /// ENST00000347694 // cdna:known chromosome:NCBI36:10:112621586:112649753:1 gene:ENSG00000150593 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"2258"}
{"Probe.Set.ID":"202731_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7657448","Target.Description":"gb:NM_014456.1 /DEF=Homo sapiens programmed cell death 4 (PDCD4), mRNA. /FEA=mRNA /GEN=PDCD4 /PROD=programmed cell death 4 /DB_XREF=gi:7657448 /UG=Hs.296251 programmed cell death 4 /FL=gb:U96628.1 gb:NM_014456.1","Representative.Public.ID":"NM_014456","Archival.UniGene.Cluster":"Hs.296251","UniGene.ID":"Hs.232543","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:112625712-112647964 (+) // 96.86 // q25.2","Gene.Title":"programmed cell death 4 (neoplastic transformation inhibitor)","Gene.Symbol":"PDCD4","Chromosomal.Location":"chr10q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000150593","Entrez.Gene":"27250","SwissProt":"O15501 /// Q53EL6 /// Q6PJI5 /// Q8TAR5","EC":"---","OMIM":"608610","RefSeq.Protein.ID":"NP_055271.2 /// NP_663314.1","RefSeq.Transcript.ID":"NM_014456 /// NM_145341","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6915 // apoptosis // traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// --- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BX537500(11),NM_014456(11),NM_145341(11)","Transcript.Assignments":"ENSESTT00000061005 // --- // ensembl_est // 11 // --- /// ENSESTT00000061007 // --- // ensembl_est // 11 // --- /// ENSESTT00000061009 // --- // ensembl_est // 11 // --- /// BX537500 // Homo sapiens mRNA; cDNA DKFZp686B11166 (from clone DKFZp686B11166). // gb // 11 // --- /// NM_145341 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_014456 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000280154 // cdna:known-ccds chromosome:NCBI36:10:112621555:112649754:1 gene:ENSG00000150593 CCDS7567.1 // ensembl_transcript // 11 // --- /// ENST00000347694 // cdna:known chromosome:NCBI36:10:112621586:112649753:1 gene:ENSG00000150593 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000061006 // ensembl_est // 6 // Cross Hyb Matching Probes /// ENSESTT00000061008 // ensembl_est // 6 // Cross Hyb Matching Probes /// BX641168 // gb // 2 // Cross Hyb Matching Probes","_row":"2259"}
{"Probe.Set.ID":"212593_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.326248.1","Target.Description":"Consensus includes gb:N92498 /FEA=EST /DB_XREF=gi:1264807 /DB_XREF=est:zb28a04.s1 /CLONE=IMAGE:304878 /UG=Hs.326248 Homo sapiens cDNA: FLJ22071 fis, clone HEP11691","Representative.Public.ID":"N92498","Archival.UniGene.Cluster":"Hs.326248","UniGene.ID":"Hs.232543","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:112645708-112649754 (+) // 83.59 // q25.2","Gene.Title":"programmed cell death 4 (neoplastic transformation inhibitor)","Gene.Symbol":"PDCD4","Chromosomal.Location":"chr10q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000150593","Entrez.Gene":"27250","SwissProt":"O15501 /// Q53EL6 /// Q6PJI5 /// Q8TAR5","EC":"---","OMIM":"608610","RefSeq.Protein.ID":"NP_055271.2 /// NP_663314.1","RefSeq.Transcript.ID":"NM_014456 /// NM_145341","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6915 // apoptosis // traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// --- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BX537500(11),NM_014456(11),NM_145341(11)","Transcript.Assignments":"BX537500 // Homo sapiens mRNA; cDNA DKFZp686B11166 (from clone DKFZp686B11166). // gb // 11 // --- /// NM_145341 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_014456 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000280154 // cdna:known-ccds chromosome:NCBI36:10:112621555:112649754:1 gene:ENSG00000150593 CCDS7567.1 // ensembl_transcript // 11 // --- /// ENST00000347694 // cdna:known chromosome:NCBI36:10:112621586:112649753:1 gene:ENSG00000150593 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000061005 // ensembl_est // 6 // Cross Hyb Matching Probes /// ENSESTT00000061007 // ensembl_est // 6 // Cross Hyb Matching Probes /// ENSESTT00000061009 // ensembl_est // 6 // Cross Hyb Matching Probes","_row":"11978"}
{"Probe.Set.ID":"212594_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.326248.1","Target.Description":"Consensus includes gb:AI185160 /FEA=EST /DB_XREF=gi:3735798 /DB_XREF=est:qe30g10.s1 /CLONE=IMAGE:1740546 /UG=Hs.326248 Homo sapiens cDNA: FLJ22071 fis, clone HEP11691","Representative.Public.ID":"AI185160","Archival.UniGene.Cluster":"Hs.326248","UniGene.ID":"Hs.232543","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:112645708-112649754 (+) // 83.59 // q25.2","Gene.Title":"programmed cell death 4 (neoplastic transformation inhibitor)","Gene.Symbol":"PDCD4","Chromosomal.Location":"chr10q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000150593","Entrez.Gene":"27250","SwissProt":"O15501 /// Q53EL6 /// Q6PJI5 /// Q8TAR5","EC":"---","OMIM":"608610","RefSeq.Protein.ID":"NP_055271.2 /// NP_663314.1","RefSeq.Transcript.ID":"NM_014456 /// NM_145341","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6915 // apoptosis // traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// --- // --- // 4.3E-46 /// --- // --- // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 4.3E-46 /// IPR003891 // Initiation factor eIF-4 gamma, MA3 // 1.6E-50","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_014456(11),NM_145341(11)","Transcript.Assignments":"NM_145341 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_014456 // Homo sapiens programmed cell death 4 (neoplastic transformation inhibitor) (PDCD4), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000280154 // cdna:known-ccds chromosome:NCBI36:10:112621555:112649754:1 gene:ENSG00000150593 CCDS7567.1 // ensembl_transcript // 11 // --- /// ENST00000347694 // cdna:known chromosome:NCBI36:10:112621586:112649753:1 gene:ENSG00000150593 // ensembl_transcript // 11 // ---","Annotation.Notes":"AY008445 // gb // 7 // Cross Hyb Matching Probes /// BC073157 // gb // 11 // Negative Strand Matching Probes /// BC105804 // gb // 2 // Negative Strand Matching Probes","_row":"11979"}
{"Probe.Set.ID":"202082_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.75232.0","Target.Description":"Consensus includes gb:AV748469 /FEA=EST /DB_XREF=gi:10906317 /DB_XREF=est:AV748469 /CLONE=NPCAXA07 /UG=Hs.75232 SEC14 (S. cerevisiae)-like 1 /FL=gb:D67029.1 gb:NM_003003.1","Representative.Public.ID":"AV748469","Archival.UniGene.Cluster":"Hs.75232","UniGene.ID":"Hs.464184","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:72648616-72724778 (+) // 88.02 // q25.2","Gene.Title":"SEC14-like 1 (S. cerevisiae)","Gene.Symbol":"SEC14L1","Chromosomal.Location":"chr17q25.1-17q25.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000129657","Entrez.Gene":"6397","SwissProt":"Q59HE8 /// Q6ZP00 /// Q7Z3R7 /// Q92503 /// Q9H3C1","EC":"---","OMIM":"601504","RefSeq.Protein.ID":"NP_001034662.1 /// NP_002994.2","RefSeq.Transcript.ID":"NM_001039573 /// NM_003003","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5622 // intracellular // inferred from electronic annotation /// 5794 // Golgi apparatus // traceable author statement /// 16020 // membrane // traceable author statement","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5488 // binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR007999 // Protein of unknown function DUF745 // 6.1E-117 /// IPR008273 // Cellular retinaldehyde-binding/triple function, N-terminal // 2.6E-14 /// IPR001251 // Cellular retinaldehyde-binding)/triple function, C-terminal // 4.2E-46 /// IPR006797 // MSF1 // 1.2E-81","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001039573(11),NM_003003(11)","Transcript.Assignments":"ENSESTT00000047149 // --- // ensembl_est // 11 // --- /// NM_003003 // Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001039573 // Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), transcript variant 2, mRNA. // refseq // 11 // --- /// GENSCAN00000002903 // cdna:Genscan chromosome:NCBI36:17:72669756:72767744:1 // ensembl_prediction // 10 // --- /// ENST00000262775 // cdna:known-ccds chromosome:NCBI36:17:72648647:72722006:1 gene:ENSG00000129657 CCDS11752.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000047151 // ensembl_est // 1 // Cross Hyb Matching Probes /// ENSESTT00000094935 // ensembl_est // 7 // Cross Hyb Matching Probes /// GENSCAN00000043572 // ensembl_prediction // 2 // Cross Hyb Matching Probes","_row":"1610"}
{"Probe.Set.ID":"202083_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.75232.0","Target.Description":"Consensus includes gb:AI017770 /FEA=EST /DB_XREF=gi:3232106 /DB_XREF=est:ov32b12.x1 /CLONE=IMAGE:1639007 /UG=Hs.75232 SEC14 (S. cerevisiae)-like 1 /FL=gb:D67029.1 gb:NM_003003.1","Representative.Public.ID":"AI017770","Archival.UniGene.Cluster":"Hs.75232","UniGene.ID":"Hs.464184","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:72648616-72724778 (+) // 88.02 // q25.2","Gene.Title":"SEC14-like 1 (S. cerevisiae)","Gene.Symbol":"SEC14L1","Chromosomal.Location":"chr17q25.1-17q25.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000129657","Entrez.Gene":"6397","SwissProt":"Q59HE8 /// Q6ZP00 /// Q7Z3R7 /// Q92503 /// Q9H3C1","EC":"---","OMIM":"601504","RefSeq.Protein.ID":"NP_001034662.1 /// NP_002994.2","RefSeq.Transcript.ID":"NM_001039573 /// NM_003003","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5622 // intracellular // inferred from electronic annotation /// 5794 // Golgi apparatus // traceable author statement /// 16020 // membrane // traceable author statement","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5488 // binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR008273 // Cellular retinaldehyde-binding/triple function, N-terminal // 2.6E-14 /// IPR001251 // Cellular retinaldehyde-binding)/triple function, C-terminal // 4.2E-46 /// IPR006797 // MSF1 // 1.2E-81","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK130317(11),NM_003003(11)","Transcript.Assignments":"ENSESTT00000094936 // --- // ensembl_est // 11 // --- /// ENSESTT00000094937 // --- // ensembl_est // 11 // --- /// AK094232 // Homo sapiens cDNA FLJ36913 fis, clone BRACE2003848, highly similar to Human SEC14L mRNA. // gb // 11 // --- /// AK130317 // Homo sapiens cDNA FLJ26807 fis, clone PRS06066. // gb // 11 // --- /// NM_003003 // Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000262775 // cdna:known-ccds chromosome:NCBI36:17:72648647:72722006:1 gene:ENSG00000129657 CCDS11752.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"1611"}
{"Probe.Set.ID":"202084_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4506866","Target.Description":"gb:NM_003003.1 /DEF=Homo sapiens SEC14 (S. cerevisiae)-like 1 (SEC14L1), mRNA. /FEA=mRNA /GEN=SEC14L1 /PROD=SEC14 (S. cerevisiae)-like 1 /DB_XREF=gi:4506866 /UG=Hs.75232 SEC14 (S. cerevisiae)-like 1 /FL=gb:D67029.1 gb:NM_003003.1","Representative.Public.ID":"NM_003003","Archival.UniGene.Cluster":"Hs.75232","UniGene.ID":"Hs.464184","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:72648616-72724774 (+) // 88.02 // q25.2","Gene.Title":"SEC14-like 1 (S. cerevisiae)","Gene.Symbol":"SEC14L1","Chromosomal.Location":"chr17q25.1-17q25.2","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"6397","SwissProt":"Q59HE8 /// Q6ZP00 /// Q7Z3R7 /// Q92503 /// Q9H3C1","EC":"---","OMIM":"601504","RefSeq.Protein.ID":"NP_001034662.1 /// NP_002994.2","RefSeq.Transcript.ID":"NM_001039573 /// NM_003003","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5622 // intracellular // inferred from electronic annotation /// 5794 // Golgi apparatus // traceable author statement /// 16020 // membrane // traceable author statement","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5488 // binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK130317(11),NM_001039573(11)","Transcript.Assignments":"AK130317 // Homo sapiens cDNA FLJ26807 fis, clone PRS06066. // gb // 11 // --- /// NM_001039573 // Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), transcript variant 2, mRNA. // refseq // 11 // ---","Annotation.Notes":"---","_row":"1612"}
{"Probe.Set.ID":"216630_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.306338.0","Target.Description":"Consensus includes gb:AL110190.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564J2116 (from clone DKFZp564J2116). /FEA=mRNA /DB_XREF=gi:5817104 /UG=Hs.306338 Homo sapiens mRNA; cDNA DKFZp564J2116 (from clone DKFZp564J2116)","Representative.Public.ID":"AL110190","Archival.UniGene.Cluster":"Hs.306338","UniGene.ID":"Hs.464184","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:72619498-72620556 (-) // 13.83 // q25.2","Gene.Title":"SEC14-like 1 (S. cerevisiae)","Gene.Symbol":"SEC14L1","Chromosomal.Location":"chr17q25.1-17q25.2","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"6397","SwissProt":"Q59HE8 /// Q6ZP00 /// Q7Z3R7 /// Q92503 /// Q9H3C1","EC":"---","OMIM":"601504","RefSeq.Protein.ID":"NP_001034662.1 /// NP_002994.2","RefSeq.Transcript.ID":"NM_001039573 /// NM_003003","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5622 // intracellular // inferred from electronic annotation /// 5794 // Golgi apparatus // traceable author statement /// 16020 // membrane // traceable author statement","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5488 // binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 1 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AL110190","Transcript.Assignments":"AL110190 // /DEF=Homo sapiens mRNA; cDNA DKFZp564J2116 (from clone DKFZp564J2116). // gb // --- // ---","Annotation.Notes":"---","_row":"16000"}
{"Probe.Set.ID":"216642_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.306338.0","Target.Description":"Consensus includes gb:AL110190.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564J2116 (from clone DKFZp564J2116). /FEA=mRNA /DB_XREF=gi:5817104 /UG=Hs.306338 Homo sapiens mRNA; cDNA DKFZp564J2116 (from clone DKFZp564J2116)","Representative.Public.ID":"AL110190","Archival.UniGene.Cluster":"Hs.306338","UniGene.ID":"Hs.464184","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:72619498-72771501 (+) // 13.83 // q25.2","Gene.Title":"SEC14-like 1 (S. cerevisiae)","Gene.Symbol":"SEC14L1","Chromosomal.Location":"chr17q25.1-17q25.2","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"6397","SwissProt":"Q59HE8 /// Q6ZP00 /// Q7Z3R7 /// Q92503 /// Q9H3C1","EC":"---","OMIM":"601504","RefSeq.Protein.ID":"NP_001034662.1 /// NP_002994.2","RefSeq.Transcript.ID":"NM_001039573 /// NM_003003","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5622 // intracellular // inferred from electronic annotation /// 5794 // Golgi apparatus // traceable author statement /// 16020 // membrane // traceable author statement","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5488 // binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 1 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AL110190","Transcript.Assignments":"AL110190 // /DEF=Homo sapiens mRNA; cDNA DKFZp564J2116 (from clone DKFZp564J2116). // gb // --- // ---","Annotation.Notes":"---","_row":"16012"}
{"Probe.Set.ID":"205489_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4503064","Target.Description":"gb:NM_001888.1 /DEF=Homo sapiens crystallin, mu (CRYM), mRNA. /FEA=mRNA /GEN=CRYM /PROD=crystallin, mu /DB_XREF=gi:4503064 /UG=Hs.924 crystallin, mu /FL=gb:L02950.1 gb:U85772.1 gb:NM_001888.1","Representative.Public.ID":"NM_001888","Archival.UniGene.Cluster":"Hs.924","UniGene.ID":"Hs.924","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr16:21177339-21197103 (-) // 99.52 // p12.2","Gene.Title":"crystallin, mu","Gene.Symbol":"CRYM","Chromosomal.Location":"chr16p13.11-p12.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000103316","Entrez.Gene":"1428","SwissProt":"Q14894 /// Q5HYB7","EC":"---","OMIM":"123740","RefSeq.Protein.ID":"NP_001014444.1 /// NP_001879.1","RefSeq.Transcript.ID":"NM_001014444 /// NM_001888","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7601 // visual perception // traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"3824 // catalytic activity // inferred from electronic annotation /// 8473 // ornithine cyclodeaminase activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR003462 // Ornithine cyclodeaminase/mu-crystallin // 1.0E-126 /// IPR003462 // Ornithine cyclodeaminase/mu-crystallin // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001014444(11),NM_001888(11)","Transcript.Assignments":"NM_001888 // Homo sapiens crystallin, mu (CRYM), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001014444 // Homo sapiens crystallin, mu (CRYM), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000219599 // cdna:known-ccds chromosome:NCBI36:16:21177344:21197782:-1 gene:ENSG00000103316 CCDS10597.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000050134 // ensembl_est // 8 // Cross Hyb Matching Probes /// GENSCAN00000011077 // ensembl_prediction // 3 // Cross Hyb Matching Probes","_row":"5016"}
{"Probe.Set.ID":"212731_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.11506.0","Target.Description":"Consensus includes gb:U79297.1 /DEF=Human clone 23589 mRNA sequence. /FEA=mRNA /DB_XREF=gi:1710280 /UG=Hs.11506 Human clone 23589 mRNA sequence","Representative.Public.ID":"U79297","Archival.UniGene.Cluster":"Hs.11506","UniGene.ID":"Hs.530199","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr8:101602177-101641163 (-) // 98.99 // q22.3","Gene.Title":"ankyrin repeat domain 46","Gene.Symbol":"ANKRD46","Chromosomal.Location":"chr8q22.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000186106","Entrez.Gene":"157567","SwissProt":"Q6P9B7 /// Q86W74","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_940683.1","RefSeq.Transcript.ID":"NM_198401","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002110 // Ankyrin // 0.53 /// IPR002110 // Ankyrin // 1.5E-8 /// IPR002110 // Ankyrin // 4.7E-4 /// IPR002110 // Ankyrin // 0.24","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC035087(10),NM_198401(11)","Transcript.Assignments":"BC035087 // Homo sapiens ankyrin repeat domain 46, mRNA (cDNA clone IMAGE:5261039), with apparent retained intron. // gb // 10 // --- /// NM_198401 // Homo sapiens ankyrin repeat domain 46 (ANKRD46), mRNA. // refseq // 11 // --- /// ENST00000335659 // cdna:known-ccds chromosome:NCBI36:8:101602178:101641163:-1 gene:ENSG00000186106 CCDS6287.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"12116"}
{"Probe.Set.ID":"204926_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4504698","Target.Description":"gb:NM_002192.1 /DEF=Homo sapiens inhibin, beta A (activin A, activin AB alpha polypeptide) (INHBA), mRNA.  /FEA=mRNA /GEN=INHBA /PROD=inhibin beta A subunit precursor /DB_XREF=gi:4504698 /UG=Hs.727 inhibin, beta A (activin A, activin AB alpha polypeptide) /FL=gb:J03634.1 gb:NM_002192.1","Representative.Public.ID":"NM_002192","Archival.UniGene.Cluster":"Hs.727","UniGene.ID":"Hs.583348","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr7:41695320-41706584 (-) // 89.78 // p14.1","Gene.Title":"inhibin, beta A (activin A, activin AB alpha polypeptide)","Gene.Symbol":"INHBA","Chromosomal.Location":"chr7p15-p13","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"3624","SwissProt":"P08476 /// Q53H39 /// Q5HYA2 /// Q9HBP0","EC":"---","OMIM":"147290","RefSeq.Protein.ID":"NP_002183.1","RefSeq.Transcript.ID":"NM_002192","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1501 // skeletal development // traceable author statement /// 1541 // ovarian follicle development // non-traceable author statement /// 6917 // induction of apoptosis // inferred from direct assay /// 6952 // defense response // traceable author statement /// 7050 // cell cycle arrest // traceable author statement /// 7166 // cell surface receptor linked signal transduction // traceable author statement /// 7267 // cell-cell signaling // traceable author statement /// 7399 // nervous system development // non-traceable author statement /// 7498 // mesoderm development // inferred from sequence or structural similarity /// 9605 // response to external stimulus // traceable author statement /// 30154 // cell differentiation // traceable author statement /// 30218 // erythrocyte differentiation // non-traceable author statement /// 40007 // growth // inferred from electronic annotation /// 42326 // negative regulation of phosphorylation // traceable author statement /// 42541 // hemoglobin biosynthesis // inferred from direct assay /// 45077 // negative regulation of interferon-gamma biosynthesis // traceable author statement /// 45578 // negative regulation of B cell differentiation // traceable author statement /// 45650 // negative regulation of macrophage differentiation // traceable author statement /// 46881 // positive regulation of follicle-stimulating hormone secretion // traceable author statement /// 46882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 1541 // ovarian follicle development // inferred from sequence or structural similarity /// 6917 // induction of apoptosis // inferred from sequence or structural similarity /// 6952 // defense response // inferred from sequence or structural similarity /// 7050 // cell cycle arrest // inferred from sequence or structural similarity /// 7166 // cell surface receptor linked signal transduction // inferred from sequence or structural similarity /// 7267 // cell-cell signaling // inferred from sequence or structural similarity /// 7399 // nervous system development // inferred from sequence or structural similarity /// 30154 // cell differentiation // inferred from sequence or structural similarity /// 30218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 42326 // negative regulation of phosphorylation // inferred from sequence or structural similarity /// 42541 // hemoglobin biosynthesis // inferred from sequence or structural similarity /// 45077 // negative regulation of interferon-gamma biosynthesis // inferred from sequence or structural similarity /// 45578 // negative regulation of B cell differentiation // inferred from sequence or structural similarity /// 45650 // negative regulation of macrophage differentiation // inferred from sequence or structural similarity /// 45786 // negative regulation of progression through cell cycle // inferred from sequence or structural similarity /// 46881 // positive regulation of follicle-stimulating hormone secretion // inferred from sequence or structural similarity /// 46882 // negative regulation of follicle-stimulating hormone secretion // inferred from sequence or structural similarity /// 7165 // signal transduction // traceable author statement /// 45786 // negative regulation of progression through cell cycle // traceable author statement","Gene.Ontology.Cellular.Component":"5576 // extracellular region // inferred from electronic annotation /// 5576 // extracellular region // traceable author statement /// 5576 // extracellular region // inferred from sequence or structural similarity","Gene.Ontology.Molecular.Function":"5125 // cytokine activity // traceable author statement /// 5160 // transforming growth factor beta receptor binding // not recorded /// 5179 // hormone activity // inferred from electronic annotation /// 5179 // hormone activity // traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 8083 // growth factor activity // inferred from electronic annotation /// 8083 // growth factor activity // traceable author statement /// 17106 // activin inhibitor activity // traceable author statement /// 5125 // cytokine activity // inferred from sequence or structural similarity /// 5179 // hormone activity // inferred from sequence or structural similarity /// 5515 // protein binding // inferred from sequence or structural similarity /// 8083 // growth factor activity // inferred from sequence or structural similarity /// 17106 // activin inhibitor activity // inferred from sequence or structural similarity","Pathway":"TGF_Beta_Signaling_Pathway // GenMAPP /// TGF_Beta_Signaling_Pathway // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Design Representative Id based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Design Representative Id // R","Annotation.Transcript.Cluster":"NM_002192","Transcript.Assignments":"NM_002192 // /DEF=Homo sapiens inhibin, beta A (activin A, activin AB alpha polypeptide) (INHBA), mRNA.  /GEN=INHBA /PROD=inhibin beta A subunit precursor // gb // --- // ---","Annotation.Notes":"ENST00000242208 // ensembl_transcript // 7 // Cross Hyb Matching Probes","_row":"4453"}
{"Probe.Set.ID":"210511_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g186414","Target.Description":"gb:M13436.1 /DEF=Human ovarian beta-A inhibin mRNA, complete cds. /FEA=mRNA /GEN=INHBA /DB_XREF=gi:186414 /UG=Hs.727 inhibin, beta A (activin A, activin AB alpha polypeptide) /FL=gb:M13436.1","Representative.Public.ID":"M13436","Archival.UniGene.Cluster":"Hs.727","UniGene.ID":"Hs.583348","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr7:41695656-41706734 (-) // 90.39 // p14.1","Gene.Title":"inhibin, beta A (activin A, activin AB alpha polypeptide)","Gene.Symbol":"INHBA","Chromosomal.Location":"chr7p15-p13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000122641","Entrez.Gene":"3624","SwissProt":"P08476 /// Q53H39 /// Q5HYA2 /// Q9HBP0","EC":"---","OMIM":"147290","RefSeq.Protein.ID":"NP_002183.1","RefSeq.Transcript.ID":"NM_002192","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1501 // skeletal development // traceable author statement /// 1541 // ovarian follicle development // non-traceable author statement /// 6917 // induction of apoptosis // inferred from direct assay /// 6952 // defense response // traceable author statement /// 7050 // cell cycle arrest // traceable author statement /// 7166 // cell surface receptor linked signal transduction // traceable author statement /// 7267 // cell-cell signaling // traceable author statement /// 7399 // nervous system development // non-traceable author statement /// 7498 // mesoderm development // inferred from sequence or structural similarity /// 9605 // response to external stimulus // traceable author statement /// 30154 // cell differentiation // traceable author statement /// 30218 // erythrocyte differentiation // non-traceable author statement /// 40007 // growth // inferred from electronic annotation /// 42326 // negative regulation of phosphorylation // traceable author statement /// 42541 // hemoglobin biosynthesis // inferred from direct assay /// 45077 // negative regulation of interferon-gamma biosynthesis // traceable author statement /// 45578 // negative regulation of B cell differentiation // traceable author statement /// 45650 // negative regulation of macrophage differentiation // traceable author statement /// 46881 // positive regulation of follicle-stimulating hormone secretion // traceable author statement /// 46882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 1541 // ovarian follicle development // inferred from sequence or structural similarity /// 6917 // induction of apoptosis // inferred from sequence or structural similarity /// 6952 // defense response // inferred from sequence or structural similarity /// 7050 // cell cycle arrest // inferred from sequence or structural similarity /// 7166 // cell surface receptor linked signal transduction // inferred from sequence or structural similarity /// 7267 // cell-cell signaling // inferred from sequence or structural similarity /// 7399 // nervous system development // inferred from sequence or structural similarity /// 30154 // cell differentiation // inferred from sequence or structural similarity /// 30218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 42326 // negative regulation of phosphorylation // inferred from sequence or structural similarity /// 42541 // hemoglobin biosynthesis // inferred from sequence or structural similarity /// 45077 // negative regulation of interferon-gamma biosynthesis // inferred from sequence or structural similarity /// 45578 // negative regulation of B cell differentiation // inferred from sequence or structural similarity /// 45650 // negative regulation of macrophage differentiation // inferred from sequence or structural similarity /// 45786 // negative regulation of progression through cell cycle // inferred from sequence or structural similarity /// 46881 // positive regulation of follicle-stimulating hormone secretion // inferred from sequence or structural similarity /// 46882 // negative regulation of follicle-stimulating hormone secretion // inferred from sequence or structural similarity /// 7165 // signal transduction // traceable author statement /// 45786 // negative regulation of progression through cell cycle // traceable author statement","Gene.Ontology.Cellular.Component":"5576 // extracellular region // inferred from electronic annotation /// 5576 // extracellular region // traceable author statement /// 5576 // extracellular region // inferred from sequence or structural similarity","Gene.Ontology.Molecular.Function":"5125 // cytokine activity // traceable author statement /// 5160 // transforming growth factor beta receptor binding // not recorded /// 5179 // hormone activity // inferred from electronic annotation /// 5179 // hormone activity // traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 8083 // growth factor activity // inferred from electronic annotation /// 8083 // growth factor activity // traceable author statement /// 17106 // activin inhibitor activity // traceable author statement /// 5125 // cytokine activity // inferred from sequence or structural similarity /// 5179 // hormone activity // inferred from sequence or structural similarity /// 5515 // protein binding // inferred from sequence or structural similarity /// 8083 // growth factor activity // inferred from sequence or structural similarity /// 17106 // activin inhibitor activity // inferred from sequence or structural similarity","Pathway":"TGF_Beta_Signaling_Pathway // GenMAPP /// TGF_Beta_Signaling_Pathway // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006887 // Protein of unknown function DUF625 // 1.0E-126 /// IPR001111 // Transforming growth factor beta (TGFb), N-terminal // 2.8E-55 /// IPR001839 // Transforming growth factor beta // 2.8E-65 /// IPR001839 // Transforming growth factor beta // 3.2E-62","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BX648811(10),M13436(11),NM_002192(11)","Transcript.Assignments":"BX648811 // Homo sapiens mRNA; cDNA DKFZp686A06204 (from clone DKFZp686A06204). // gb // 10 // --- /// M13436 // Human ovarian beta-A inhibin mRNA, complete cds. // gb // 11 // --- /// NM_002192 // Homo sapiens inhibin, beta A (activin A, activin AB alpha polypeptide) (INHBA), mRNA. // refseq // 11 // --- /// GENSCAN00000013491 // cdna:Genscan chromosome:NCBI36:7:41663877:41729204:-1 // ensembl_prediction // 9 // --- /// ENST00000242208 // cdna:known-ccds chromosome:NCBI36:7:41695126:41709231:-1 gene:ENSG00000122641 CCDS5464.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9981"}
{"Probe.Set.ID":"204249_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6633806","Target.Description":"gb:NM_005574.2 /DEF=Homo sapiens LIM domain only 2 (rhombotin-like 1) (LMO2), mRNA. /FEA=mRNA /GEN=LMO2 /PROD=LIM domain only 2 /DB_XREF=gi:6633806 /UG=Hs.184585 LIM domain only 2 (rhombotin-like 1) /FL=gb:NM_005574.2","Representative.Public.ID":"NM_005574","Archival.UniGene.Cluster":"Hs.184585","UniGene.ID":"Hs.34560","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:33836700-33870412 (-) // 97.7 // p13","Gene.Title":"LIM domain only 2 (rhombotin-like 1)","Gene.Symbol":"LMO2","Chromosomal.Location":"chr11p13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000135363","Entrez.Gene":"4005","SwissProt":"P25791 /// Q9P1J4","EC":"---","OMIM":"180385","RefSeq.Protein.ID":"NP_005565.1","RefSeq.Transcript.ID":"NM_005574","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7275 // development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from sequence or structural similarity /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 3.2E-14 /// --- // --- // 3.8E-22 /// IPR001781 // Zn-binding protein, LIM // 3.2E-14 /// IPR001781 // Zn-binding protein, LIM // 3.8E-22 /// IPR001781 // Zn-binding protein, LIM // 3.2E-14 /// IPR001781 // Zn-binding protein, LIM // 3.8E-22","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF257211(11),BC042426(11),BC073973(11),NM_005574(11)","Transcript.Assignments":"AF257211 // Homo sapiens LMO2b splice variant (LMO2) mRNA, complete cds. // gb // 11 // --- /// AK127915 // Homo sapiens cDNA FLJ46022 fis, clone SPLEN2021983, highly  similar to Rhombotin-2. // gb // 11 // --- /// BC042426 // Homo sapiens LIM domain only 2 (rhombotin-like 1), mRNA (cDNA clone MGC:34396 IMAGE:5188482), complete cds. // gb // 11 // --- /// BC073973 // Homo sapiens cDNA clone MGC:87978 IMAGE:5734404, complete cds. // gb // 11 // --- /// NM_005574 // Homo sapiens LIM domain only 2 (rhombotin-like 1) (LMO2), mRNA. // refseq // 11 // --- /// ENST00000257818 // cdna:known-ccds chromosome:NCBI36:11:33836701:33870412:-1 gene:ENSG00000135363 CCDS7888.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"3776"}
{"Probe.Set.ID":"204733_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4506154","Target.Description":"gb:NM_002774.1 /DEF=Homo sapiens kallikrein 6 (neurosin, zyme) (KLK6), mRNA. /FEA=mRNA /GEN=KLK6 /PROD=kallikrein 6 (neurosin, zyme) /DB_XREF=gi:4506154 /UG=Hs.79361 kallikrein 6 (neurosin, zyme) /FL=gb:U62801.1 gb:D78203.1 gb:AF013988.1 gb:NM_002774.1","Representative.Public.ID":"NM_002774","Archival.UniGene.Cluster":"Hs.79361","UniGene.ID":"Hs.79361","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr19:56153705-56164741 (-) // 86.59 // q13.33","Gene.Title":"kallikrein 6 (neurosin, zyme)","Gene.Symbol":"KLK6","Chromosomal.Location":"chr19q13.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000167755","Entrez.Gene":"5653","SwissProt":"Q6H301 /// Q6JIA6 /// Q92876","EC":"---","OMIM":"602652","RefSeq.Protein.ID":"NP_001012982.1 /// NP_001012983.1 /// NP_001012984.1 /// NP_002765.1","RefSeq.Transcript.ID":"NM_001012964 /// NM_001012965 /// NM_001012966 /// NM_002774","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6508 // proteolysis // inferred from electronic annotation /// 7417 // central nervous system development // non-traceable author statement /// 9611 // response to wounding // non-traceable author statement /// 16540 // protein autoprocessing // non-traceable author statement /// 30574 // collagen catabolism // non-traceable author statement /// 42246 // tissue regeneration // non-traceable author statement /// 42445 // hormone metabolism // non-traceable author statement /// 42552 // myelination // non-traceable author statement /// 42982 // amyloid precursor protein metabolism // non-traceable author statement /// 45595 // regulation of cell differentiation // non-traceable author statement","Gene.Ontology.Cellular.Component":"5576 // extracellular region // inferred from direct assay /// 5737 // cytoplasm // inferred from direct assay","Gene.Ontology.Molecular.Function":"4252 // serine-type endopeptidase activity // inferred from electronic annotation /// 4293 // tissue kallikrein activity // non-traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 8233 // peptidase activity // inferred from electronic annotation /// 16787 // hydrolase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"ec // MCT1_HUMAN // (P23946) Chymase precursor (EC 3.4.21.39) (Mast cell protease I) // 1.0E-69 /// ec // MCT1_HUMAN // (P23946) Chymase precursor (EC 3.4.21.39) (Mast cell protease I) // 1.0E-37","Protein.Domains":"---","InterPro":"IPR001254 // Peptidase S1, chymotrypsin // 4.6E-92 /// IPR001254 // Peptidase S1, chymotrypsin // 2.2E-54","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001012964(10),NM_001012965(10),NM_001012966(10),NM_002774(10)","Transcript.Assignments":"NM_001012964 // Homo sapiens kallikrein 6 (neurosin, zyme) (KLK6), transcript variant B, mRNA. // refseq // 10 // --- /// NM_002774 // Homo sapiens kallikrein 6 (neurosin, zyme) (KLK6), transcript variant A, mRNA. // refseq // 10 // --- /// NM_001012965 // Homo sapiens kallikrein 6 (neurosin, zyme) (KLK6), transcript variant C, mRNA. // refseq // 10 // --- /// NM_001012966 // Homo sapiens kallikrein 6 (neurosin, zyme) (KLK6), transcript variant D, mRNA. // refseq // 10 // --- /// ENST00000310157 // cdna:known-ccds chromosome:NCBI36:19:56153700:56164741:-1 gene:ENSG00000167755 CCDS12811.1 // ensembl_transcript // 10 // --- /// ENST00000376853 // cdna:known chromosome:NCBI36:19:56153700:56164741:-1 gene:ENSG00000167755 // ensembl_transcript // 10 // --- /// ENST00000376851 // cdna:known chromosome:NCBI36:19:56153700:56164741:-1 gene:ENSG00000167755 // ensembl_transcript // 10 // ---","Annotation.Notes":"DQ223012 // gb // 2 // Cross Hyb Matching Probes /// GENSCAN00000021574 // ensembl_prediction // 1 // Cross Hyb Matching Probes /// GENSCAN00000027291 // ensembl_prediction // 1 // Cross Hyb Matching Probes","_row":"4260"}
{"Probe.Set.ID":"201951_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.10247.0","Target.Description":"Consensus includes gb:BF242905 /FEA=EST /DB_XREF=gi:11156833 /DB_XREF=est:601877949F1 /CLONE=IMAGE:4106028 /UG=Hs.10247 activated leucocyte cell adhesion molecule /FL=gb:NM_001627.1 gb:L38608.1","Representative.Public.ID":"BF242905","Archival.UniGene.Cluster":"Hs.10247","UniGene.ID":"Hs.591293","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:106568811-106778436 (+) // 98.45 // q13.11","Gene.Title":"activated leukocyte cell adhesion molecule","Gene.Symbol":"ALCAM","Chromosomal.Location":"chr3q13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000170017","Entrez.Gene":"214","SwissProt":"Q13740 /// Q6PEY4 /// Q6ZS95","EC":"---","OMIM":"601662","RefSeq.Protein.ID":"NP_001618.2","RefSeq.Transcript.ID":"NM_001627","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7155 // cell adhesion // traceable author statement /// 7165 // signal transduction // traceable author statement /// 19735 // antimicrobial humoral response (sensu Vertebrata) // not recorded /// 7155 // cell adhesion // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // not recorded /// 5887 // integral to plasma membrane // not recorded /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5102 // receptor binding // traceable author statement /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR007110 // Immunoglobulin-like // 0.016 /// IPR007110 // Immunoglobulin-like // 6.6E-5 /// IPR007110 // Immunoglobulin-like // 0.16 /// IPR007110 // Immunoglobulin-like // 0.12 /// IPR007110 // Immunoglobulin-like // 0.11","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001627(11)","Transcript.Assignments":"NM_001627 // Homo sapiens activated leukocyte cell adhesion molecule (ALCAM), mRNA. // refseq // 11 // --- /// ENST00000306107 // cdna:known chromosome:NCBI36:3:106568403:106778433:1 gene:ENSG00000170017 // ensembl_transcript // 11 // ---","Annotation.Notes":"AK095833 // gb // 7 // Cross Hyb Matching Probes","_row":"1479"}
{"Probe.Set.ID":"201952_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.10247.0","Target.Description":"Consensus includes gb:AA156721 /FEA=EST /DB_XREF=gi:1728335 /DB_XREF=est:zl18b04.s1 /CLONE=IMAGE:502255 /UG=Hs.10247 activated leucocyte cell adhesion molecule /FL=gb:NM_001627.1 gb:L38608.1","Representative.Public.ID":"AA156721","Archival.UniGene.Cluster":"Hs.10247","UniGene.ID":"Hs.591293","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:106568811-106778436 (+) // 98.45 // q13.11","Gene.Title":"activated leukocyte cell adhesion molecule","Gene.Symbol":"ALCAM","Chromosomal.Location":"chr3q13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000170017","Entrez.Gene":"214","SwissProt":"Q13740 /// Q6PEY4 /// Q6ZS95","EC":"---","OMIM":"601662","RefSeq.Protein.ID":"NP_001618.2","RefSeq.Transcript.ID":"NM_001627","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7155 // cell adhesion // traceable author statement /// 7165 // signal transduction // traceable author statement /// 19735 // antimicrobial humoral response (sensu Vertebrata) // not recorded /// 7155 // cell adhesion // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // not recorded /// 5887 // integral to plasma membrane // not recorded /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5102 // receptor binding // traceable author statement /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR007110 // Immunoglobulin-like // 0.016 /// IPR007110 // Immunoglobulin-like // 6.6E-5 /// IPR007110 // Immunoglobulin-like // 0.16 /// IPR007110 // Immunoglobulin-like // 0.12 /// IPR007110 // Immunoglobulin-like // 0.11 /// IPR000884 // Thrombospondin, type I // 8.0E-6","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001627(11)","Transcript.Assignments":"NM_001627 // Homo sapiens activated leukocyte cell adhesion molecule (ALCAM), mRNA. // refseq // 11 // --- /// GENSCAN00000038010 // cdna:Genscan chromosome:NCBI36:3:106721601:106778413:1 // ensembl_prediction // 10 // --- /// ENST00000306107 // cdna:known chromosome:NCBI36:3:106568403:106778433:1 gene:ENSG00000170017 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"1480"}
{"Probe.Set.ID":"210066_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1236245","Target.Description":"gb:D63412.1 /DEF=Homo sapiens mRNA for aquaporin, complete cds. /FEA=mRNA /PROD=aquaporin /DB_XREF=gi:1236245 /UG=Hs.288650 aquaporin 4 /FL=gb:D63412.1 gb:U63622.1 gb:U63623.1 gb:NM_001650.2 gb:NM_004028.1","Representative.Public.ID":"D63412","Archival.UniGene.Cluster":"Hs.288650","UniGene.ID":"Hs.315369","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr18:22689420-22699671 (-) // 99.89 // q11.2","Gene.Title":"aquaporin 4","Gene.Symbol":"AQP4","Chromosomal.Location":"chr18q11.2-q12.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000171885","Entrez.Gene":"361","SwissProt":"P55087 /// Q53H97 /// Q59GF3 /// Q6L7A0","EC":"---","OMIM":"600308","RefSeq.Protein.ID":"NP_001641.1 /// NP_004019.1","RefSeq.Transcript.ID":"NM_001650 /// NM_004028","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 6833 // water transport // non-traceable author statement /// 7399 // nervous system development // traceable author statement /// 7588 // excretion // traceable author statement","Gene.Ontology.Cellular.Component":"5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 19867 // outer membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5372 // water transporter activity // non-traceable author statement /// 15250 // water channel activity // not recorded /// 15288 // porin activity // inferred from electronic annotation /// 5372 // water transporter activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000425 // Major intrinsic protein // 3.6E-98 /// IPR000425 // Major intrinsic protein // 1.0E-99 /// IPR000425 // Major intrinsic protein // 1.0E-99 /// IPR000425 // Major intrinsic protein // 3.6E-98","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001650(11),NM_004028(11),U34845(11)","Transcript.Assignments":"U34845 // Human mercurial-insensitive water channel mRNA, form 1, complete cds. // gb // 11 // --- /// U34846 // Human mercurial-insensitive water channel mRNA, form 2, complete cds. // gb // 11 // --- /// NM_004028 // Homo sapiens aquaporin 4 (AQP4), transcript variant b, mRNA. // refseq // 11 // --- /// NM_001650 // Homo sapiens aquaporin 4 (AQP4), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000339532 // cdna:known chromosome:NCBI36:18:22686008:22699714:-1 gene:ENSG00000171885 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9551"}
{"Probe.Set.ID":"210067_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1236245","Target.Description":"gb:D63412.1 /DEF=Homo sapiens mRNA for aquaporin, complete cds. /FEA=mRNA /PROD=aquaporin /DB_XREF=gi:1236245 /UG=Hs.288650 aquaporin 4 /FL=gb:D63412.1 gb:U63622.1 gb:U63623.1 gb:NM_001650.2 gb:NM_004028.1","Representative.Public.ID":"D63412","Archival.UniGene.Cluster":"Hs.288650","UniGene.ID":"Hs.315369","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr18:22689420-22699671 (-) // 99.89 // q11.2","Gene.Title":"aquaporin 4","Gene.Symbol":"AQP4","Chromosomal.Location":"chr18q11.2-q12.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000171885","Entrez.Gene":"361","SwissProt":"P55087 /// Q53H97 /// Q59GF3 /// Q6L7A0","EC":"---","OMIM":"600308","RefSeq.Protein.ID":"NP_001641.1 /// NP_004019.1","RefSeq.Transcript.ID":"NM_001650 /// NM_004028","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 6833 // water transport // non-traceable author statement /// 7399 // nervous system development // traceable author statement /// 7588 // excretion // traceable author statement","Gene.Ontology.Cellular.Component":"5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 19867 // outer membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5372 // water transporter activity // non-traceable author statement /// 15250 // water channel activity // not recorded /// 15288 // porin activity // inferred from electronic annotation /// 5372 // water transporter activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000425 // Major intrinsic protein // 3.6E-98 /// IPR000425 // Major intrinsic protein // 3.6E-98","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001650(11),NM_004028(11)","Transcript.Assignments":"NM_004028 // Homo sapiens aquaporin 4 (AQP4), transcript variant b, mRNA. // refseq // 11 // --- /// NM_001650 // Homo sapiens aquaporin 4 (AQP4), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000339532 // cdna:known chromosome:NCBI36:18:22686008:22699714:-1 gene:ENSG00000171885 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9552"}
{"Probe.Set.ID":"210068_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1680707","Target.Description":"gb:U63622.1 /DEF=Human aquaporin 4 (AQP4) mRNA, complete cds. /FEA=mRNA /GEN=AQP4 /PROD=aquaporin 4 /DB_XREF=gi:1680707 /UG=Hs.288650 aquaporin 4 /FL=gb:D63412.1 gb:U63622.1 gb:U63623.1 gb:NM_001650.2 gb:NM_004028.1","Representative.Public.ID":"U63622","Archival.UniGene.Cluster":"Hs.288650","UniGene.ID":"Hs.315369","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr18:22690031-22699690 (-) // 100.0 // q11.2","Gene.Title":"aquaporin 4","Gene.Symbol":"AQP4","Chromosomal.Location":"chr18q11.2-q12.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000171885","Entrez.Gene":"361","SwissProt":"P55087 /// Q53H97 /// Q59GF3 /// Q6L7A0","EC":"---","OMIM":"600308","RefSeq.Protein.ID":"NP_001641.1 /// NP_004019.1","RefSeq.Transcript.ID":"NM_001650 /// NM_004028","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 6833 // water transport // non-traceable author statement /// 7399 // nervous system development // traceable author statement /// 7588 // excretion // traceable author statement","Gene.Ontology.Cellular.Component":"5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 19867 // outer membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5372 // water transporter activity // non-traceable author statement /// 15250 // water channel activity // not recorded /// 15288 // porin activity // inferred from electronic annotation /// 5372 // water transporter activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000425 // Major intrinsic protein // 3.6E-98 /// IPR000425 // Major intrinsic protein // 1.0E-99 /// IPR000425 // Major intrinsic protein // 1.0E-99 /// IPR000425 // Major intrinsic protein // 3.6E-98","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001650(11),NM_004028(11),U34845(11)","Transcript.Assignments":"U34845 // Human mercurial-insensitive water channel mRNA, form 1, complete cds. // gb // 11 // --- /// U34846 // Human mercurial-insensitive water channel mRNA, form 2, complete cds. // gb // 11 // --- /// NM_004028 // Homo sapiens aquaporin 4 (AQP4), transcript variant b, mRNA. // refseq // 11 // --- /// NM_001650 // Homo sapiens aquaporin 4 (AQP4), transcript variant a, mRNA. // refseq // 11 // --- /// ENST00000339532 // cdna:known chromosome:NCBI36:18:22686008:22699714:-1 gene:ENSG00000171885 // ensembl_transcript // 11 // --- /// ENST00000383168 // cdna:known-ccds chromosome:NCBI36:18:22690173:22699651:-1 gene:ENSG00000171885 CCDS11889.1 // ensembl_transcript // 9 // ---","Annotation.Notes":"GENSCAN00000025652 // ensembl_prediction // 7 // Cross Hyb Matching Probes /// ENST00000383170 // ensembl_transcript // 3 // Cross Hyb Matching Probes","_row":"9553"}
{"Probe.Set.ID":"210906_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1072054","Target.Description":"gb:U34846.1 /DEF=Human mercurial-insensitive water channel mRNA, form 2, complete cds.  /FEA=mRNA /PROD=mercurial-insensitive water channel /DB_XREF=gi:1072054 /UG=Hs.288650 aquaporin 4 /FL=gb:U34846.1","Representative.Public.ID":"U34846","Archival.UniGene.Cluster":"Hs.288650","UniGene.ID":"Hs.315369","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr18:22689475-22699667 (-) // 85.33 // q11.2","Gene.Title":"aquaporin 4","Gene.Symbol":"AQP4","Chromosomal.Location":"chr18q11.2-q12.1","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"361","SwissProt":"P55087 /// Q53H97 /// Q59GF3 /// Q6L7A0","EC":"---","OMIM":"600308","RefSeq.Protein.ID":"NP_001641.1 /// NP_004019.1","RefSeq.Transcript.ID":"NM_001650 /// NM_004028","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 6833 // water transport // non-traceable author statement /// 7399 // nervous system development // traceable author statement /// 7588 // excretion // traceable author statement","Gene.Ontology.Cellular.Component":"5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 19867 // outer membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5215 // transporter activity // inferred from electronic annotation /// 5372 // water transporter activity // non-traceable author statement /// 15250 // water channel activity // not recorded /// 15288 // porin activity // inferred from electronic annotation /// 5372 // water transporter activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000425 // Major intrinsic protein // 1.0E-99 /// IPR000425 // Major intrinsic protein // 1.0E-99","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"U34845(11)","Transcript.Assignments":"U34845 // Human mercurial-insensitive water channel mRNA, form 1, complete cds. // gb // 11 // --- /// U34846 // Human mercurial-insensitive water channel mRNA, form 2, complete cds. // gb // 11 // ---","Annotation.Notes":"NM_004028 // refseq // 7 // Cross Hyb Matching Probes /// NM_001650 // refseq // 7 // Cross Hyb Matching Probes /// GENSCAN00000025652 // ensembl_prediction // 1 // Cross Hyb Matching Probes /// ENST00000339532 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// ENST00000383170 // ensembl_transcript // 1 // Cross Hyb Matching Probes /// ENST00000383168 // ensembl_transcript // 1 // Cross Hyb Matching Probes","_row":"10353"}
{"Probe.Set.ID":"210192_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4704323","Target.Description":"gb:AB013452.1 /DEF=Homo sapiens mRNA for ATPaseII, complete cds. /FEA=mRNA /PROD=ATPaseII /DB_XREF=gi:4704323 /UG=Hs.144931 ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1 /FL=gb:AB013452.1","Representative.Public.ID":"AB013452","Archival.UniGene.Cluster":"Hs.144931","UniGene.ID":"Hs.435052","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:42109391-42353657 (-) // 99.76 // p13","Gene.Title":"ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1","Gene.Symbol":"ATP8A1","Chromosomal.Location":"chr4p14-p12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000124406","Entrez.Gene":"10396","SwissProt":"Q32M35 /// Q32M36 /// Q4G1C1 /// Q59EX4 /// Q9Y2Q0","EC":"EC:3.6.3.1","OMIM":"609542","RefSeq.Protein.ID":"NP_006086.1","RefSeq.Transcript.ID":"NM_006095","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6812 // cation transport // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 15917 // aminophospholipid transport // non-traceable author statement","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // non-traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 5524 // ATP binding // non-traceable author statement /// 16787 // hydrolase activity // inferred from electronic annotation /// 16820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 16887 // ATPase activity // inferred from electronic annotation /// 19829 // cation-transporting ATPase activity // non-traceable author statement /// 3824 // catalytic activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 15662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 15247 // aminophospholipid transporter activity // non-traceable author statement","Pathway":"Peptide_GPCRs // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR008250 // E1-E2 ATPase-associated region // 2.6E-4","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_006095(11)","Transcript.Assignments":"ENSESTT00000047507 // --- // ensembl_est // 11 // --- /// ENSESTT00000047509 // --- // ensembl_est // 11 // --- /// NM_006095 // Homo sapiens ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1 (ATP8A1), mRNA. // refseq // 11 // --- /// ENST00000381668 // cdna:known-ccds chromosome:NCBI36:4:42105147:42353867:-1 gene:ENSG00000124406 CCDS3466.1 // ensembl_transcript // 11 // --- /// ENST00000381662 // cdna:known chromosome:NCBI36:4:42105147:42353867:-1 gene:ENSG00000124406 // ensembl_transcript // 11 // --- /// ENST00000340904 // cdna:known chromosome:NCBI36:4:42109392:42353659:-1 gene:ENSG00000124406 // ensembl_transcript // 11 // --- /// ENST00000264449 // cdna:known chromosome:NCBI36:4:42109392:42353659:-1 gene:ENSG00000124406 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9676"}
{"Probe.Set.ID":"208206_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5031622","Target.Description":"gb:NM_005825.1 /DEF=Homo sapiens RAS guanyl releasing protein 2 (calcium and DAG-regulated) (RASGRP2), mRNA.  /FEA=mRNA /GEN=RASGRP2 /PROD=RAS guanyl releasing protein 2 (calcium andDAG-regulated) /DB_XREF=gi:5031622 /UG=Hs.99491 RAS guanyl releasing protein 2 (calcium and DAG-regulated) /FL=gb:NM_005825.1 gb:AF043723.1","Representative.Public.ID":"NM_005825","Archival.UniGene.Cluster":"Hs.99491","UniGene.ID":"Hs.99491","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:64250959-64269504 (-) // 100.0 // q13.1","Gene.Title":"RAS guanyl releasing protein 2 (calcium and DAG-regulated)","Gene.Symbol":"RASGRP2","Chromosomal.Location":"chr11q13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000068831","Entrez.Gene":"10235","SwissProt":"Q2YDB1 /// Q7LDG7 /// Q9UL65","EC":"---","OMIM":"605577","RefSeq.Protein.ID":"NP_005816.2 /// NP_722541.1","RefSeq.Transcript.ID":"NM_005825 /// NM_153819","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7242 // intracellular signaling cascade // inferred from electronic annotation /// 7264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 51056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 1558 // regulation of cell growth // non-traceable author statement /// 7265 // Ras protein signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5829 // cytosol // inferred from direct assay /// 5886 // plasma membrane // inferred from direct assay /// 5622 // intracellular // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5088 // Ras guanyl-nucleotide exchange factor activity // inferred from expression pattern /// 5085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 5085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 5509 // calcium ion binding // traceable author statement /// 8289 // lipid binding // traceable author statement /// 5509 // calcium ion binding // non-traceable author statement /// 19992 // diacylglycerol binding // non-traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.1E-15 /// --- // --- // 7.3E-6 /// --- // --- // 0.0034 /// --- // --- // 9.3E-34 /// --- // --- // 1.1E-15 /// --- // --- // 7.3E-6 /// --- // --- // 0.0034 /// --- // --- // 9.3E-34 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.1E-15 /// IPR002048 // Calcium-binding EF-hand // 7.3E-6 /// IPR002048 // Calcium-binding EF-hand // 0.0034 /// IPR001895 // Guanine-nucleotide dissociation stimulator CDC25 // 9.3E-34 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.1E-15 /// IPR002048 // Calcium-binding EF-hand // 7.3E-6 /// IPR002048 // Calcium-binding EF-hand // 0.0034 /// IPR001895 // Guanine-nucleotide dissociation stimulator CDC25 // 9.3E-34 /// IPR001895 // Guanine-nucleotide dissociation stimulator CDC25 // 9.3E-34 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.1E-15 /// IPR002048 // Calcium-binding EF-hand // 7.3E-6 /// IPR002048 // Calcium-binding EF-hand // 0.0034","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK092852(10),AK092882(11),BC110306(11),NM_005825(11),NM_153819(11)","Transcript.Assignments":"ENSESTT00000079139 // --- // ensembl_est // 11 // --- /// ENSESTT00000079140 // --- // ensembl_est // 11 // --- /// ENSESTT00000079142 // --- // ensembl_est // 11 // --- /// AK092852 // Homo sapiens cDNA FLJ35533 fis, clone SPLEN2002354, highly similar to H.sapiens mRNA for F25B3.3 kinase like protein. // gb // 10 // --- /// AK092882 // Homo sapiens cDNA FLJ35563 fis, clone SPLEN2005342, highly similar to H.sapiens mRNA for F25B3.3 kinase like protein. // gb // 11 // --- /// BC110306 // Homo sapiens cDNA clone IMAGE:5248659, partial cds. // gb // 11 // --- /// NM_005825 // Homo sapiens RAS guanyl releasing protein 2 (calcium and DAG-regulated) (RASGRP2), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_153819 // Homo sapiens RAS guanyl releasing protein 2 (calcium and DAG-regulated) (RASGRP2), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000320253 // cdna:known chromosome:NCBI36:11:64250959:64269504:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000354024 // cdna:known chromosome:NCBI36:11:64250959:64269504:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377501 // cdna:known chromosome:NCBI36:11:64250959:64269504:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377497 // cdna:known chromosome:NCBI36:11:64250959:64268882:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377494 // cdna:novel chromosome:NCBI36:11:64250959:64267837:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000034782 // ensembl_prediction // 8 // Cross Hyb Matching Probes","_row":"7711"}
{"Probe.Set.ID":"214367_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.99491.2","Target.Description":"Consensus includes gb:AI688812 /FEA=EST /DB_XREF=gi:4900106 /DB_XREF=est:wd41c03.x1 /CLONE=IMAGE:2330692 /UG=Hs.99491 RAS guanyl releasing protein 2 (calcium and DAG-regulated)","Representative.Public.ID":"AI688812","Archival.UniGene.Cluster":"Hs.99491","UniGene.ID":"Hs.99491","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:64264913-64268415 (+) // 92.05 // q13.1","Gene.Title":"RAS guanyl releasing protein 2 (calcium and DAG-regulated)","Gene.Symbol":"RASGRP2","Chromosomal.Location":"chr11q13","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"10235","SwissProt":"Q2YDB1 /// Q7LDG7 /// Q9UL65","EC":"---","OMIM":"605577","RefSeq.Protein.ID":"NP_005816.2 /// NP_722541.1","RefSeq.Transcript.ID":"NM_005825 /// NM_153819","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7242 // intracellular signaling cascade // inferred from electronic annotation /// 7264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 51056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 1558 // regulation of cell growth // non-traceable author statement /// 7265 // Ras protein signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5829 // cytosol // inferred from direct assay /// 5886 // plasma membrane // inferred from direct assay /// 5622 // intracellular // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5088 // Ras guanyl-nucleotide exchange factor activity // inferred from expression pattern /// 5085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 5085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 5509 // calcium ion binding // traceable author statement /// 8289 // lipid binding // traceable author statement /// 5509 // calcium ion binding // non-traceable author statement /// 19992 // diacylglycerol binding // non-traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 11 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AI307533,AW305255,AI611537,AI341515,AI307560,AI660707,AI310570,AI611395,AA035643,AI312334,AI688812","Transcript.Assignments":"AA035643 // zk28b02.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-471819 /clone_end=3' /gb=AA035643 /gi=1507453 /ug=Hs.99491 /len=417 // gb // --- // --- /// AA035643 // /DB_XREF=zk28b02.s1 /CLONE=IMAGE:471819 // gb // --- // --- /// AI307533 // /DB_XREF=tb35c04.x1 /CLONE=IMAGE:2056326 // gb // --- // --- /// AI307560 // tb35f04.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2056351 /clone_end=3' /gb=AI307560 /gi=4002285 /ug=Hs.99491 /len=174 // gb // --- // --- /// AI307560 // /DB_XREF=tb35f04.x1 /CLONE=IMAGE:2056351 // gb // --- // --- /// AI310570 // /DB_XREF=ta76e01.x2 /CLONE=IMAGE:2050008 // gb // --- // --- /// AI312334 // /DB_XREF=ta78f03.x2 /CLONE=IMAGE:2050205 // gb // --- // --- /// AI341515 // qx92b11.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2009949 /clone_end=3' /gb=AI341515 /gi=4078442 /ug=Hs.99491 /len=363 // gb // --- // --- /// AI341515 // /DB_XREF=qx92b11.x1 /CLONE=IMAGE:2009949 // gb // --- // --- /// AI611395 // /DB_XREF=tt67d08.x1 /CLONE=IMAGE:2245839 // gb // --- // --- /// AI611537 // /DB_XREF=tt65f12.x1 /CLONE=IMAGE:2245679 // gb // --- // --- /// AI660707 // wf23h08.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2351487 /clone_end=3' /gb=AI660707 /gi=4764290 /ug=Hs.99491 /len=337 // gb // --- // --- /// AI660707 // /DB_XREF=wf23h08.x1 /CLONE=IMAGE:2351487 // gb // --- // --- /// AI688812 // wd41c03.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2330692 /clone_end=3' /gb=AI688812 /gi=4900106 /ug=Hs.99491 /len=504 // gb // --- // --- /// AI688812 // /DB_XREF=wd41c03.x1 /CLONE=IMAGE:2330692 // gb // --- // --- /// AW305255 // /DB_XREF=xv16d11.x1 /CLONE=IMAGE:2813301 // gb // --- // ---","Annotation.Notes":"ENSESTT00000079137 // ensembl_est // 10 // Negative Strand Matching Probes /// ENSESTT00000079138 // ensembl_est // 9 // Negative Strand Matching Probes /// ENSESTT00000079139 // ensembl_est // 9 // Negative Strand Matching Probes /// ENSESTT00000079140 // ensembl_est // 8 // Negative Strand Matching Probes /// ENSESTT00000079141 // ensembl_est // 8 // Negative Strand Matching Probes /// AK092882 // gb // 8 // Negative Strand Matching Probes /// AK124023 // gb // 11 // Negative Strand Matching Probes /// BC110306 // gb // 8 // Negative Strand Matching Probes /// NM_005825 // refseq // 8 // Negative Strand Matching Probes /// NM_153819 // refseq // 8 // Negative Strand Matching Probes /// GENSCAN00000034782 // ensembl_prediction // 5 // Negative Strand Matching Probes /// ENST00000320253 // ensembl_transcript // 6 // Negative Strand Matching Probes /// ENST00000354024 // ensembl_transcript // 8 // Negative Strand Matching Probes /// ENST00000377501 // ensembl_transcript // 8 // Negative Strand Matching Probes /// ENST00000377497 // ensembl_transcript // 8 // Negative Strand Matching Probes /// ENST00000377494 // ensembl_transcript // 8 // Negative Strand Matching Probes /// ENST00000377489 // ensembl_transcript // 10 // Negative Strand Matching Probes /// ENST00000377487 // ensembl_transcript // 10 // Negative Strand Matching Probes /// ENST00000377486 // ensembl_transcript // 10 // Negative Strand Matching Probes /// ENST00000377485 // ensembl_transcript // 7 // Negative Strand Matching Probes","_row":"13746"}
{"Probe.Set.ID":"214368_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.99491.2","Target.Description":"Consensus includes gb:AI688812 /FEA=EST /DB_XREF=gi:4900106 /DB_XREF=est:wd41c03.x1 /CLONE=IMAGE:2330692 /UG=Hs.99491 RAS guanyl releasing protein 2 (calcium and DAG-regulated)","Representative.Public.ID":"AI688812","Archival.UniGene.Cluster":"Hs.99491","UniGene.ID":"Hs.99491","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:64264913-64268415 (-) // 92.05 // q13.1","Gene.Title":"RAS guanyl releasing protein 2 (calcium and DAG-regulated)","Gene.Symbol":"RASGRP2","Chromosomal.Location":"chr11q13","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"10235","SwissProt":"Q2YDB1 /// Q7LDG7 /// Q9UL65","EC":"---","OMIM":"605577","RefSeq.Protein.ID":"NP_005816.2 /// NP_722541.1","RefSeq.Transcript.ID":"NM_005825 /// NM_153819","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7242 // intracellular signaling cascade // inferred from electronic annotation /// 7264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 51056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 1558 // regulation of cell growth // non-traceable author statement /// 7265 // Ras protein signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5829 // cytosol // inferred from direct assay /// 5886 // plasma membrane // inferred from direct assay /// 5622 // intracellular // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5088 // Ras guanyl-nucleotide exchange factor activity // inferred from expression pattern /// 5085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 5085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 5509 // calcium ion binding // traceable author statement /// 8289 // lipid binding // traceable author statement /// 5509 // calcium ion binding // non-traceable author statement /// 19992 // diacylglycerol binding // non-traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK124023(11)","Transcript.Assignments":"AK124023 // Homo sapiens cDNA FLJ42029 fis, clone SPLEN2036932, highly  similar to Homo sapiens calcium and DAG-regulated guanine nucleotide exchange factor I mRNA. // gb // 11 // ---","Annotation.Notes":"ENSESTT00000079137 // ensembl_est // 5 // Cross Hyb Matching Probes /// ENSESTT00000079138 // ensembl_est // 1 // Cross Hyb Matching Probes /// ENSESTT00000079139 // ensembl_est // 3 // Cross Hyb Matching Probes /// ENSESTT00000079141 // ensembl_est // 5 // Cross Hyb Matching Probes /// ENST00000377489 // ensembl_transcript // 5 // Cross Hyb Matching Probes /// ENST00000377487 // ensembl_transcript // 5 // Cross Hyb Matching Probes /// ENST00000377486 // ensembl_transcript // 5 // Cross Hyb Matching Probes","_row":"13747"}
{"Probe.Set.ID":"214369_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.99491.2","Target.Description":"Consensus includes gb:AI688812 /FEA=EST /DB_XREF=gi:4900106 /DB_XREF=est:wd41c03.x1 /CLONE=IMAGE:2330692 /UG=Hs.99491 RAS guanyl releasing protein 2 (calcium and DAG-regulated)","Representative.Public.ID":"AI688812","Archival.UniGene.Cluster":"Hs.99491","UniGene.ID":"Hs.99491","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:64264913-64268415 (-) // 92.05 // q13.1","Gene.Title":"RAS guanyl releasing protein 2 (calcium and DAG-regulated)","Gene.Symbol":"RASGRP2","Chromosomal.Location":"chr11q13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000068831","Entrez.Gene":"10235","SwissProt":"Q2YDB1 /// Q7LDG7 /// Q9UL65","EC":"---","OMIM":"605577","RefSeq.Protein.ID":"NP_005816.2 /// NP_722541.1","RefSeq.Transcript.ID":"NM_005825 /// NM_153819","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7242 // intracellular signaling cascade // inferred from electronic annotation /// 7264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 51056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 1558 // regulation of cell growth // non-traceable author statement /// 7265 // Ras protein signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5829 // cytosol // inferred from direct assay /// 5886 // plasma membrane // inferred from direct assay /// 5622 // intracellular // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5088 // Ras guanyl-nucleotide exchange factor activity // inferred from expression pattern /// 5085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 5085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 5509 // calcium ion binding // traceable author statement /// 8289 // lipid binding // traceable author statement /// 5509 // calcium ion binding // non-traceable author statement /// 19992 // diacylglycerol binding // non-traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.1E-15 /// --- // --- // 7.3E-6 /// --- // --- // 0.0034 /// --- // --- // 9.3E-34 /// --- // --- // 1.1E-15 /// --- // --- // 7.3E-6 /// --- // --- // 0.0034 /// --- // --- // 9.3E-34 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.1E-15 /// IPR002048 // Calcium-binding EF-hand // 7.3E-6 /// IPR002048 // Calcium-binding EF-hand // 0.0034 /// IPR001895 // Guanine-nucleotide dissociation stimulator CDC25 // 9.3E-34 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.1E-15 /// IPR002048 // Calcium-binding EF-hand // 7.3E-6 /// IPR002048 // Calcium-binding EF-hand // 0.0034 /// IPR001895 // Guanine-nucleotide dissociation stimulator CDC25 // 9.3E-34 /// IPR001895 // Guanine-nucleotide dissociation stimulator CDC25 // 9.3E-34 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 1.1E-15 /// IPR002048 // Calcium-binding EF-hand // 7.3E-6 /// IPR002048 // Calcium-binding EF-hand // 0.0034","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK092882(11),BC110306(11),NM_005825(11),NM_153819(11)","Transcript.Assignments":"ENSESTT00000079137 // --- // ensembl_est // 11 // --- /// ENSESTT00000079138 // --- // ensembl_est // 11 // --- /// ENSESTT00000079139 // --- // ensembl_est // 11 // --- /// ENSESTT00000079140 // --- // ensembl_est // 11 // --- /// ENSESTT00000079141 // --- // ensembl_est // 11 // --- /// AK092882 // Homo sapiens cDNA FLJ35563 fis, clone SPLEN2005342, highly similar to H.sapiens mRNA for F25B3.3 kinase like protein. // gb // 11 // --- /// AK124023 // Homo sapiens cDNA FLJ42029 fis, clone SPLEN2036932, highly  similar to Homo sapiens calcium and DAG-regulated guanine nucleotide exchange factor I mRNA. // gb // 11 // --- /// BC110306 // Homo sapiens cDNA clone IMAGE:5248659, partial cds. // gb // 11 // --- /// NM_005825 // Homo sapiens RAS guanyl releasing protein 2 (calcium and DAG-regulated) (RASGRP2), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_153819 // Homo sapiens RAS guanyl releasing protein 2 (calcium and DAG-regulated) (RASGRP2), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000320253 // cdna:known chromosome:NCBI36:11:64250959:64269504:-1 gene:ENSG00000068831 // ensembl_transcript // 10 // --- /// ENST00000354024 // cdna:known chromosome:NCBI36:11:64250959:64269504:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377501 // cdna:known chromosome:NCBI36:11:64250959:64269504:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377497 // cdna:known chromosome:NCBI36:11:64250959:64268882:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377494 // cdna:novel chromosome:NCBI36:11:64250959:64267837:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377489 // cdna:novel chromosome:NCBI36:11:64264914:64269381:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377487 // cdna:novel chromosome:NCBI36:11:64264914:64268907:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // --- /// ENST00000377486 // cdna:novel chromosome:NCBI36:11:64264914:64268193:-1 gene:ENSG00000068831 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000034782 // ensembl_prediction // 6 // Cross Hyb Matching Probes /// ENST00000377485 // ensembl_transcript // 7 // Cross Hyb Matching Probes","_row":"13748"}
{"Probe.Set.ID":"203710_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g10835022","Target.Description":"gb:NM_002222.1 /DEF=Homo sapiens inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), mRNA.  /FEA=mRNA /GEN=ITPR1 /PROD=inositol 1,4,5-triphosphate receptor, type 1 /DB_XREF=gi:10835022 /UG=Hs.198443 inositol 1,4,5-triphosphate receptor, type 1 /FL=gb:NM_002222.1 gb:D26070.1","Representative.Public.ID":"NM_002222","Archival.UniGene.Cluster":"Hs.198443","UniGene.ID":"Hs.567295","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:4510135-4864081 (+) // 99.77 // p26.2","Gene.Title":"inositol 1,4,5-triphosphate receptor, type 1","Gene.Symbol":"ITPR1","Chromosomal.Location":"chr3p26-p25","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"3708","SwissProt":"Q14643 /// Q59H91","EC":"---","OMIM":"147265","RefSeq.Protein.ID":"NP_002213.1","RefSeq.Transcript.ID":"NM_002222","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6812 // cation transport // inferred from electronic annotation /// 6816 // calcium ion transport // non-traceable author statement /// 7165 // signal transduction // non-traceable author statement /// 6810 // transport // inferred from electronic annotation /// 6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 7165 // signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5789 // endoplasmic reticulum membrane // non-traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // traceable author statement /// 5783 // endoplasmic reticulum // non-traceable author statement","Gene.Ontology.Molecular.Function":"5220 // inositol 1,4,5-triphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 8095 // inositol-1,4,5-triphosphate receptor activity // traceable author statement /// 15085 // calcium ion transporter activity // traceable author statement /// 4872 // receptor activity // inferred from physical interaction /// 4872 // receptor activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5261 // cation channel activity // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 2.1E-101 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84 /// IPR003608 // MIR domain // 1.8E-8 /// IPR003608 // MIR domain // 4.6E-7 /// IPR003608 // MIR domain // 2.6E-8 /// IPR003608 // MIR domain // 4.2E-20","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002222(11)","Transcript.Assignments":"NM_002222 // Homo sapiens inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), mRNA. // refseq // 11 // ---","Annotation.Notes":"---","_row":"3237"}
{"Probe.Set.ID":"211323_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1464750","Target.Description":"gb:L38019.1 /DEF=Homo sapiens (clone HUM-IP3R1) inositol 1,4,5-trisphosphate receptor type 1 mRNA, complete cds.  /FEA=mRNA /GEN=ITPR1 /PROD=inositol 1,4,5-trisphosphate receptor type 1 /DB_XREF=gi:1464750 /UG=Hs.198443 inositol 1,4,5-triphosphate receptor, type 1 /FL=gb:L38019.1","Representative.Public.ID":"L38019","Archival.UniGene.Cluster":"Hs.198443","UniGene.ID":"Hs.567295","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:4510137-4863187 (+) // 99.53 // p26.2","Gene.Title":"inositol 1,4,5-triphosphate receptor, type 1","Gene.Symbol":"ITPR1","Chromosomal.Location":"chr3p26-p25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000150995","Entrez.Gene":"3708","SwissProt":"Q14643 /// Q59H91","EC":"---","OMIM":"147265","RefSeq.Protein.ID":"NP_002213.1","RefSeq.Transcript.ID":"NM_002222","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6812 // cation transport // inferred from electronic annotation /// 6816 // calcium ion transport // non-traceable author statement /// 7165 // signal transduction // non-traceable author statement /// 6810 // transport // inferred from electronic annotation /// 6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 7165 // signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5789 // endoplasmic reticulum membrane // non-traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // traceable author statement /// 5783 // endoplasmic reticulum // non-traceable author statement","Gene.Ontology.Molecular.Function":"5220 // inositol 1,4,5-triphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 8095 // inositol-1,4,5-triphosphate receptor activity // traceable author statement /// 15085 // calcium ion transporter activity // traceable author statement /// 4872 // receptor activity // inferred from physical interaction /// 4872 // receptor activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5261 // cation channel activity // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 2.1E-101 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84 /// IPR003608 // MIR domain // 1.8E-8 /// IPR003608 // MIR domain // 4.6E-7 /// IPR003608 // MIR domain // 2.6E-8 /// IPR003608 // MIR domain // 1.0E-19 /// IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 2.1E-101 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84 /// IPR003608 // MIR domain // 4.2E-20 /// IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84 /// IPR005821 // Ion transport protein // 3.0E-16 /// IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002222(11)","Transcript.Assignments":"ENSESTT00000081344 // --- // ensembl_est // 11 // --- /// ENSESTT00000081345 // --- // ensembl_est // 11 // --- /// ENSESTT00000081346 // --- // ensembl_est // 11 // --- /// NM_002222 // Homo sapiens inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), mRNA. // refseq // 11 // --- /// ENST00000357086 // cdna:known chromosome:NCBI36:3:4510136:4863187:1 gene:ENSG00000150995 // ensembl_transcript // 11 // --- /// ENST00000356617 // cdna:known chromosome:NCBI36:3:4533176:4863432:1 gene:ENSG00000150995 // ensembl_transcript // 11 // --- /// ENST00000302640 // cdna:known chromosome:NCBI36:3:4533176:4863432:1 gene:ENSG00000150995 // ensembl_transcript // 11 // --- /// ENST00000354582 // cdna:novel chromosome:NCBI36:3:4533176:4863432:1 gene:ENSG00000150995 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000010803 // ensembl_prediction // 7 // Cross Hyb Matching Probes","_row":"10742"}
{"Probe.Set.ID":"216944_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.198443.2","Target.Description":"Consensus includes gb:U23850.1 /DEF=Human inositol 1,4,5 trisphosphate receptor type 1 mRNA, partial cds.  /FEA=mRNA /DB_XREF=gi:915324 /UG=Hs.198443 inositol 1,4,5-triphosphate receptor, type 1","Representative.Public.ID":"U23850","Archival.UniGene.Cluster":"Hs.198443","UniGene.ID":"Hs.567295","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:4533175-4863428 (+) // 99.44 // p26.2","Gene.Title":"inositol 1,4,5-triphosphate receptor, type 1","Gene.Symbol":"ITPR1","Chromosomal.Location":"chr3p26-p25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000150995","Entrez.Gene":"3708","SwissProt":"Q14643 /// Q59H91","EC":"---","OMIM":"147265","RefSeq.Protein.ID":"NP_002213.1","RefSeq.Transcript.ID":"NM_002222","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6812 // cation transport // inferred from electronic annotation /// 6816 // calcium ion transport // non-traceable author statement /// 7165 // signal transduction // non-traceable author statement /// 6810 // transport // inferred from electronic annotation /// 6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 7165 // signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5789 // endoplasmic reticulum membrane // non-traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // traceable author statement /// 5783 // endoplasmic reticulum // non-traceable author statement","Gene.Ontology.Molecular.Function":"5220 // inositol 1,4,5-triphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 8095 // inositol-1,4,5-triphosphate receptor activity // traceable author statement /// 15085 // calcium ion transporter activity // traceable author statement /// 4872 // receptor activity // inferred from physical interaction /// 4872 // receptor activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5261 // cation channel activity // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 2.1E-101 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84 /// IPR003608 // MIR domain // 1.8E-8 /// IPR003608 // MIR domain // 4.6E-7 /// IPR003608 // MIR domain // 2.6E-8 /// IPR003608 // MIR domain // 4.2E-20 /// IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 2.1E-101 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84 /// IPR003608 // MIR domain // 1.0E-19 /// IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84 /// IPR005821 // Ion transport protein // 3.0E-16 /// IPR000699 // Intracellular calcium-release channel // 3.8E-84","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002222(11)","Transcript.Assignments":"NM_002222 // Homo sapiens inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), mRNA. // refseq // 11 // --- /// ENST00000356617 // cdna:known chromosome:NCBI36:3:4533176:4863432:1 gene:ENSG00000150995 // ensembl_transcript // 11 // --- /// ENST00000302640 // cdna:known chromosome:NCBI36:3:4533176:4863432:1 gene:ENSG00000150995 // ensembl_transcript // 11 // --- /// ENST00000354582 // cdna:novel chromosome:NCBI36:3:4533176:4863432:1 gene:ENSG00000150995 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"16314"}
{"Probe.Set.ID":"222314_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.205660.1","Target.Description":"Consensus includes gb:AW970881 /FEA=EST /DB_XREF=gi:8160726 /DB_XREF=est:EST382964 /UG=Hs.205660 ESTs","Representative.Public.ID":"AW970881","Archival.UniGene.Cluster":"Hs.205660","UniGene.ID":"Hs.567295","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:4767427-4768239 (-) // 87.1 // p26.2","Gene.Title":"Inositol 1,4,5-triphosphate receptor, type 1","Gene.Symbol":"ITPR1","Chromosomal.Location":"chr3p26-p25","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"3708","SwissProt":"Q14643 /// Q59H91","EC":"---","OMIM":"147265","RefSeq.Protein.ID":"NP_002213.1","RefSeq.Transcript.ID":"NM_002222","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6812 // cation transport // inferred from electronic annotation /// 6816 // calcium ion transport // non-traceable author statement /// 7165 // signal transduction // non-traceable author statement /// 6810 // transport // inferred from electronic annotation /// 6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation /// 6810 // transport // traceable author statement /// 7165 // signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5789 // endoplasmic reticulum membrane // non-traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 5783 // endoplasmic reticulum // traceable author statement /// 5783 // endoplasmic reticulum // non-traceable author statement","Gene.Ontology.Molecular.Function":"5220 // inositol 1,4,5-triphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 8095 // inositol-1,4,5-triphosphate receptor activity // traceable author statement /// 15085 // calcium ion transporter activity // traceable author statement /// 4872 // receptor activity // inferred from physical interaction /// 4872 // receptor activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5261 // cation channel activity // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Genome Target Overlap based pipeline to a UniGene identifier using 1 transcripts. // false // Genome Target Overlap // B","Annotation.Transcript.Cluster":"BC039547","Transcript.Assignments":"ENSESTT00000081353 // --- // ensembl_est // 0 // chr3:4766336-4768274(-) /// BC039547 // Homo sapiens, clone IMAGE:5759947, mRNA. // gb // 0 // chr3:4765879-4768274(-)","Annotation.Notes":"AF144103 // gb // 1 // Cross Hyb Matching Probes /// AY358242 // gb // 1 // Cross Hyb Matching Probes /// AF047185 // gb // 1 // Negative Strand Matching Probes /// AF172929 // gb // 1 // Negative Strand Matching Probes /// AJ420451 // gb // 1 // Negative Strand Matching Probes /// AJ420602 // gb // 1 // Negative Strand Matching Probes /// AL079282 // gb // 1 // Negative Strand Matching Probes /// AL365517 // gb // 1 // Negative Strand Matching Probes","_row":"21673"}
{"Probe.Set.ID":"218059_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7705816","Target.Description":"gb:NM_016096.1 /DEF=Homo sapiens HSPC038 protein (LOC51123), mRNA. /FEA=mRNA /GEN=LOC51123 /PROD=HSPC038 protein /DB_XREF=gi:7705816 /UG=Hs.23528 HSPC038 protein /FL=gb:AF275802.1 gb:AF275809.1 gb:AF125099.1 gb:NM_016096.1","Representative.Public.ID":"NM_016096","Archival.UniGene.Cluster":"Hs.23528","UniGene.ID":"Hs.374485","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:222429485-222430163 (-) // 92.63 // q42.11 /// chr8:102280332-102286974 (-) // 95.83 // q22.3","Gene.Title":"zinc finger protein 706","Gene.Symbol":"ZNF706","Chromosomal.Location":"chr8q22.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000120963","Entrez.Gene":"51123","SwissProt":"Q9HB72 /// Q9Y5V0","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057180.1","RefSeq.Transcript.ID":"NM_016096","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3676 // nucleic acid binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF275809(10),BC015925(10),BC035233(9),NM_016096(10)","Transcript.Assignments":"ENSESTT00000091510 // --- // ensembl_est // 9 // --- /// ENSESTT00000091511 // --- // ensembl_est // 9 // --- /// BC035233 // Homo sapiens zinc finger protein 706, mRNA (cDNA clone IMAGE:4822271), with apparent retained intron. // gb // 9 // --- /// AF275809 // Homo sapiens PNAS-113 mRNA, complete cds. // gb // 10 // --- /// BC015925 // Homo sapiens zinc finger protein 706, mRNA (cDNA clone MGC:8728 IMAGE:3909510), complete cds. // gb // 10 // --- /// NM_016096 // Homo sapiens zinc finger protein 706 (ZNF706), mRNA. // refseq // 10 // --- /// ENST00000311212 // cdna:known-ccds chromosome:NCBI36:8:102278464:102287020:-1 gene:ENSG00000120963 CCDS6291.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000037847 // ensembl_prediction // 5 // Cross Hyb Matching Probes /// GENSCAN00000048251 // ensembl_prediction // 2 // Cross Hyb Matching Probes /// ENST00000305782 // ensembl_transcript // 4 // Cross Hyb Matching Probes","_row":"17424.1"}
{"Probe.Set.ID":"207776_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4502532","Target.Description":"gb:NM_000724.1 /DEF=Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), mRNA.  /FEA=mRNA /GEN=CACNB2 /PROD=calcium channel, voltage-dependent, beta 2subunit /DB_XREF=gi:4502532 /UG=Hs.30941 calcium channel, voltage-dependent, beta 2 subunit /FL=gb:U95019.1 gb:NM_000724.1 gb:AF137377.1","Representative.Public.ID":"NM_000724","Archival.UniGene.Cluster":"Hs.30941","UniGene.ID":"Hs.59093","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:18589703-18869308 (+) // 98.89 // p12.33","Gene.Title":"calcium channel, voltage-dependent, beta 2 subunit","Gene.Symbol":"CACNB2","Chromosomal.Location":"chr10p12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000165995","Entrez.Gene":"783","SwissProt":"Q08289 /// Q59H42 /// Q5QJ99 /// Q5QJA0 /// Q5UM67 /// Q5UM68 /// Q6TME0 /// Q6TME1 /// Q6TME2 /// Q6TME3","EC":"---","OMIM":"600003","RefSeq.Protein.ID":"NP_000715.1 /// NP_963864.1 /// NP_963865.1 /// NP_963866.1 /// NP_963884.1 /// NP_963887.1 /// NP_963890.1 /// NP_963891.1","RefSeq.Transcript.ID":"NM_000724 /// NM_201570 /// NM_201571 /// NM_201572 /// NM_201590 /// NM_201593 /// NM_201596 /// NM_201597","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // non-traceable author statement /// 7528 // neuromuscular junction development // traceable author statement /// 6810 // transport // inferred from electronic annotation /// 6810 // transport // traceable author statement","Gene.Ontology.Cellular.Component":"5891 // voltage-gated calcium channel complex // traceable author statement /// 5887 // integral to plasma membrane // non-traceable author statement","Gene.Ontology.Molecular.Function":"5245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 5245 // voltage-gated calcium channel activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5244 // voltage-gated ion channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // non-traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 8 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000724(11),NM_201570(11),NM_201571(11),NM_201572(11),NM_201590(11),NM_201593(11),NM_201596(11),NM_201597(11)","Transcript.Assignments":"NM_201572 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 8, mRNA. // refseq // 11 // --- /// NM_201593 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 5, mRNA. // refseq // 11 // --- /// NM_201571 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 6, mRNA. // refseq // 11 // --- /// NM_201596 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_201597 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 4, mRNA. // refseq // 11 // --- /// NM_201590 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_201570 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 7, mRNA. // refseq // 11 // --- /// NM_000724 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000324631 // cdna:known-ccds chromosome:NCBI36:10:18469612:18870062:1 gene:ENSG00000165995 CCDS7125.1 // ensembl_transcript // 11 // --- /// ENST00000282343 // cdna:known-ccds chromosome:NCBI36:10:18469893:18870062:1 gene:ENSG00000165995 CCDS7127.1 // ensembl_transcript // 11 // --- /// ENST00000377319 // cdna:known-ccds chromosome:NCBI36:10:18589704:18870797:1 gene:ENSG00000165995 CCDS7128.1 // ensembl_transcript // 11 // --- /// ENST00000377318 // cdna:known chromosome:NCBI36:10:18589704:18870062:1 gene:ENSG00000165995 // ensembl_transcript // 11 // --- /// ENST00000340194 // cdna:known chromosome:NCBI36:10:18590196:18870062:1 gene:ENSG00000165995 // ensembl_transcript // 11 // --- /// ENST00000352115 // cdna:known-ccds chromosome:NCBI36:10:18729748:18870062:1 gene:ENSG00000165995 CCDS7129.1 // ensembl_transcript // 11 // --- /// ENST00000340232 // cdna:known chromosome:NCBI36:10:18729967:18870044:1 gene:ENSG00000165995 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"7297"}
{"Probe.Set.ID":"213714_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.30941.1","Target.Description":"Consensus includes gb:AI040163 /FEA=EST /DB_XREF=gi:3279357 /DB_XREF=est:ox42c02.s1 /CLONE=IMAGE:1658978 /UG=Hs.30941 calcium channel, voltage-dependent, beta 2 subunit /FL=gb:AF137376.1","Representative.Public.ID":"AI040163","Archival.UniGene.Cluster":"Hs.30941","UniGene.ID":"Hs.59093","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:18469611-18870045 (+) // 97.25 // p12.33","Gene.Title":"calcium channel, voltage-dependent, beta 2 subunit","Gene.Symbol":"CACNB2","Chromosomal.Location":"chr10p12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000165995","Entrez.Gene":"783","SwissProt":"Q08289 /// Q59H42 /// Q5QJ99 /// Q5QJA0 /// Q5UM67 /// Q5UM68 /// Q6TME0 /// Q6TME1 /// Q6TME2 /// Q6TME3","EC":"---","OMIM":"600003","RefSeq.Protein.ID":"NP_000715.1 /// NP_963864.1 /// NP_963865.1 /// NP_963866.1 /// NP_963884.1 /// NP_963887.1 /// NP_963890.1 /// NP_963891.1","RefSeq.Transcript.ID":"NM_000724 /// NM_201570 /// NM_201571 /// NM_201572 /// NM_201590 /// NM_201593 /// NM_201596 /// NM_201597","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // non-traceable author statement /// 7528 // neuromuscular junction development // traceable author statement /// 6810 // transport // inferred from electronic annotation /// 6810 // transport // traceable author statement","Gene.Ontology.Cellular.Component":"5891 // voltage-gated calcium channel complex // traceable author statement /// 5887 // integral to plasma membrane // non-traceable author statement","Gene.Ontology.Molecular.Function":"5245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 5245 // voltage-gated calcium channel activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5244 // voltage-gated ion channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // non-traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// --- // --- // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126 /// IPR000584 // Dihydropyridine sensitive L-type calcium channel, beta subunit // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 8 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000724(11),NM_201570(11),NM_201571(11),NM_201572(11),NM_201590(11),NM_201593(11),NM_201596(11),NM_201597(11)","Transcript.Assignments":"NM_201572 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 8, mRNA. // refseq // 11 // --- /// NM_201593 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 5, mRNA. // refseq // 11 // --- /// NM_201571 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 6, mRNA. // refseq // 11 // --- /// NM_201596 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_201597 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 4, mRNA. // refseq // 11 // --- /// NM_201590 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_201570 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 7, mRNA. // refseq // 11 // --- /// NM_000724 // Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000324631 // cdna:known-ccds chromosome:NCBI36:10:18469612:18870062:1 gene:ENSG00000165995 CCDS7125.1 // ensembl_transcript // 11 // --- /// ENST00000282343 // cdna:known-ccds chromosome:NCBI36:10:18469893:18870062:1 gene:ENSG00000165995 CCDS7127.1 // ensembl_transcript // 11 // --- /// ENST00000377319 // cdna:known-ccds chromosome:NCBI36:10:18589704:18870797:1 gene:ENSG00000165995 CCDS7128.1 // ensembl_transcript // 11 // --- /// ENST00000377318 // cdna:known chromosome:NCBI36:10:18589704:18870062:1 gene:ENSG00000165995 // ensembl_transcript // 11 // --- /// ENST00000340194 // cdna:known chromosome:NCBI36:10:18590196:18870062:1 gene:ENSG00000165995 // ensembl_transcript // 11 // --- /// ENST00000352115 // cdna:known-ccds chromosome:NCBI36:10:18729748:18870062:1 gene:ENSG00000165995 CCDS7129.1 // ensembl_transcript // 11 // --- /// ENST00000340232 // cdna:known chromosome:NCBI36:10:18729967:18870044:1 gene:ENSG00000165995 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"13094"}
{"Probe.Set.ID":"215365_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.287522.0","Target.Description":"Consensus includes gb:AK022426.1 /DEF=Homo sapiens cDNA FLJ12364 fis, clone MAMMA1002384. /FEA=mRNA /DB_XREF=gi:10433820 /UG=Hs.287522 Homo sapiens cDNA FLJ12364 fis, clone MAMMA1002384","Representative.Public.ID":"AK022426","Archival.UniGene.Cluster":"Hs.287522","UniGene.ID":"Hs.59093","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:18625524-18627304 (+) // 52.88 // p12.33","Gene.Title":"calcium channel, voltage-dependent, beta 2 subunit","Gene.Symbol":"CACNB2","Chromosomal.Location":"chr10p12","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"783","SwissProt":"Q08289 /// Q59H42 /// Q5QJ99 /// Q5QJA0 /// Q5UM67 /// Q5UM68 /// Q6TME0 /// Q6TME1 /// Q6TME2 /// Q6TME3","EC":"---","OMIM":"600003","RefSeq.Protein.ID":"NP_000715.1 /// NP_963864.1 /// NP_963865.1 /// NP_963866.1 /// NP_963884.1 /// NP_963887.1 /// NP_963890.1 /// NP_963891.1","RefSeq.Transcript.ID":"NM_000724 /// NM_201570 /// NM_201571 /// NM_201572 /// NM_201590 /// NM_201593 /// NM_201596 /// NM_201597","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // non-traceable author statement /// 7528 // neuromuscular junction development // traceable author statement /// 6810 // transport // inferred from electronic annotation /// 6810 // transport // traceable author statement","Gene.Ontology.Cellular.Component":"5891 // voltage-gated calcium channel complex // traceable author statement /// 5887 // integral to plasma membrane // non-traceable author statement","Gene.Ontology.Molecular.Function":"5245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 5245 // voltage-gated calcium channel activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5244 // voltage-gated ion channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // non-traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK022426(11)","Transcript.Assignments":"AK022426 // Homo sapiens cDNA FLJ12364 fis, clone MAMMA1002384. // gb // 11 // ---","Annotation.Notes":"---","_row":"14739"}
{"Probe.Set.ID":"207713_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5454167","Target.Description":"gb:NM_006462.1 /DEF=Homo sapiens HBV associated factor (XAP4), mRNA. /FEA=mRNA /GEN=XAP4 /PROD=HBV associated factor /DB_XREF=gi:5454167 /UG=Hs.247280 HBV associated factor /FL=gb:NM_006462.1","Representative.Public.ID":"NM_006462","Archival.UniGene.Cluster":"Hs.247280","UniGene.ID":"Hs.247280","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr20:336814-359604 (+) // 98.35 // p13","Gene.Title":"chromosome 20 open reading frame 18","Gene.Symbol":"C20orf18","Chromosomal.Location":"chr20p13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000125826","Entrez.Gene":"10616","SwissProt":"Q86SL2 /// Q9BYM8","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_006453.1 /// NP_112506.1","RefSeq.Transcript.ID":"NM_006462 /// NM_031229","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6512 // ubiquitin cycle // inferred from electronic annotation /// 6464 // protein modification // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001876 // Zn-finger, Ran-binding // 3.8E-5 /// IPR001841 // Zn-finger, RING // 2.1E-9 /// IPR001876 // Zn-finger, Ran-binding // 3.8E-5 /// IPR001841 // Zn-finger, RING // 2.1E-9","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC015219(11),CR608145(11),NM_006462(11),NM_031229(11)","Transcript.Assignments":"ENSESTT00000086494 // --- // ensembl_est // 11 // --- /// ENSESTT00000086496 // --- // ensembl_est // 11 // --- /// ENSESTT00000086497 // --- // ensembl_est // 11 // --- /// CR608145 // full-length cDNA clone CS0DI082YL07 of Placenta Cot 25-normalized of Homo sapiens (human). // gb // 11 // --- /// BC015219 // Homo sapiens chromosome 20 open reading frame 18, transcript variant 2, mRNA (cDNA clone MGC:17759 IMAGE:3877587), complete cds. // gb // 11 // --- /// NM_006462 // Homo sapiens chromosome 20 open reading frame 18 (C20orf18), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_031229 // Homo sapiens chromosome 20 open reading frame 18 (C20orf18), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000382214 // cdna:known chromosome:NCBI36:20:336694:359610:1 gene:ENSG00000125826 // ensembl_transcript // 11 // --- /// ENST00000382181 // cdna:known chromosome:NCBI36:20:336694:359608:1 gene:ENSG00000125826 // ensembl_transcript // 11 // --- /// ENST00000382178 // cdna:known-ccds chromosome:NCBI36:20:336694:359608:1 gene:ENSG00000125826 CCDS13001.1 // ensembl_transcript // 11 // --- /// ENST00000290048 // cdna:known-ccds chromosome:NCBI36:20:336694:359608:1 gene:ENSG00000125826 CCDS12999.1 // ensembl_transcript // 11 // --- /// ENST00000356286 // cdna:known-ccds chromosome:NCBI36:20:336756:359610:1 gene:ENSG00000125826 CCDS13000.1 // ensembl_transcript // 11 // --- /// ENST00000353660 // cdna:known-ccds chromosome:NCBI36:20:336756:359610:1 gene:ENSG00000125826 CCDS12998.1 // ensembl_transcript // 11 // --- /// ENST00000382154 // cdna:known chromosome:NCBI36:20:336756:359610:1 gene:ENSG00000125826 // ensembl_transcript // 11 // --- /// ENST00000345091 // cdna:known chromosome:NCBI36:20:336756:359610:1 gene:ENSG00000125826 // ensembl_transcript // 11 // --- /// ENST00000382144 // cdna:known chromosome:NCBI36:20:336815:359610:1 gene:ENSG00000125826 // ensembl_transcript // 11 // --- /// ENST00000382139 // cdna:known chromosome:NCBI36:20:336999:359610:1 gene:ENSG00000125826 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"7234"}
{"Probe.Set.ID":"221827_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.247280.3","Target.Description":"Consensus includes gb:BE788439 /FEA=EST /DB_XREF=gi:10209637 /DB_XREF=est:601475616F1 /CLONE=IMAGE:3878643 /UG=Hs.247280 HBV associated factor","Representative.Public.ID":"BE788439","Archival.UniGene.Cluster":"Hs.247280","UniGene.ID":"Hs.247280","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr20:336965-339168 (+) // 61.34 // p13","Gene.Title":"chromosome 20 open reading frame 18","Gene.Symbol":"C20orf18","Chromosomal.Location":"chr20p13","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"10616","SwissProt":"Q86SL2 /// Q9BYM8","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_006453.1 /// NP_112506.1","RefSeq.Transcript.ID":"NM_006462 /// NM_031229","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6512 // ubiquitin cycle // inferred from electronic annotation /// 6464 // protein modification // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC016301(11)","Transcript.Assignments":"BC016301 // Homo sapiens chromosome 20 open reading frame 18, mRNA (cDNA clone IMAGE:3639991), partial cds. // gb // 11 // ---","Annotation.Notes":"---","_row":"21187"}
{"Probe.Set.ID":"211075_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g396704","Target.Description":"gb:Z25521.1 /DEF=H.sapiens integrin associated protein mRNA, complete CDS,. /FEA=mRNA /PROD=integrin associated protein /DB_XREF=gi:396704 /FL=gb:Z25521.1","Representative.Public.ID":"Z25521","Archival.UniGene.Cluster":"--- /// Hs.901122","UniGene.ID":"Hs.446414","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:109248616-109292584 (-) // 90.71 // q13.12","Gene.Title":"CD47 molecule /// CD47 molecule","Gene.Symbol":"CD47","Chromosomal.Location":"chr3q13.1-q13.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000196776","Entrez.Gene":"961","SwissProt":"Q08722","EC":"---","OMIM":"601028","RefSeq.Protein.ID":"NP_001020250.1 /// NP_001768.1 /// NP_942088.1","RefSeq.Transcript.ID":"NM_001025079 /// NM_001777 /// NM_198793","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7155 // cell adhesion // inferred from electronic annotation /// 7160 // cell-matrix adhesion // not recorded /// 7229 // integrin-mediated signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006704 // CD47 integrin associated protein // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001025079(11),NM_001777(11),NM_198793(11)","Transcript.Assignments":"ENSESTT00000062236 // --- // ensembl_est // 11 // --- /// ENSESTT00000062237 // --- // ensembl_est // 11 // --- /// ENSESTT00000062238 // --- // ensembl_est // 11 // --- /// ENSESTT00000062239 // --- // ensembl_est // 11 // --- /// ENSESTT00000062240 // --- // ensembl_est // 11 // --- /// ENSESTT00000062241 // --- // ensembl_est // 11 // --- /// NM_001777 // Homo sapiens CD47 molecule (CD47), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_198793 // Homo sapiens CD47 molecule (CD47), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_001025079 // Homo sapiens CD47 molecule (CD47), transcript variant 3, mRNA. // refseq // 11 // --- /// ENST00000355354 // cdna:known chromosome:NCBI36:3:109244631:109292625:-1 gene:ENSG00000196776 // ensembl_transcript // 11 // --- /// ENST00000361309 // cdna:known chromosome:NCBI36:3:109244631:109292625:-1 gene:ENSG00000196776 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000009694 // ensembl_prediction // 6 // Cross Hyb Matching Probes","_row":"10519"}
{"Probe.Set.ID":"213055_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.82685.2","Target.Description":"Consensus includes gb:BF693956 /FEA=EST /DB_XREF=gi:11979364 /DB_XREF=est:602082535F1 /CLONE=IMAGE:4246664 /UG=Hs.82685 CD47 antigen (Rh-related antigen, integrin-associated signal transducer)","Representative.Public.ID":"BF693956","Archival.UniGene.Cluster":"Hs.82685","UniGene.ID":"Hs.446414","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:109247343-109281786 (-) // 99.51 // q13.12","Gene.Title":"CD47 molecule","Gene.Symbol":"CD47","Chromosomal.Location":"chr3q13.1-q13.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000196776","Entrez.Gene":"961","SwissProt":"Q08722","EC":"---","OMIM":"601028","RefSeq.Protein.ID":"NP_001020250.1 /// NP_001768.1 /// NP_942088.1","RefSeq.Transcript.ID":"NM_001025079 /// NM_001777 /// NM_198793","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7155 // cell adhesion // inferred from electronic annotation /// 7160 // cell-matrix adhesion // not recorded /// 7229 // integrin-mediated signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006704 // CD47 integrin associated protein // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL832675(11),NM_001025079(11),NM_001777(11),NM_198793(11)","Transcript.Assignments":"AL832675 // Homo sapiens mRNA; cDNA DKFZp313F0317 (from clone DKFZp313F0317). // gb // 11 // --- /// NM_001777 // Homo sapiens CD47 molecule (CD47), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_198793 // Homo sapiens CD47 molecule (CD47), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_001025079 // Homo sapiens CD47 molecule (CD47), transcript variant 3, mRNA. // refseq // 11 // --- /// ENST00000355354 // cdna:known chromosome:NCBI36:3:109244631:109292625:-1 gene:ENSG00000196776 // ensembl_transcript // 11 // --- /// ENST00000361309 // cdna:known chromosome:NCBI36:3:109244631:109292625:-1 gene:ENSG00000196776 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"12438"}
{"Probe.Set.ID":"213856_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.82685.1","Target.Description":"Consensus includes gb:BG230614 /FEA=EST /DB_XREF=gi:12725656 /DB_XREF=est:naf41b12.x1 /CLONE=IMAGE:4143335 /UG=Hs.82685 CD47 antigen (Rh-related antigen, integrin-associated signal transducer)","Representative.Public.ID":"BG230614","Archival.UniGene.Cluster":"Hs.82685","UniGene.ID":"Hs.446414","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:109248615-109249454 (-) // 94.59 // q13.12","Gene.Title":"CD47 molecule","Gene.Symbol":"CD47","Chromosomal.Location":"chr3q13.1-q13.2","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"961","SwissProt":"Q08722","EC":"---","OMIM":"601028","RefSeq.Protein.ID":"NP_001020250.1 /// NP_001768.1 /// NP_942088.1","RefSeq.Transcript.ID":"NM_001025079 /// NM_001777 /// NM_198793","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7155 // cell adhesion // inferred from electronic annotation /// 7160 // cell-matrix adhesion // not recorded /// 7229 // integrin-mediated signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC042889(11)","Transcript.Assignments":"BC042889 // Homo sapiens CD47 antigen (Rh-related antigen, integrin-associated signal transducer), mRNA (cDNA clone IMAGE:4822825). // gb // 11 // ---","Annotation.Notes":"---","_row":"13236"}
{"Probe.Set.ID":"213857_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.82685.1","Target.Description":"Consensus includes gb:BG230614 /FEA=EST /DB_XREF=gi:12725656 /DB_XREF=est:naf41b12.x1 /CLONE=IMAGE:4143335 /UG=Hs.82685 CD47 antigen (Rh-related antigen, integrin-associated signal transducer)","Representative.Public.ID":"BG230614","Archival.UniGene.Cluster":"Hs.82685","UniGene.ID":"Hs.446414","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:109248615-109249454 (-) // 94.59 // q13.12","Gene.Title":"CD47 molecule","Gene.Symbol":"CD47","Chromosomal.Location":"chr3q13.1-q13.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000196776","Entrez.Gene":"961","SwissProt":"Q08722","EC":"---","OMIM":"601028","RefSeq.Protein.ID":"NP_001020250.1 /// NP_001768.1 /// NP_942088.1","RefSeq.Transcript.ID":"NM_001025079 /// NM_001777 /// NM_198793","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7155 // cell adhesion // inferred from electronic annotation /// 7160 // cell-matrix adhesion // not recorded /// 7229 // integrin-mediated signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006704 // CD47 integrin associated protein // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL832675(11),BC042889(11),NM_001025079(11),NM_001777(11),NM_198793(11)","Transcript.Assignments":"ENSESTT00000062236 // --- // ensembl_est // 11 // --- /// ENSESTT00000062237 // --- // ensembl_est // 11 // --- /// ENSESTT00000062239 // --- // ensembl_est // 11 // --- /// ENSESTT00000062240 // --- // ensembl_est // 11 // --- /// AL832675 // Homo sapiens mRNA; cDNA DKFZp313F0317 (from clone DKFZp313F0317). // gb // 11 // --- /// BC042889 // Homo sapiens CD47 antigen (Rh-related antigen, integrin-associated signal transducer), mRNA (cDNA clone IMAGE:4822825). // gb // 11 // --- /// NM_001777 // Homo sapiens CD47 molecule (CD47), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_198793 // Homo sapiens CD47 molecule (CD47), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_001025079 // Homo sapiens CD47 molecule (CD47), transcript variant 3, mRNA. // refseq // 11 // --- /// ENST00000355354 // cdna:known chromosome:NCBI36:3:109244631:109292625:-1 gene:ENSG00000196776 // ensembl_transcript // 11 // --- /// ENST00000361309 // cdna:known chromosome:NCBI36:3:109244631:109292625:-1 gene:ENSG00000196776 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000062238 // ensembl_est // 5 // Cross Hyb Matching Probes /// ENSESTT00000062241 // ensembl_est // 5 // Cross Hyb Matching Probes","_row":"13237"}
{"Probe.Set.ID":"206013_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g11761635","Target.Description":"gb:NM_016188.2 /DEF=Homo sapiens actin-like 6 (ACTL6), mRNA. /FEA=mRNA /GEN=ACTL6 /PROD=BAF53b /DB_XREF=gi:11761635 /UG=Hs.259831 actin-like 6 /FL=gb:NM_016188.2 gb:AB015906.1 gb:AF041475.1","Representative.Public.ID":"NM_016188","Archival.UniGene.Cluster":"Hs.259831","UniGene.ID":"Hs.259831","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr7:100078663-100091986 (-) // 99.87 // q22.1","Gene.Title":"actin-like 6B","Gene.Symbol":"ACTL6B","Chromosomal.Location":"chr7q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000077080","Entrez.Gene":"51412","SwissProt":"O94805 /// Q13552","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057272.1","RefSeq.Transcript.ID":"NM_016188","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6325 // establishment and/or maintenance of chromatin architecture // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from direct assay /// 5884 // actin filament // inferred from electronic annotation /// 16514 // SWI/SNF complex // inferred from sequence or structural similarity /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5200 // structural constituent of cytoskeleton // traceable author statement /// 5515 // protein binding // inferred from sequence or structural similarity /// 5524 // ATP binding // inferred from electronic annotation /// 5200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR004000 // Actin/actin-like // 1.4E-39 /// IPR004000 // Actin/actin-like // 3.0E-47","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_016188(11)","Transcript.Assignments":"ENSESTT00000097632 // --- // ensembl_est // 11 // --- /// ENSESTT00000097633 // --- // ensembl_est // 11 // --- /// NM_016188 // Homo sapiens actin-like 6B (ACTL6B), mRNA. // refseq // 11 // --- /// GENSCAN00000015399 // cdna:Genscan chromosome:NCBI36:7:100056416:100084483:-1 // ensembl_prediction // 11 // --- /// ENST00000160382 // cdna:known-ccds chromosome:NCBI36:7:100078678:100092007:-1 gene:ENSG00000077080 CCDS5702.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"5540"}
{"Probe.Set.ID":"206014_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g11761635","Target.Description":"gb:NM_016188.2 /DEF=Homo sapiens actin-like 6 (ACTL6), mRNA. /FEA=mRNA /GEN=ACTL6 /PROD=BAF53b /DB_XREF=gi:11761635 /UG=Hs.259831 actin-like 6 /FL=gb:NM_016188.2 gb:AB015906.1 gb:AF041475.1","Representative.Public.ID":"NM_016188","Archival.UniGene.Cluster":"Hs.259831","UniGene.ID":"Hs.259831","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr7:100078663-100091986 (-) // 99.87 // q22.1","Gene.Title":"actin-like 6B","Gene.Symbol":"ACTL6B","Chromosomal.Location":"chr7q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000077080","Entrez.Gene":"51412","SwissProt":"O94805 /// Q13552","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057272.1","RefSeq.Transcript.ID":"NM_016188","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6325 // establishment and/or maintenance of chromatin architecture // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from direct assay /// 5884 // actin filament // inferred from electronic annotation /// 16514 // SWI/SNF complex // inferred from sequence or structural similarity /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5200 // structural constituent of cytoskeleton // traceable author statement /// 5515 // protein binding // inferred from sequence or structural similarity /// 5524 // ATP binding // inferred from electronic annotation /// 5200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR004000 // Actin/actin-like // 1.4E-39 /// IPR004000 // Actin/actin-like // 3.0E-47","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_016188(11)","Transcript.Assignments":"ENSESTT00000097632 // --- // ensembl_est // 11 // --- /// ENSESTT00000097633 // --- // ensembl_est // 11 // --- /// NM_016188 // Homo sapiens actin-like 6B (ACTL6B), mRNA. // refseq // 11 // --- /// ENST00000160382 // cdna:known-ccds chromosome:NCBI36:7:100078678:100092007:-1 gene:ENSG00000077080 CCDS5702.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"5541"}
{"Probe.Set.ID":"216978_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.121485.0","Target.Description":"Consensus includes gb:U50277.1 /DEF=Human breast cancer suppressor element Ishmael Upper CP1 mRNA, partial cds.  /FEA=mRNA /PROD=suppressor element Ishmael Upper CP1 /DB_XREF=gi:1224126 /UG=Hs.121485 Human breast cancer suppressor element Ishmael Upper CP1 mRNA, partial cds","Representative.Public.ID":"U50277","Archival.UniGene.Cluster":"Hs.121485","UniGene.ID":"Hs.259831","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"---","Gene.Title":"Actin-like 6B","Gene.Symbol":"ACTL6B","Chromosomal.Location":"chr7q22","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"51412","SwissProt":"O94805 /// Q13552","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057272.1","RefSeq.Transcript.ID":"NM_016188","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6325 // establishment and/or maintenance of chromatin architecture // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from direct assay /// 5884 // actin filament // inferred from electronic annotation /// 16514 // SWI/SNF complex // inferred from sequence or structural similarity /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5200 // structural constituent of cytoskeleton // traceable author statement /// 5515 // protein binding // inferred from sequence or structural similarity /// 5524 // ATP binding // inferred from electronic annotation /// 5200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 1 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"U50277","Transcript.Assignments":"U50277 // Human breast cancer suppressor element Ishmael Upper CP1 mRNA, partial cds /cds=(0,95) /gb=U50277 /gi=1224126 /ug=Hs.121485 /len=132 // gb // --- // --- /// U50277 // /DEF=Human breast cancer suppressor element Ishmael Upper CP1 mRNA, partial cds.  /PROD=suppressor element Ishmael Upper CP1 // gb // --- // ---","Annotation.Notes":"---","_row":"16348"}
{"Probe.Set.ID":"216982_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.121485.0","Target.Description":"Consensus includes gb:U50277.1 /DEF=Human breast cancer suppressor element Ishmael Upper CP1 mRNA, partial cds.  /FEA=mRNA /PROD=suppressor element Ishmael Upper CP1 /DB_XREF=gi:1224126 /UG=Hs.121485 Human breast cancer suppressor element Ishmael Upper CP1 mRNA, partial cds","Representative.Public.ID":"U50277","Archival.UniGene.Cluster":"Hs.121485","UniGene.ID":"Hs.259831","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"---","Gene.Title":"Actin-like 6B","Gene.Symbol":"ACTL6B","Chromosomal.Location":"chr7q22","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"51412","SwissProt":"O94805 /// Q13552","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057272.1","RefSeq.Transcript.ID":"NM_016188","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6325 // establishment and/or maintenance of chromatin architecture // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from direct assay /// 5884 // actin filament // inferred from electronic annotation /// 16514 // SWI/SNF complex // inferred from sequence or structural similarity /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5200 // structural constituent of cytoskeleton // traceable author statement /// 5515 // protein binding // inferred from sequence or structural similarity /// 5524 // ATP binding // inferred from electronic annotation /// 5200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"U50277(11)","Transcript.Assignments":"U50277 // Human breast cancer suppressor element Ishmael Upper CP1 mRNA, partial cds. // gb // 11 // ---","Annotation.Notes":"---","_row":"16352"}
{"Probe.Set.ID":"200866_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g337761","Target.Description":"gb:M32221.1 /DEF=Human saposin proteins A-D mRNA, complete cds. /FEA=mRNA /GEN=PSAP /DB_XREF=gi:337761 /UG=Hs.78575 prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) /FL=gb:NM_002778.1 gb:BC004275.1 gb:J03077.1 gb:D00422.1 gb:M60255.1 gb:M32221.1 gb:M60257.1 gb:M60258.1 gb:M81355.1","Representative.Public.ID":"M32221","Archival.UniGene.Cluster":"Hs.78575","UniGene.ID":"Hs.523004","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:73246614-73280989 (-) // 99.91 // q22.1","Gene.Title":"prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)","Gene.Symbol":"PSAP","Chromosomal.Location":"chr10q21-q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000197746","Entrez.Gene":"5660","SwissProt":"P07602 /// Q53FJ5 /// Q59EN5 /// Q5BJH1 /// Q5JQ36","EC":"---","OMIM":"176801","RefSeq.Protein.ID":"NP_002769.1","RefSeq.Transcript.ID":"NM_002778","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6629 // lipid metabolism // inferred from electronic annotation /// 6665 // sphingolipid metabolism // inferred from electronic annotation /// 6687 // glycosphingolipid metabolism // traceable author statement /// 6869 // lipid transport // traceable author statement /// 7040 // lysosome organization and biogenesis // inferred from electronic annotation /// 6687 // glycosphingolipid metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5615 // extracellular space // traceable author statement /// 5764 // lysosome // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement","Gene.Ontology.Molecular.Function":"8047 // enzyme activator activity // traceable author statement /// 8289 // lipid binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 9.5E-14 /// --- // --- // 2.5E-11 /// --- // --- // 4.9E-15 /// --- // --- // 4.9E-13 /// --- // --- // 3.3E-32 /// --- // --- // 2.6E-29 /// --- // --- // 8.1E-17 /// --- // --- // 4.2E-16 /// --- // --- // 5.7E-15 /// --- // --- // 5.1E-11 /// --- // --- // 4.9E-15 /// --- // --- // 4.9E-13 /// --- // --- // 2.6E-29 /// --- // --- // 4.2E-16 /// --- // --- // 5.7E-15 /// IPR008138 // Saposin-like type B, 2 // 9.5E-14 /// IPR008138 // Saposin-like type B, 2 // 2.5E-11 /// IPR008138 // Saposin-like type B, 2 // 4.9E-15 /// IPR008138 // Saposin-like type B, 2 // 4.9E-13 /// IPR007856 // Saposin-like type B, 1 // 8.1E-17 /// IPR007856 // Saposin-like type B, 1 // 4.2E-16 /// IPR007856 // Saposin-like type B, 1 // 5.7E-15 /// IPR003119 // Saposin type A // 3.3E-32 /// IPR003119 // Saposin type A // 2.6E-29","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002778(11)","Transcript.Assignments":"NM_002778 // Homo sapiens prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) (PSAP), mRNA. // refseq // 11 // --- /// ENST00000357471 // cdna:known-ccds chromosome:NCBI36:10:73246061:73281132:-1 gene:ENSG00000197746 CCDS7311.1 // ensembl_transcript // 11 // --- /// ENST00000360237 // cdna:known chromosome:NCBI36:10:73246064:73281015:-1 gene:ENSG00000197746 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000013721 // ensembl_prediction // 1 // Cross Hyb Matching Probes /// ENSESTT00000059632 // ensembl_est // 1 // Negative Strand Matching Probes /// ENSESTT00000059635 // ensembl_est // 1 // Negative Strand Matching Probes /// ENSESTT00000059637 // ensembl_est // 1 // Negative Strand Matching Probes /// BX647863 // gb // 1 // Negative Strand Matching Probes /// BX161430 // gb // 1 // Negative Strand Matching Probes /// BC029870 // gb // 1 // Negative Strand Matching Probes /// NM_152330 // refseq // 1 // Negative Strand Matching Probes /// GENSCAN00000064041 // ensembl_prediction // 1 // Negative Strand Matching Probes /// ENST00000356218 // ensembl_transcript // 1 // Negative Strand Matching Probes /// ENST00000344768 // ensembl_transcript // 1 // Negative Strand Matching Probes","_row":"394"}
{"Probe.Set.ID":"200871_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g11386146","Target.Description":"gb:NM_002778.1 /DEF=Homo sapiens prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) (PSAP), mRNA.  /FEA=mRNA /GEN=PSAP /PROD=prosaposin (variant Gaucher disease and variantmetachromatic leukodystrophy) /DB_XREF=gi:11386146 /UG=Hs.78575 prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) /FL=gb:NM_002778.1 gb:BC004275.1 gb:J03077.1 gb:D00422.1 gb:M60255.1 gb:M32221.1 gb:M60257.1 gb:M60258.1 gb:M81355.1","Representative.Public.ID":"NM_002778","Archival.UniGene.Cluster":"Hs.78575","UniGene.ID":"Hs.523004","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:73246063-73281092 (-) // 99.42 // q22.1","Gene.Title":"prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)","Gene.Symbol":"PSAP","Chromosomal.Location":"chr10q21-q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000197746","Entrez.Gene":"5660","SwissProt":"P07602 /// Q53FJ5 /// Q59EN5 /// Q5BJH1 /// Q5JQ36","EC":"---","OMIM":"176801","RefSeq.Protein.ID":"NP_002769.1","RefSeq.Transcript.ID":"NM_002778","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6629 // lipid metabolism // inferred from electronic annotation /// 6665 // sphingolipid metabolism // inferred from electronic annotation /// 6687 // glycosphingolipid metabolism // traceable author statement /// 6869 // lipid transport // traceable author statement /// 7040 // lysosome organization and biogenesis // inferred from electronic annotation /// 6687 // glycosphingolipid metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5615 // extracellular space // traceable author statement /// 5764 // lysosome // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement","Gene.Ontology.Molecular.Function":"8047 // enzyme activator activity // traceable author statement /// 8289 // lipid binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 9.5E-14 /// --- // --- // 2.5E-11 /// --- // --- // 4.9E-15 /// --- // --- // 4.9E-13 /// --- // --- // 3.3E-32 /// --- // --- // 2.6E-29 /// --- // --- // 8.1E-17 /// --- // --- // 4.2E-16 /// --- // --- // 5.7E-15 /// --- // --- // 5.1E-11 /// --- // --- // 4.9E-15 /// --- // --- // 4.9E-13 /// --- // --- // 2.6E-29 /// --- // --- // 4.2E-16 /// --- // --- // 5.7E-15 /// IPR008138 // Saposin-like type B, 2 // 9.5E-14 /// IPR008138 // Saposin-like type B, 2 // 2.5E-11 /// IPR008138 // Saposin-like type B, 2 // 4.9E-15 /// IPR008138 // Saposin-like type B, 2 // 4.9E-13 /// IPR007856 // Saposin-like type B, 1 // 8.1E-17 /// IPR007856 // Saposin-like type B, 1 // 4.2E-16 /// IPR007856 // Saposin-like type B, 1 // 5.7E-15 /// IPR003119 // Saposin type A // 3.3E-32 /// IPR003119 // Saposin type A // 2.6E-29","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002778(11)","Transcript.Assignments":"NM_002778 // Homo sapiens prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) (PSAP), mRNA. // refseq // 11 // --- /// ENST00000357471 // cdna:known-ccds chromosome:NCBI36:10:73246061:73281132:-1 gene:ENSG00000197746 CCDS7311.1 // ensembl_transcript // 11 // --- /// ENST00000360237 // cdna:known chromosome:NCBI36:10:73246064:73281015:-1 gene:ENSG00000197746 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENST00000373120 // ensembl_transcript // 4 // Cross Hyb Matching Probes","_row":"399"}
{"Probe.Set.ID":"206306_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4506758","Target.Description":"gb:NM_001036.1 /DEF=Homo sapiens ryanodine receptor 3 (RYR3), mRNA. /FEA=mRNA /GEN=RYR3 /PROD=ryanodine receptor 3 /DB_XREF=gi:4506758 /UG=Hs.9349 ryanodine receptor 3 /FL=gb:AB001025.1 gb:AJ001515.1 gb:NM_001036.1","Representative.Public.ID":"NM_001036","Archival.UniGene.Cluster":"Hs.9349","UniGene.ID":"Hs.369250","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:31390468-31945594 (+) // 99.72 // q13.3","Gene.Title":"ryanodine receptor 3","Gene.Symbol":"RYR3","Chromosomal.Location":"chr15q14-q15","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000198838","Entrez.Gene":"6263","SwissProt":"Q15413","EC":"---","OMIM":"180903","RefSeq.Protein.ID":"NP_001027.2","RefSeq.Transcript.ID":"NM_001036","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6812 // cation transport // inferred from electronic annotation /// 6816 // calcium ion transport // traceable author statement /// 6874 // calcium ion homeostasis // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation /// 6811 // ion transport // inferred from electronic annotation /// 6816 // calcium ion transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // not recorded /// 5887 // integral to plasma membrane // not recorded /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 5219 // ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 15278 // calcium-release channel activity // traceable author statement /// 5216 // ion channel activity // inferred from electronic annotation /// 5261 // cation channel activity // inferred from electronic annotation /// 5262 // calcium channel activity // inferred from electronic annotation /// 4872 // receptor activity // not recorded","Pathway":"Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR005821 // Ion transport protein // 1.1E-13 /// IPR003032 // Ryanodine receptor Ryr // 2.6E-53 /// IPR003032 // Ryanodine receptor Ryr // 2.6E-53 /// IPR003032 // Ryanodine receptor Ryr // 5.2E-49 /// IPR003032 // Ryanodine receptor Ryr // 2.2E-33 /// IPR009460 // Ryanodine Receptor TM 4-6 // 1.0E-126 /// IPR000699 // Intracellular calcium-release channel // 1.0E-94 /// IPR000699 // Intracellular calcium-release channel // 3.9E-77 /// IPR003608 // MIR domain // 7.7E-7 /// IPR003608 // MIR domain // 1.3E-6 /// IPR003608 // MIR domain // 1.1E-7 /// IPR003608 // MIR domain // 1.7E-20 /// IPR002048 // Calcium-binding EF-hand // 2.3E-5 /// IPR003877 // SPla/RYanodine receptor SPRY // 1.1E-36 /// IPR003877 // SPla/RYanodine receptor SPRY // 4.6E-39 /// IPR003877 // SPla/RYanodine receptor SPRY // 2.2E-37 /// IPR005821 // Ion transport protein // 1.1E-13 /// IPR009460 // Ryanodine Receptor TM 4-6 // 1.0E-126 /// IPR002048 // Calcium-binding EF-hand // 2.3E-5 /// IPR005821 // Ion transport protein // 1.1E-13 /// IPR009460 // Ryanodine Receptor TM 4-6 // 1.0E-126 /// IPR002048 // Calcium-binding EF-hand // 2.3E-5","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001036(11)","Transcript.Assignments":"ENSESTT00000045415 // --- // ensembl_est // 11 // --- /// NM_001036 // Homo sapiens ryanodine receptor 3 (RYR3), mRNA. // refseq // 11 // --- /// ENST00000362047 // cdna:known chromosome:NCBI36:15:31545225:31945594:1 gene:ENSG00000198838 // ensembl_transcript // 11 // --- /// ENST00000361728 // cdna:novel chromosome:NCBI36:15:31545225:31945594:1 gene:ENSG00000198838 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"5832"}
{"Probe.Set.ID":"201516_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4507208","Target.Description":"gb:NM_003132.1 /DEF=Homo sapiens spermidine synthase (SRM), mRNA. /FEA=mRNA /GEN=SRM /PROD=spermidine synthase /DB_XREF=gi:4507208 /UG=Hs.76244 spermidine synthase /FL=gb:BC000309.1 gb:NM_003132.1 gb:M34338.1","Representative.Public.ID":"NM_003132","Archival.UniGene.Cluster":"Hs.76244","UniGene.ID":"Hs.76244","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:11037263-11042668 (-) // 91.2 // p36.22","Gene.Title":"spermidine synthase","Gene.Symbol":"SRM","Chromosomal.Location":"chr1p36-p22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000116649","Entrez.Gene":"6723","SwissProt":"P19623","EC":"EC:2.5.1.16","OMIM":"182891","RefSeq.Protein.ID":"NP_003123.2","RefSeq.Transcript.ID":"NM_003132","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"8295 // spermidine biosynthesis // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"4766 // spermidine synthase activity // traceable author statement /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4766 // spermidine synthase activity // inferred from electronic annotation","Pathway":"Nucleotide_Metabolism // GenMAPP /// Urea cycle and metabolism of amino groups // KEGG /// Arginine and proline metabolism // KEGG /// beta-Alanine metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001045 // Spermine synthase // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"CR596521(10),NM_003132(10)","Transcript.Assignments":"CR596521 // full-length cDNA clone CS0DC002YF10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human). // gb // 10 // --- /// NM_003132 // Homo sapiens spermidine synthase (SRM), mRNA. // refseq // 10 // --- /// ENST00000235287 // cdna:known-ccds chromosome:NCBI36:1:11037233:11042668:-1 gene:ENSG00000116649 CCDS125.1 // ensembl_transcript // 10 // --- /// ENST00000376957 // cdna:known chromosome:NCBI36:1:11037236:11042678:-1 gene:ENSG00000116649 // ensembl_transcript // 10 // ---","Annotation.Notes":"ENSESTT00000094445 // ensembl_est // 5 // Cross Hyb Matching Probes /// GENSCAN00000042124 // ensembl_prediction // 7 // Cross Hyb Matching Probes","_row":"1044"}
{"Probe.Set.ID":"214553_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.7351.1","Target.Description":"Consensus includes gb:NM_006628.1 /DEF=Homo sapiens cyclic AMP phosphoprotein, 19 kD (ARPP-19), mRNA. /FEA=CDS /GEN=ARPP-19 /PROD=cyclic AMP phosphoprotein, 19 kD /DB_XREF=gi:5729731 /UG=Hs.7351 cyclic AMP phosphoprotein, 19 kD /FL=gb:NM_006628.1","Representative.Public.ID":"NM_006628","Archival.UniGene.Cluster":"Hs.7351","UniGene.ID":"Hs.512908","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:50631184-50636713 (-) // 90.92 // q21.2","Gene.Title":"cyclic AMP phosphoprotein, 19 kD","Gene.Symbol":"ARPP-19","Chromosomal.Location":"chr15q21.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000128989","Entrez.Gene":"10776","SwissProt":"P56211","EC":"---","OMIM":"605487","RefSeq.Protein.ID":"NP_006619.1","RefSeq.Transcript.ID":"NM_006628","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"45722 // positive regulation of gluconeogenesis // inferred from direct assay /// 46326 // positive regulation of glucose import // non-traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5102 // receptor binding // inferred from direct assay /// 15459 // potassium channel regulator activity // inferred from direct assay","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006760 // cAMP-regulated phosphoprotein/endosulfine conserved region // 7.4E-57 /// IPR006760 // cAMP-regulated phosphoprotein/endosulfine conserved region // 7.4E-57","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK123616(11),BC003418(11),CR593448(11),NM_006628(11)","Transcript.Assignments":"ENSESTT00000049923 // --- // ensembl_est // 11 // --- /// CR593448 // full-length cDNA clone CS0DF006YN02 of Fetal brain of Homo sapiens (human). // gb // 11 // --- /// AK123616 // Homo sapiens cDNA FLJ41622 fis, clone CTONG3008959, highly  similar to CAMP-REGULATED PHOSPHOPROTEIN 19. // gb // 11 // --- /// BC003418 // Homo sapiens cyclic AMP phosphoprotein, 19 kD, mRNA (cDNA clone MGC:5468 IMAGE:3451558), complete cds. // gb // 11 // --- /// NM_006628 // Homo sapiens cyclic AMP phosphoprotein, 19 kD (ARPP-19), mRNA. // refseq // 11 // --- /// ENST00000249822 // cdna:known chromosome:NCBI36:15:50626535:50648656:-1 gene:ENSG00000128989 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000049922 // ensembl_est // 5 // Cross Hyb Matching Probes /// GENSCAN00000001337 // ensembl_prediction // 1 // Cross Hyb Matching Probes /// GENSCAN00000025844 // ensembl_prediction // 7 // Cross Hyb Matching Probes /// ENST00000361429 // ensembl_transcript // 1 // Cross Hyb Matching Probes","_row":"13932"}
{"Probe.Set.ID":"221482_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13097335","Target.Description":"gb:BC003418.1 /DEF=Homo sapiens, cyclic AMP phosphoprotein, 19 kD, clone MGC:5468, mRNA, complete cds.  /FEA=mRNA /PROD=cyclic AMP phosphoprotein, 19 kD /DB_XREF=gi:13097335 /UG=Hs.7351 cyclic AMP phosphoprotein, 19 kD /FL=gb:BC003418.1 gb:AF084555.1","Representative.Public.ID":"BC003418","Archival.UniGene.Cluster":"Hs.7351","UniGene.ID":"Hs.512908","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:50630675-50648505 (-) // 98.53 // q21.2","Gene.Title":"cyclic AMP phosphoprotein, 19 kD","Gene.Symbol":"ARPP-19","Chromosomal.Location":"chr15q21.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000128989","Entrez.Gene":"10776","SwissProt":"P56211","EC":"---","OMIM":"605487","RefSeq.Protein.ID":"NP_006619.1","RefSeq.Transcript.ID":"NM_006628","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"45722 // positive regulation of gluconeogenesis // inferred from direct assay /// 46326 // positive regulation of glucose import // non-traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5102 // receptor binding // inferred from direct assay /// 15459 // potassium channel regulator activity // inferred from direct assay","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006760 // cAMP-regulated phosphoprotein/endosulfine conserved region // 7.4E-57 /// IPR006760 // cAMP-regulated phosphoprotein/endosulfine conserved region // 7.4E-57","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK123616(11),BC003418(11),CR593448(11),NM_006628(11)","Transcript.Assignments":"CR593448 // full-length cDNA clone CS0DF006YN02 of Fetal brain of Homo sapiens (human). // gb // 11 // --- /// AK123616 // Homo sapiens cDNA FLJ41622 fis, clone CTONG3008959, highly  similar to CAMP-REGULATED PHOSPHOPROTEIN 19. // gb // 11 // --- /// BC003418 // Homo sapiens cyclic AMP phosphoprotein, 19 kD, mRNA (cDNA clone MGC:5468 IMAGE:3451558), complete cds. // gb // 11 // --- /// NM_006628 // Homo sapiens cyclic AMP phosphoprotein, 19 kD (ARPP-19), mRNA. // refseq // 11 // --- /// ENST00000249822 // cdna:known chromosome:NCBI36:15:50626535:50648656:-1 gene:ENSG00000128989 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"20845"}
{"Probe.Set.ID":"221483_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5813858","Target.Description":"gb:AF084555.1 /DEF=Homo sapiens okadaic acid-inducible and cAMP-regulated phosphoprotein 19 (ARPP-19) mRNA, complete cds.  /FEA=mRNA /GEN=ARPP-19 /PROD=okadaic acid-inducible and cAMP-regulatedphosphoprotein 19 /DB_XREF=gi:5813858 /UG=Hs.7351 cyclic AMP phosphoprotein, 19 kD /FL=gb:BC003418.1 gb:AF084555.1","Representative.Public.ID":"AF084555","Archival.UniGene.Cluster":"Hs.7351","UniGene.ID":"Hs.512908","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:180341842-180346974 (+) // 76.97 // q35.3 /// chr15:50626734-50648497 (-) // 83.81 // q21.2","Gene.Title":"cyclic AMP phosphoprotein, 19 kD","Gene.Symbol":"ARPP-19","Chromosomal.Location":"chr15q21.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000128989","Entrez.Gene":"10776","SwissProt":"P56211","EC":"---","OMIM":"605487","RefSeq.Protein.ID":"NP_006619.1","RefSeq.Transcript.ID":"NM_006628","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"45722 // positive regulation of gluconeogenesis // inferred from direct assay /// 46326 // positive regulation of glucose import // non-traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5102 // receptor binding // inferred from direct assay /// 15459 // potassium channel regulator activity // inferred from direct assay","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006760 // cAMP-regulated phosphoprotein/endosulfine conserved region // 7.4E-57 /// IPR006760 // cAMP-regulated phosphoprotein/endosulfine conserved region // 7.4E-57","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_006628(11)","Transcript.Assignments":"NM_006628 // Homo sapiens cyclic AMP phosphoprotein, 19 kD (ARPP-19), mRNA. // refseq // 11 // --- /// ENST00000249822 // cdna:known chromosome:NCBI36:15:50626535:50648656:-1 gene:ENSG00000128989 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"20846"}
{"Probe.Set.ID":"208328_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5031906","Target.Description":"gb:NM_005587.1 /DEF=Homo sapiens MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) (MEF2A), mRNA.  /FEA=mRNA /GEN=MEF2A /PROD=MADS box transcription enhancer factor 2,polypeptide A (myocyte enhancer factor 2A) /DB_XREF=gi:5031906 /UG=Hs.182280 MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) /FL=gb:NM_005587.1","Representative.Public.ID":"NM_005587","Archival.UniGene.Cluster":"Hs.182280","UniGene.ID":"Hs.268675","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:97956184-98071524 (+) // 87.66 // q26.3","Gene.Title":"MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)","Gene.Symbol":"MEF2A","Chromosomal.Location":"chr15q26","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000068305","Entrez.Gene":"4205","SwissProt":"Q02078 /// Q59GX4 /// Q7Z6C9","EC":"---","OMIM":"600660 /// 608320","RefSeq.Protein.ID":"NP_005578.1","RefSeq.Transcript.ID":"NM_005587","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6366 // transcription from RNA polymerase II promoter // not recorded /// 7517 // muscle development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // inferred from electronic annotation /// 3700 // transcription factor activity // non-traceable author statement /// 3713 // transcription coactivator activity // not recorded /// 43565 // sequence-specific DNA binding // inferred from electronic annotation /// 3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002100 // Transcription factor, MADS-box // 7.1E-25 /// IPR002100 // Transcription factor, MADS-box // 7.1E-25","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AB208985(11),AL831995(11),NM_005587(11)","Transcript.Assignments":"AB208985 // Homo sapiens mRNA for MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) variant protein. // gb // 11 // --- /// AL831995 // Homo sapiens mRNA; cDNA DKFZp451J163 (from clone DKFZp451J163). // gb // 11 // --- /// NM_005587 // Homo sapiens MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) (MEF2A), mRNA. // refseq // 11 // --- /// ENST00000338042 // cdna:known chromosome:NCBI36:15:97923712:98074131:1 gene:ENSG00000068305 // ensembl_transcript // 11 // ---","Annotation.Notes":"BC013437 // gb // 8 // Cross Hyb Matching Probes /// ENST00000346108 // ensembl_transcript // 8 // Cross Hyb Matching Probes /// ENST00000354410 // ensembl_transcript // 8 // Cross Hyb Matching Probes","_row":"7831"}
{"Probe.Set.ID":"212535_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.288993.0","Target.Description":"Consensus includes gb:AA142929 /FEA=EST /DB_XREF=gi:1712307 /DB_XREF=est:zl40g07.s1 /CLONE=IMAGE:504444 /UG=Hs.288993 ESTs","Representative.Public.ID":"AA142929","Archival.UniGene.Cluster":"Hs.288993","UniGene.ID":"Hs.268675","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:98072410-98074211 (+) // 98.68 // q26.3","Gene.Title":"MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)","Gene.Symbol":"MEF2A","Chromosomal.Location":"chr15q26","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000068305","Entrez.Gene":"4205","SwissProt":"Q02078 /// Q59GX4 /// Q7Z6C9","EC":"---","OMIM":"600660 /// 608320","RefSeq.Protein.ID":"NP_005578.1","RefSeq.Transcript.ID":"NM_005587","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6366 // transcription from RNA polymerase II promoter // not recorded /// 7517 // muscle development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // inferred from electronic annotation /// 3700 // transcription factor activity // non-traceable author statement /// 3713 // transcription coactivator activity // not recorded /// 43565 // sequence-specific DNA binding // inferred from electronic annotation /// 3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002100 // Transcription factor, MADS-box // 7.1E-25","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL831995(10)","Transcript.Assignments":"AL831995 // Homo sapiens mRNA; cDNA DKFZp451J163 (from clone DKFZp451J163). // gb // 10 // --- /// ENST00000338042 // cdna:known chromosome:NCBI36:15:97923712:98074131:1 gene:ENSG00000068305 // ensembl_transcript // 11 // ---","Annotation.Notes":"BX640928 // gb // 7 // Negative Strand Matching Probes /// ENST00000378904 // ensembl_transcript // 11 // Negative Strand Matching Probes","_row":"11920"}
{"Probe.Set.ID":"214684_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.182280.2","Target.Description":"Consensus includes gb:X63381.1 /DEF=Homo sapiens mRNA for serum response factor-related protein, RSRFC4.  /FEA=mRNA /GEN=RSRFC4 /PROD=serum response factor-related protein /DB_XREF=gi:432655 /UG=Hs.182280 MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)","Representative.Public.ID":"X63381","Archival.UniGene.Cluster":"Hs.182280","UniGene.ID":"Hs.268675","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:97923745-98072157 (+) // 96.17 // q26.3","Gene.Title":"MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)","Gene.Symbol":"MEF2A","Chromosomal.Location":"chr15q26","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000068305","Entrez.Gene":"4205","SwissProt":"Q02078 /// Q59GX4 /// Q7Z6C9","EC":"---","OMIM":"600660 /// 608320","RefSeq.Protein.ID":"NP_005578.1","RefSeq.Transcript.ID":"NM_005587","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6366 // transcription from RNA polymerase II promoter // not recorded /// 7517 // muscle development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // inferred from electronic annotation /// 3700 // transcription factor activity // non-traceable author statement /// 3713 // transcription coactivator activity // not recorded /// 43565 // sequence-specific DNA binding // inferred from electronic annotation /// 3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002100 // Transcription factor, MADS-box // 7.1E-25","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL831995(11)","Transcript.Assignments":"AL831995 // Homo sapiens mRNA; cDNA DKFZp451J163 (from clone DKFZp451J163). // gb // 11 // --- /// ENST00000338042 // cdna:known chromosome:NCBI36:15:97923712:98074131:1 gene:ENSG00000068305 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"14060"}
{"Probe.Set.ID":"203952_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6671584","Target.Description":"gb:NM_007348.1 /DEF=Homo sapiens activating transcription factor 6 (ATF6), mRNA. /FEA=mRNA /GEN=ATF6 /PROD=activating transcription factor 6 /DB_XREF=gi:6671584 /UG=Hs.247433 activating transcription factor 6 /FL=gb:AF005887.1 gb:AB015856.1 gb:NM_007348.1","Representative.Public.ID":"NM_007348","Archival.UniGene.Cluster":"Hs.247433","UniGene.ID":"Hs.492740","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:160002733-160195475 (+) // 98.46 // q23.3","Gene.Title":"activating transcription factor 6","Gene.Symbol":"ATF6","Chromosomal.Location":"chr1q22-q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000118217","Entrez.Gene":"22926","SwissProt":"P18850 /// Q59H30","EC":"---","OMIM":"605537","RefSeq.Protein.ID":"NP_031374.2","RefSeq.Transcript.ID":"NM_007348","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 6457 // protein folding // traceable author statement /// 6986 // response to unfolded protein // inferred from electronic annotation /// 6990 // unfolded protein response, positive regulation of target gene transcription // traceable author statement /// 7165 // signal transduction // traceable author statement /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6950 // response to stress // traceable author statement","Gene.Ontology.Cellular.Component":"5635 // nuclear envelope // traceable author statement /// 5654 // nucleoplasm // traceable author statement /// 5789 // endoplasmic reticulum membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 5634 // nucleus // inferred from electronic annotation /// 5783 // endoplasmic reticulum // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement /// 3702 // RNA polymerase II transcription factor activity // traceable author statement /// 3713 // transcription coactivator activity // traceable author statement /// 43565 // sequence-specific DNA binding // inferred from electronic annotation /// 46983 // protein dimerization activity // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR004827 // Basic-leucine zipper (bZIP) transcription factor // 5.6E-12","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Genome Target Overlap based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Genome Target Overlap // B","Annotation.Transcript.Cluster":"NM_007348","Transcript.Assignments":"BX538263 // Homo sapiens mRNA; cDNA DKFZp686P2194 (from clone DKFZp686P2194). // gb // 0 // chr1:160194974-160199584(+) /// ENST00000263291 // cdna:known chromosome:NCBI36:1:160002714:160195496:1 gene:ENSG00000118217 // ensembl_transcript // 0 // chr1:160002713-160195496(+) /// ENSESTT00000078192 // --- // ensembl_est // 0 // chr1:160028681-160195192(+) /// NM_007348 // Homo sapiens activating transcription factor 6 (ATF6), mRNA. // refseq // 0 // chr1:160002707-160195476(+) /// ENST00000367942 // cdna:known-ccds chromosome:NCBI36:1:160002708:160200484:1 gene:ENSG00000118217 CCDS1235.1 // ensembl_transcript // 0 // chr1:160002707-160200484(+)","Annotation.Notes":"GENSCAN00000043138 // ensembl_prediction // 4 // Cross Hyb Matching Probes","_row":"3479"}
{"Probe.Set.ID":"217550_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.252497.0","Target.Description":"Consensus includes gb:AA576497 /FEA=EST /DB_XREF=gi:2353997 /DB_XREF=est:nm76b07.s1 /CLONE=IMAGE:1074133 /UG=Hs.252497 ESTs","Representative.Public.ID":"AA576497","Archival.UniGene.Cluster":"Hs.252497","UniGene.ID":"Hs.492740","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:160195920-160196537 (+) // 67.72 // q23.3","Gene.Title":"Activating transcription factor 6","Gene.Symbol":"ATF6","Chromosomal.Location":"chr1q22-q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000118217","Entrez.Gene":"22926","SwissProt":"P18850 /// Q59H30","EC":"---","OMIM":"605537","RefSeq.Protein.ID":"NP_031374.2","RefSeq.Transcript.ID":"NM_007348","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6350 // transcription // inferred from electronic annotation /// 6357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 6457 // protein folding // traceable author statement /// 6986 // response to unfolded protein // inferred from electronic annotation /// 6990 // unfolded protein response, positive regulation of target gene transcription // traceable author statement /// 7165 // signal transduction // traceable author statement /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6950 // response to stress // traceable author statement","Gene.Ontology.Cellular.Component":"5635 // nuclear envelope // traceable author statement /// 5654 // nucleoplasm // traceable author statement /// 5789 // endoplasmic reticulum membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 5634 // nucleus // inferred from electronic annotation /// 5783 // endoplasmic reticulum // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement /// 3702 // RNA polymerase II transcription factor activity // traceable author statement /// 3713 // transcription coactivator activity // traceable author statement /// 43565 // sequence-specific DNA binding // inferred from electronic annotation /// 46983 // protein dimerization activity // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 3677 // DNA binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BX538263(11)","Transcript.Assignments":"BX538263 // Homo sapiens mRNA; cDNA DKFZp686P2194 (from clone DKFZp686P2194). // gb // 11 // --- /// ENST00000367942 // cdna:known-ccds chromosome:NCBI36:1:160002708:160200484:1 gene:ENSG00000118217 CCDS1235.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"16915"}
{"Probe.Set.ID":"212871_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.30327.0","Target.Description":"Consensus includes gb:NM_003668.1 /DEF=Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), mRNA.  /FEA=CDS /GEN=MAPKAPK5 /PROD=mitogen-activated protein kinase-activatedprotein kinase 5 /DB_XREF=gi:4506034 /UG=Hs.30327 mitogen-activated protein kinase-activated protein kinase 5 /FL=gb:NM_003668.1","Representative.Public.ID":"NM_003668","Archival.UniGene.Cluster":"Hs.30327","UniGene.ID":"Hs.413901","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr12:110764276-110815604 (+) // 89.46 // q24.12","Gene.Title":"mitogen-activated protein kinase-activated protein kinase 5","Gene.Symbol":"MAPKAPK5","Chromosomal.Location":"chr12q24.12-q24.13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000089022","Entrez.Gene":"8550","SwissProt":"Q8IW41","EC":"---","OMIM":"606723","RefSeq.Protein.ID":"NP_003659.2 /// NP_620777.1","RefSeq.Transcript.ID":"NM_003668 /// NM_139078","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 6950 // response to stress // not recorded /// 7165 // signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // traceable author statement /// 4708 // MAP kinase kinase activity // traceable author statement /// 5524 // ATP binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"hanks // 2.3.1 // CaMK Group; CaMK Other; MAPKAP2 // 3.0E-73 /// hanks // 2.3.1 // CaMK Group; CaMK Other; MAPKAP2 // 4.0E-74","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 2.4E-74 /// IPR000719 // Protein kinase // 2.8E-78","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003668(11),NM_139078(11)","Transcript.Assignments":"ENSESTT00000071925 // --- // ensembl_est // 11 // --- /// ENSESTT00000071926 // --- // ensembl_est // 11 // --- /// NM_139078 // Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_003668 // Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000202788 // cdna:known chromosome:NCBI36:12:110787435:110815543:1 gene:ENSG00000089022 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"12256"}
{"Probe.Set.ID":"217749_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g11559928","Target.Description":"gb:NM_016128.1 /DEF=Homo sapiens coat protein gamma-cop (LOC51137), mRNA. /FEA=mRNA /GEN=LOC51137 /PROD=coat protein gamma-cop /DB_XREF=gi:11559928 /UG=Hs.102950 coat protein gamma-cop /FL=gb:AB047846.1 gb:NM_016128.1 gb:AF100756.1","Representative.Public.ID":"NM_016128","Archival.UniGene.Cluster":"Hs.102950","UniGene.ID":"Hs.518250","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:130451227-130479304 (+) // 99.13 // q21.3","Gene.Title":"coatomer protein complex, subunit gamma","Gene.Symbol":"COPG","Chromosomal.Location":"chr3q21.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000181789","Entrez.Gene":"22820","SwissProt":"Q54AC4 /// Q8WUI6 /// Q9Y678","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057212.1","RefSeq.Transcript.ID":"NM_016128","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 6891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 15031 // protein transport // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5795 // Golgi stack // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 30126 // COPI vesicle coat // inferred from sequence or structural similarity","Gene.Ontology.Molecular.Function":"5488 // binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002553 // Adaptin, N-terminal // 1.0E-126 /// IPR002553 // Adaptin, N-terminal // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_016128(11)","Transcript.Assignments":"NM_016128 // Homo sapiens coatomer protein complex, subunit gamma (COPG), mRNA. // refseq // 11 // --- /// ENST00000314797 // cdna:known chromosome:NCBI36:3:130451143:130479304:1 gene:ENSG00000181789 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000086635 // ensembl_est // 6 // Cross Hyb Matching Probes /// GENSCAN00000003369 // ensembl_prediction // 5 // Cross Hyb Matching Probes","_row":"17114"}
{"Probe.Set.ID":"204249_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6633806","Target.Description":"gb:NM_005574.2 /DEF=Homo sapiens LIM domain only 2 (rhombotin-like 1) (LMO2), mRNA. /FEA=mRNA /GEN=LMO2 /PROD=LIM domain only 2 /DB_XREF=gi:6633806 /UG=Hs.184585 LIM domain only 2 (rhombotin-like 1) /FL=gb:NM_005574.2","Representative.Public.ID":"NM_005574","Archival.UniGene.Cluster":"Hs.184585","UniGene.ID":"Hs.34560","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:33836700-33870412 (-) // 97.7 // p13","Gene.Title":"LIM domain only 2 (rhombotin-like 1)","Gene.Symbol":"LMO2","Chromosomal.Location":"chr11p13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000135363","Entrez.Gene":"4005","SwissProt":"P25791 /// Q9P1J4","EC":"---","OMIM":"180385","RefSeq.Protein.ID":"NP_005565.1","RefSeq.Transcript.ID":"NM_005574","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7275 // development // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5515 // protein binding // inferred from sequence or structural similarity /// 8270 // zinc ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 3.2E-14 /// --- // --- // 3.8E-22 /// IPR001781 // Zn-binding protein, LIM // 3.2E-14 /// IPR001781 // Zn-binding protein, LIM // 3.8E-22 /// IPR001781 // Zn-binding protein, LIM // 3.2E-14 /// IPR001781 // Zn-binding protein, LIM // 3.8E-22","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF257211(11),BC042426(11),BC073973(11),NM_005574(11)","Transcript.Assignments":"AF257211 // Homo sapiens LMO2b splice variant (LMO2) mRNA, complete cds. // gb // 11 // --- /// AK127915 // Homo sapiens cDNA FLJ46022 fis, clone SPLEN2021983, highly  similar to Rhombotin-2. // gb // 11 // --- /// BC042426 // Homo sapiens LIM domain only 2 (rhombotin-like 1), mRNA (cDNA clone MGC:34396 IMAGE:5188482), complete cds. // gb // 11 // --- /// BC073973 // Homo sapiens cDNA clone MGC:87978 IMAGE:5734404, complete cds. // gb // 11 // --- /// NM_005574 // Homo sapiens LIM domain only 2 (rhombotin-like 1) (LMO2), mRNA. // refseq // 11 // --- /// ENST00000257818 // cdna:known-ccds chromosome:NCBI36:11:33836701:33870412:-1 gene:ENSG00000135363 CCDS7888.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"3776.1"}
{"Probe.Set.ID":"203963_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g9951924","Target.Description":"gb:NM_001218.2 /DEF=Homo sapiens carbonic anhydrase XII (CA12), mRNA. /FEA=mRNA /GEN=CA12 /PROD=carbonic anhydrase XII precursor /DB_XREF=gi:9951924 /UG=Hs.5338 carbonic anhydrase XII /FL=gb:AF037335.1 gb:AF051882.1 gb:NM_001218.2","Representative.Public.ID":"NM_001218","Archival.UniGene.Cluster":"Hs.5338","UniGene.ID":"Hs.210995","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:61403958-61461087 (-) // 96.11 // q22.2","Gene.Title":"carbonic anhydrase XII","Gene.Symbol":"CA12","Chromosomal.Location":"chr15q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000074410","Entrez.Gene":"771","SwissProt":"O43570 /// Q9NXM9","EC":"EC:4.2.1.1","OMIM":"603263","RefSeq.Protein.ID":"NP_001209.1 /// NP_996808.1","RefSeq.Transcript.ID":"NM_001218 /// NM_206925","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6730 // one-carbon compound metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4089 // carbonate dehydratase activity // traceable author statement /// 8270 // zinc ion binding // traceable author statement /// 16829 // lyase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4089 // carbonate dehydratase activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation","Pathway":"Nitrogen metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001148 // Carbonic anhydrase, eukaryotic // 1.6E-86","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001218(11),NM_206925(11)","Transcript.Assignments":"NM_001218 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_206925 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000178638 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10185.1 // ensembl_transcript // 11 // --- /// ENST00000344366 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10186.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"3490"}
{"Probe.Set.ID":"204508_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12654376","Target.Description":"gb:BC001012.1 /DEF=Homo sapiens, hypothetical protein FLJ20151, clone MGC:1073, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein FLJ20151 /DB_XREF=gi:12654376 /UG=Hs.279916 hypothetical protein FLJ20151 /FL=gb:BC001012.1 gb:NM_017689.1","Representative.Public.ID":"BC001012","Archival.UniGene.Cluster":"Hs.279916","UniGene.ID":"Hs.210995","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:61403059-61403849 (-) // 91.92 // q22.2","Gene.Title":"carbonic anhydrase XII","Gene.Symbol":"CA12","Chromosomal.Location":"chr15q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000074410","Entrez.Gene":"771","SwissProt":"O43570 /// O43747 /// Q9NXM9","EC":"EC:4.2.1.1","OMIM":"603263","RefSeq.Protein.ID":"NP_001209.1 /// NP_996808.1","RefSeq.Transcript.ID":"NM_001218 /// NM_206925","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6730 // one-carbon compound metabolism // inferred from electronic annotation /// 6461 // protein complex assembly // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation /// 6886 // intracellular protein transport // inferred from electronic annotation /// 6897 // endocytosis // inferred from electronic annotation /// 15031 // protein transport // inferred from electronic annotation /// 6886 // intracellular protein transport // traceable author statement","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement /// 5794 // Golgi apparatus // inferred from direct assay /// 30136 // clathrin-coated vesicle // inferred from direct assay /// 16021 // integral to membrane // inferred from electronic annotation /// 5795 // Golgi stack // inferred from electronic annotation /// 5905 // coated pit // inferred from electronic annotation /// 30130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 5737 // cytoplasm // traceable author statement /// 5794 // Golgi apparatus // traceable author statement /// 30119 // membrane coat adaptor complex // traceable author statement","Gene.Ontology.Molecular.Function":"4089 // carbonate dehydratase activity // traceable author statement /// 8270 // zinc ion binding // traceable author statement /// 16829 // lyase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4089 // carbonate dehydratase activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 5488 // binding // inferred from electronic annotation /// 5215 // transporter activity // traceable author statement","Pathway":"Nitrogen metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001148 // Carbonic anhydrase, eukaryotic // 1.6E-86","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK000158(11),NM_001218(11),NM_206925(11)","Transcript.Assignments":"AL050025 // Homo sapiens mRNA; cDNA DKFZp564D066 (from clone DKFZp564D066). // gb // 11 // --- /// AK000158 // Homo sapiens cDNA FLJ20151 fis, clone COL08412. // gb // 11 // --- /// NM_001218 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_206925 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000178638 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10185.1 // ensembl_transcript // 11 // --- /// ENST00000344366 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10186.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4035"}
{"Probe.Set.ID":"204509_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g8923149","Target.Description":"gb:NM_017689.1 /DEF=Homo sapiens hypothetical protein FLJ20151 (FLJ20151), mRNA. /FEA=mRNA /GEN=FLJ20151 /PROD=hypothetical protein FLJ20151 /DB_XREF=gi:8923149 /UG=Hs.279916 hypothetical protein FLJ20151 /FL=gb:BC001012.1 gb:NM_017689.1","Representative.Public.ID":"NM_017689","Archival.UniGene.Cluster":"Hs.279916","UniGene.ID":"Hs.210995","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:61401673-61403706 (-) // 90.39 // q22.2","Gene.Title":"carbonic anhydrase XII","Gene.Symbol":"CA12","Chromosomal.Location":"chr15q22","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"771","SwissProt":"O43570 /// Q9NXM9","EC":"EC:4.2.1.1","OMIM":"603263","RefSeq.Protein.ID":"NP_001209.1 /// NP_996808.1","RefSeq.Transcript.ID":"NM_001218 /// NM_206925","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6730 // one-carbon compound metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4089 // carbonate dehydratase activity // traceable author statement /// 8270 // zinc ion binding // traceable author statement /// 16829 // lyase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4089 // carbonate dehydratase activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation","Pathway":"Nitrogen metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK000158(11)","Transcript.Assignments":"AK000158 // Homo sapiens cDNA FLJ20151 fis, clone COL08412. // gb // 11 // ---","Annotation.Notes":"---","_row":"4036"}
{"Probe.Set.ID":"210735_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12653028","Target.Description":"gb:BC000278.1 /DEF=Homo sapiens, Similar to carbonic anhydrase XII, clone MGC:1792, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to carbonic anhydrase XII /DB_XREF=gi:12653028 /UG=Hs.5338 carbonic anhydrase XII /FL=gb:BC000278.1","Representative.Public.ID":"BC000278","Archival.UniGene.Cluster":"Hs.5338","UniGene.ID":"Hs.210995","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:61404980-61461084 (-) // 98.89 // q22.2","Gene.Title":"carbonic anhydrase XII","Gene.Symbol":"CA12","Chromosomal.Location":"chr15q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000074410","Entrez.Gene":"771","SwissProt":"O43570 /// Q9NXM9","EC":"EC:4.2.1.1","OMIM":"603263","RefSeq.Protein.ID":"NP_001209.1 /// NP_996808.1","RefSeq.Transcript.ID":"NM_001218 /// NM_206925","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6730 // one-carbon compound metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4089 // carbonate dehydratase activity // traceable author statement /// 8270 // zinc ion binding // traceable author statement /// 16829 // lyase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4089 // carbonate dehydratase activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation","Pathway":"Nitrogen metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001148 // Carbonic anhydrase, eukaryotic // 1.6E-86","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001218(10),NM_206925(10)","Transcript.Assignments":"ENSESTT00000095601 // --- // ensembl_est // 10 // --- /// NM_001218 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 1, mRNA. // refseq // 10 // --- /// NM_206925 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 2, mRNA. // refseq // 10 // --- /// ENST00000178638 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10185.1 // ensembl_transcript // 10 // --- /// ENST00000344366 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10186.1 // ensembl_transcript // 10 // ---","Annotation.Notes":"---","_row":"10196"}
{"Probe.Set.ID":"214164_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.5344.1","Target.Description":"Consensus includes gb:BF752277 /FEA=EST /DB_XREF=gi:12078953 /DB_XREF=est:RC3-BN0428-201100-011-c11 /UG=Hs.5344 adaptor-related protein complex 1, gamma 1 subunit","Representative.Public.ID":"BF752277","Archival.UniGene.Cluster":"Hs.5344","UniGene.ID":"Hs.210995","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:61402782-61403202 (-) // 94.17 // q22.2","Gene.Title":"carbonic anhydrase XII","Gene.Symbol":"CA12","Chromosomal.Location":"chr15q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000074410","Entrez.Gene":"771","SwissProt":"O43570 /// O43747 /// Q9NXM9","EC":"EC:4.2.1.1","OMIM":"603263","RefSeq.Protein.ID":"NP_001209.1 /// NP_996808.1","RefSeq.Transcript.ID":"NM_001218 /// NM_206925","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6730 // one-carbon compound metabolism // inferred from electronic annotation /// 6461 // protein complex assembly // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation /// 6886 // intracellular protein transport // inferred from electronic annotation /// 6897 // endocytosis // inferred from electronic annotation /// 15031 // protein transport // inferred from electronic annotation /// 6886 // intracellular protein transport // traceable author statement","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement /// 5794 // Golgi apparatus // inferred from direct assay /// 30136 // clathrin-coated vesicle // inferred from direct assay /// 16021 // integral to membrane // inferred from electronic annotation /// 5795 // Golgi stack // inferred from electronic annotation /// 5905 // coated pit // inferred from electronic annotation /// 30130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 5737 // cytoplasm // traceable author statement /// 5794 // Golgi apparatus // traceable author statement /// 30119 // membrane coat adaptor complex // traceable author statement","Gene.Ontology.Molecular.Function":"4089 // carbonate dehydratase activity // traceable author statement /// 8270 // zinc ion binding // traceable author statement /// 16829 // lyase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4089 // carbonate dehydratase activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 5488 // binding // inferred from electronic annotation /// 5215 // transporter activity // traceable author statement","Pathway":"Nitrogen metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001148 // Carbonic anhydrase, eukaryotic // 1.6E-86","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK000158(11),NM_001218(11),NM_206925(11)","Transcript.Assignments":"AL050025 // Homo sapiens mRNA; cDNA DKFZp564D066 (from clone DKFZp564D066). // gb // 10 // --- /// AK000158 // Homo sapiens cDNA FLJ20151 fis, clone COL08412. // gb // 11 // --- /// NM_001218 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_206925 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000178638 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10185.1 // ensembl_transcript // 11 // --- /// ENST00000344366 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10186.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"13543"}
{"Probe.Set.ID":"215867_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.5344.2","Target.Description":"Consensus includes gb:AL050025.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564D066 (from clone DKFZp564D066); partial cds.  /FEA=mRNA /GEN=DKFZp564D066 /PROD=hypothetical protein /DB_XREF=gi:4884095 /UG=Hs.5344 adaptor-related protein complex 1, gamma 1 subunit","Representative.Public.ID":"AL050025","Archival.UniGene.Cluster":"Hs.5344","UniGene.ID":"Hs.210995","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr16:70333685-70364906 (-) // 57.14 // q22.3","Gene.Title":"carbonic anhydrase XII","Gene.Symbol":"CA12","Chromosomal.Location":"chr15q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000074410","Entrez.Gene":"771","SwissProt":"O43570 /// O43747 /// Q9NXM9","EC":"EC:4.2.1.1","OMIM":"603263","RefSeq.Protein.ID":"NP_001209.1 /// NP_996808.1","RefSeq.Transcript.ID":"NM_001218 /// NM_206925","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6730 // one-carbon compound metabolism // inferred from electronic annotation /// 6461 // protein complex assembly // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation /// 6886 // intracellular protein transport // inferred from electronic annotation /// 6897 // endocytosis // inferred from electronic annotation /// 15031 // protein transport // inferred from electronic annotation /// 6886 // intracellular protein transport // traceable author statement","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // traceable author statement /// 5794 // Golgi apparatus // inferred from direct assay /// 30136 // clathrin-coated vesicle // inferred from direct assay /// 16021 // integral to membrane // inferred from electronic annotation /// 5795 // Golgi stack // inferred from electronic annotation /// 5905 // coated pit // inferred from electronic annotation /// 30130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 5737 // cytoplasm // traceable author statement /// 5794 // Golgi apparatus // traceable author statement /// 30119 // membrane coat adaptor complex // traceable author statement","Gene.Ontology.Molecular.Function":"4089 // carbonate dehydratase activity // traceable author statement /// 8270 // zinc ion binding // traceable author statement /// 16829 // lyase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4089 // carbonate dehydratase activity // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 5488 // binding // inferred from electronic annotation /// 5215 // transporter activity // traceable author statement","Pathway":"Nitrogen metabolism // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001148 // Carbonic anhydrase, eukaryotic // 1.6E-86","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK000158(11),NM_001218(11),NM_206925(11)","Transcript.Assignments":"AL050025 // Homo sapiens mRNA; cDNA DKFZp564D066 (from clone DKFZp564D066). // gb // 11 // --- /// AK000158 // Homo sapiens cDNA FLJ20151 fis, clone COL08412. // gb // 11 // --- /// NM_001218 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_206925 // Homo sapiens carbonic anhydrase XII (CA12), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000178638 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10185.1 // ensembl_transcript // 11 // --- /// ENST00000344366 // cdna:known-ccds chromosome:NCBI36:15:61402784:61461128:-1 gene:ENSG00000074410 CCDS10186.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"15240"}
{"Probe.Set.ID":"206923_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4506066","Target.Description":"gb:NM_002737.1 /DEF=Homo sapiens protein kinase C, alpha (PRKCA), mRNA. /FEA=mRNA /GEN=PRKCA /PROD=protein kinase C, alpha /DB_XREF=gi:4506066 /UG=Hs.169449 protein kinase C, alpha /FL=gb:NM_002737.1","Representative.Public.ID":"NM_002737","Archival.UniGene.Cluster":"Hs.169449","UniGene.ID":"Hs.531704","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:61729408-62230818 (+) // 99.78 // q24.2","Gene.Title":"protein kinase C, alpha","Gene.Symbol":"PRKCA","Chromosomal.Location":"chr17q22-q23.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000154229","Entrez.Gene":"5578","SwissProt":"P17252 /// Q2TSD3 /// Q32M72 /// Q59FI5 /// Q7Z727","EC":"EC:2.7.1.37","OMIM":"176960","RefSeq.Protein.ID":"NP_002728.1","RefSeq.Transcript.ID":"NM_002737","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // traceable author statement /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7166 // cell surface receptor linked signal transduction // not recorded /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 8624 // induction of apoptosis by extracellular signals // traceable author statement","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4697 // protein kinase C activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP /// G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"hanks // 1.2.1 // AGC group; AGC I Diacylglycerol-activated/phospholipid-dependent protein kinase C (PKC) family; PKCa // 1.0E-154","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 2.4E-81 /// IPR000961 // Protein kinase C-terminal domain // 1.5E-43 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 3.1E-23 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 3.0E-25 /// IPR000008 // C2 domain // 1.2E-39 /// IPR000719 // Protein kinase // 2.3E-81","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002737(11)","Transcript.Assignments":"ENSESTT00000047730 // --- // ensembl_est // 11 // --- /// NM_002737 // Homo sapiens protein kinase C, alpha (PRKCA), mRNA. // refseq // 11 // --- /// ENST00000284384 // cdna:known-ccds chromosome:NCBI36:17:61729388:62237324:1 gene:ENSG00000154229 CCDS11664.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000014536 // ensembl_prediction // 5 // Cross Hyb Matching Probes /// GENSCAN00000061911 // ensembl_prediction // 2 // Cross Hyb Matching Probes","_row":"6449"}
{"Probe.Set.ID":"213093_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.80206.1","Target.Description":"Consensus includes gb:AI471375 /FEA=EST /DB_XREF=gi:4333465 /DB_XREF=est:tm10c12.x1 /CLONE=IMAGE:2156182 /UG=Hs.80206 glucose-6-phosphate dehydrogenase","Representative.Public.ID":"AI471375","Archival.UniGene.Cluster":"Hs.80206","UniGene.ID":"Hs.531704","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:62235503-62237322 (+) // 91.98 // q24.2","Gene.Title":"protein kinase C, alpha","Gene.Symbol":"PRKCA","Chromosomal.Location":"chr17q22-q23.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000154229","Entrez.Gene":"5578","SwissProt":"P11413 /// P17252 /// Q2TSD3 /// Q32M72 /// Q59FI5 /// Q7Z727","EC":"EC:2.7.1.37","OMIM":"176960","RefSeq.Protein.ID":"NP_002728.1","RefSeq.Transcript.ID":"NM_002737","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // traceable author statement /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7166 // cell surface receptor linked signal transduction // not recorded /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 8624 // induction of apoptosis by extracellular signals // traceable author statement /// 5975 // carbohydrate metabolism // inferred from electronic annotation /// 6006 // glucose metabolism // inferred from electronic annotation /// 6010 // glucose 6-phosphate utilization // traceable author statement /// 6098 // pentose-phosphate shunt // non-traceable author statement","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4697 // protein kinase C activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 4345 // glucose-6-phosphate 1-dehydrogenase activity // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4345 // glucose-6-phosphate 1-dehydrogenase activity // traceable author statement /// 4345 // glucose-6-phosphate 1-dehydrogenase activity // non-traceable author statement","Pathway":"Pentose_Phosphate_Pathway // GenMAPP /// G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP /// G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"hanks // 1.2.1 // AGC group; AGC I Diacylglycerol-activated/phospholipid-dependent protein kinase C (PKC) family; PKCa // 1.0E-154","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 2.4E-81 /// IPR000961 // Protein kinase C-terminal domain // 1.5E-43 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 3.1E-23 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 3.0E-25 /// IPR000008 // C2 domain // 1.2E-39 /// IPR001282 // Glucose-6-phosphate dehydrogenase // 1.0E-126 /// IPR001282 // Glucose-6-phosphate dehydrogenase // 6.0E-53 /// IPR000719 // Protein kinase // 2.3E-81","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002737(11)","Transcript.Assignments":"M12996 // Human glucose-6-phosphate dehydrogenase (G6PD) mRNA, 3' end. // gb // 11 // --- /// NM_002737 // Homo sapiens protein kinase C, alpha (PRKCA), mRNA. // refseq // 11 // --- /// ENST00000284384 // cdna:known-ccds chromosome:NCBI36:17:61729388:62237324:1 gene:ENSG00000154229 CCDS11664.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"12476"}
{"Probe.Set.ID":"215194_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.279856.0","Target.Description":"Consensus includes gb:AF035594.1 /DEF=Homo sapiens protein kinase C-alpha mRNA, partial 3 UTR. /FEA=mRNA /DB_XREF=gi:3168857 /UG=Hs.279856 Homo sapiens protein kinase C-alpha mRNA, partial 3 UTR","Representative.Public.ID":"AF035594","Archival.UniGene.Cluster":"Hs.279856","UniGene.ID":"---","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:62230763-62231898 (-) // 96.75 // q24.2","Gene.Title":"protein kinase C, alpha","Gene.Symbol":"PRKCA","Chromosomal.Location":"chr17q22-q23.2","Unigene.Cluster.Type":"---","Ensembl":"---","Entrez.Gene":"5578","SwissProt":"---","EC":"EC:2.7.1.37","OMIM":"176960","RefSeq.Protein.ID":"NP_002728.1","RefSeq.Transcript.ID":"NM_002737","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // traceable author statement /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7166 // cell surface receptor linked signal transduction // not recorded /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 8624 // induction of apoptosis by extracellular signals // traceable author statement","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4697 // protein kinase C activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AA017296,AF035594","Transcript.Assignments":"AA017296 // ze36a06.r1 Homo sapiens cDNA, 5' end /clone=IMAGE-361042 /clone_end=5' /gb=AA017296 /gi=1479457 /ug=Hs.179554 /len=181 // gb // --- // --- /// AA017296 // /DB_XREF=ze36a06.r1 /CLONE=IMAGE:361042 // gb // --- // --- /// AF035594 // Homo sapiens protein kinase C-alpha mRNA, partial 3' UTR /cds=UNKNOWN /gb=AF035594 /gi=3168857 /ug=Hs.179554 /len=1158 // gb // --- // --- /// AF035594 // /DEF=Homo sapiens protein kinase C-alpha mRNA, partial 3 prime UTR. // gb // --- // ---","Annotation.Notes":"ENSESTT00000047730 // ensembl_est // 2 // Negative Strand Matching Probes /// NM_002737 // refseq // 11 // Negative Strand Matching Probes /// ENST00000284384 // ensembl_transcript // 11 // Negative Strand Matching Probes","_row":"14568"}
{"Probe.Set.ID":"215195_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.279856.0","Target.Description":"Consensus includes gb:AF035594.1 /DEF=Homo sapiens protein kinase C-alpha mRNA, partial 3 UTR. /FEA=mRNA /DB_XREF=gi:3168857 /UG=Hs.279856 Homo sapiens protein kinase C-alpha mRNA, partial 3 UTR","Representative.Public.ID":"AF035594","Archival.UniGene.Cluster":"Hs.279856","UniGene.ID":"Hs.531704","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr17:62230763-62231896 (+) // 96.58 // q24.2","Gene.Title":"protein kinase C, alpha","Gene.Symbol":"PRKCA","Chromosomal.Location":"chr17q22-q23.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000154229","Entrez.Gene":"5578","SwissProt":"P17252 /// Q2TSD3 /// Q32M72 /// Q59FI5 /// Q7Z727","EC":"EC:2.7.1.37","OMIM":"176960","RefSeq.Protein.ID":"NP_002728.1","RefSeq.Transcript.ID":"NM_002737","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // traceable author statement /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7166 // cell surface receptor linked signal transduction // not recorded /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 8624 // induction of apoptosis by extracellular signals // traceable author statement","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4697 // protein kinase C activity // traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP /// G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"hanks // 1.2.1 // AGC group; AGC I Diacylglycerol-activated/phospholipid-dependent protein kinase C (PKC) family; PKCa // 1.0E-154","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 2.4E-81 /// IPR000961 // Protein kinase C-terminal domain // 1.5E-43 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 3.1E-23 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 3.0E-25 /// IPR000008 // C2 domain // 1.2E-39 /// IPR000719 // Protein kinase // 2.3E-81","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF035594(11),NM_002737(11)","Transcript.Assignments":"AF035594 // Homo sapiens protein kinase C-alpha mRNA, partial 3' UTR. // gb // 11 // --- /// NM_002737 // Homo sapiens protein kinase C, alpha (PRKCA), mRNA. // refseq // 11 // --- /// ENST00000284384 // cdna:known-ccds chromosome:NCBI36:17:61729388:62237324:1 gene:ENSG00000154229 CCDS11664.1 // ensembl_transcript // 10 // ---","Annotation.Notes":"---","_row":"14569"}
{"Probe.Set.ID":"205485_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g10863870","Target.Description":"gb:NM_000540.1 /DEF=Homo sapiens ryanodine receptor 1 (skeletal) (RYR1), mRNA. /FEA=mRNA /GEN=RYR1 /PROD=ryanodine receptor 1 (skeletal) /DB_XREF=gi:10863870 /UG=Hs.89631 ryanodine receptor 1 (skeletal) /FL=gb:NM_000540.1 gb:J05200.1","Representative.Public.ID":"NM_000540","Archival.UniGene.Cluster":"Hs.89631","UniGene.ID":"Hs.466664","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr19:43616179-43770012 (+) // 97.42 // q13.2","Gene.Title":"ryanodine receptor 1 (skeletal)","Gene.Symbol":"RYR1","Chromosomal.Location":"chr19q13.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000196218","Entrez.Gene":"6261","SwissProt":"O75591 /// P21817 /// Q59FN5","EC":"---","OMIM":"117000 /// 145600 /// 180901","RefSeq.Protein.ID":"NP_000531.1","RefSeq.Transcript.ID":"NM_000540","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6812 // cation transport // inferred from electronic annotation /// 6816 // calcium ion transport // traceable author statement /// 6874 // calcium ion homeostasis // inferred from electronic annotation /// 6936 // muscle contraction // traceable author statement /// 6816 // calcium ion transport // inferred from direct assay /// 10033 // response to organic substance // inferred from direct assay /// 6816 // calcium ion transport // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation /// 6811 // ion transport // inferred from electronic annotation /// 74 // regulation of progression through cell cycle // non-traceable author statement /// 6457 // protein folding // non-traceable author statement /// 6915 // apoptosis // non-traceable author statement /// 6928 // cell motility // non-traceable author statement /// 16485 // protein processing // non-traceable author statement /// 17157 // regulation of exocytosis // non-traceable author statement /// 19722 // calcium-mediated signaling // non-traceable author statement /// 19724 // B cell mediated immunity // non-traceable author statement /// 30100 // regulation of endocytosis // non-traceable author statement /// 30183 // B cell differentiation // non-traceable author statement /// 42100 // B cell proliferation // non-traceable author statement /// 45941 // positive regulation of transcription // non-traceable author statement","Gene.Ontology.Cellular.Component":"5790 // smooth endoplasmic reticulum // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 5219 // ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 15278 // calcium-release channel activity // traceable author statement /// 4872 // receptor activity // inferred from direct assay /// 5219 // ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 15085 // calcium ion transporter activity // inferred from direct assay /// 5262 // calcium channel activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5261 // cation channel activity // inferred from electronic annotation /// 4872 // receptor activity // not recorded","Pathway":"Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR005821 // Ion transport protein // 8.5E-13 /// IPR003032 // Ryanodine receptor Ryr // 3.0E-63 /// IPR003032 // Ryanodine receptor Ryr // 8.8E-60 /// IPR003032 // Ryanodine receptor Ryr // 1.2E-61 /// IPR003032 // Ryanodine receptor Ryr // 3.6E-49 /// IPR009460 // Ryanodine Receptor TM 4-6 // 1.9E-120 /// IPR000699 // Intracellular calcium-release channel // 4.7E-95 /// IPR000699 // Intracellular calcium-release channel // 5.5E-89 /// IPR003608 // MIR domain // 1.8E-4 /// IPR003608 // MIR domain // 7.7E-7 /// IPR003608 // MIR domain // 6.0E-12 /// IPR003608 // MIR domain // 2.0E-16 /// IPR003877 // SPla/RYanodine receptor SPRY // 4.4E-38 /// IPR003877 // SPla/RYanodine receptor SPRY // 5.7E-44 /// IPR003877 // SPla/RYanodine receptor SPRY // 8.5E-38 /// IPR005821 // Ion transport protein // 8.5E-13 /// IPR009460 // Ryanodine Receptor TM 4-6 // 1.9E-120 /// IPR005821 // Ion transport protein // 8.5E-13 /// IPR009460 // Ryanodine Receptor TM 4-6 // 1.9E-120 /// IPR005821 // Ion transport protein // 8.5E-13 /// IPR003032 // Ryanodine receptor Ryr // 7.2E-52 /// IPR009460 // Ryanodine Receptor TM 4-6 // 1.9E-120","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000540(11)","Transcript.Assignments":"ENSESTT00000094574 // --- // ensembl_est // 11 // --- /// ENSESTT00000094575 // --- // ensembl_est // 11 // --- /// NM_000540 // Homo sapiens ryanodine receptor 1 (skeletal) (RYR1), mRNA. // refseq // 11 // --- /// GENSCAN00000058745 // cdna:Genscan chromosome:NCBI36:19:43743593:43769900:1 // ensembl_prediction // 11 // --- /// ENST00000359596 // cdna:known chromosome:NCBI36:19:43616180:43770012:1 gene:ENSG00000196218 // ensembl_transcript // 11 // --- /// ENST00000355481 // cdna:known chromosome:NCBI36:19:43616180:43770012:1 gene:ENSG00000196218 // ensembl_transcript // 11 // --- /// ENST00000360985 // cdna:known chromosome:NCBI36:19:43616180:43770012:1 gene:ENSG00000196218 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"5012"}
{"Probe.Set.ID":"211703_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13625458","Target.Description":"gb:AF353990.1 /DEF=Homo sapiens beta-amyloid binding protein precursor (BBP) mRNA, complete cds.  /FEA=mRNA /GEN=BBP /PROD=beta-amyloid binding protein precursor /DB_XREF=gi:13625458 /FL=gb:AF353990.1","Representative.Public.ID":"AF353990","Archival.UniGene.Cluster":"--- /// Hs.900645","UniGene.ID":"Hs.276876","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:61919308-61963683 (-) // 99.84 // p31.3","Gene.Title":"TM2 domain containing 1 /// TM2 domain containing 1","Gene.Symbol":"TM2D1","Chromosomal.Location":"chr1p31.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000162604","Entrez.Gene":"83941","SwissProt":"Q9BX74","EC":"---","OMIM":"610080","RefSeq.Protein.ID":"NP_114416.1","RefSeq.Transcript.ID":"NM_032027","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR007829 // TM2 // 2.5E-22","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_032027(11)","Transcript.Assignments":"ENSESTT00000064597 // --- // ensembl_est // 9 // --- /// ENSESTT00000064599 // --- // ensembl_est // 9 // --- /// ENSESTT00000076247 // --- // ensembl_est // 11 // --- /// NM_032027 // Homo sapiens TM2 domain containing 1 (TM2D1), mRNA. // refseq // 11 // --- /// ENST00000371180 // cdna:known chromosome:NCBI36:1:61919305:61963683:-1 gene:ENSG00000162604 // ensembl_transcript // 11 // --- /// ENST00000294613 // cdna:novel chromosome:NCBI36:1:61919307:61963380:-1 gene:ENSG00000162604 // ensembl_transcript // 11 // --- /// ENST00000371178 // cdna:novel chromosome:NCBI36:1:61932414:61963380:-1 gene:ENSG00000162604 // ensembl_transcript // 9 // ---","Annotation.Notes":"ENSESTT00000064598 // ensembl_est // 7 // Cross Hyb Matching Probes /// ENSESTT00000076248 // ensembl_est // 8 // Cross Hyb Matching Probes /// ENSESTT00000076249 // ensembl_est // 1 // Cross Hyb Matching Probes /// ENST00000371177 // ensembl_transcript // 7 // Cross Hyb Matching Probes","_row":"11104"}
{"Probe.Set.ID":"212963_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.180532.3","Target.Description":"Consensus includes gb:BF968960 /FEA=EST /DB_XREF=gi:12336175 /DB_XREF=est:602270156F1 /CLONE=IMAGE:4358628 /UG=Hs.180532 glucose phosphate isomerase","Representative.Public.ID":"BF968960","Archival.UniGene.Cluster":"Hs.180532","UniGene.ID":"Hs.276876","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:61919305-61963377 (+) // 93.38 // p31.3","Gene.Title":"TM2 domain containing 1","Gene.Symbol":"TM2D1","Chromosomal.Location":"chr1p31.3","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"83941","SwissProt":"Q9BX74","EC":"---","OMIM":"610080","RefSeq.Protein.ID":"NP_114416.1","RefSeq.Transcript.ID":"NM_032027","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 75 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AI066635,AI680904,AI309219,BE245656,BF058811,AI350984,AA306979,AA345598,AA758727,BE176800,AI299154,R99199,AI216293,AW008841,AI903940,AA455995,N36461,BE467256,AA975953,AA018824,BE176813,AI057115,BE176788,AI903938,AW965195,AI168073,AA719267,AV650538,AA252976,N34957,BE549799,AW965183,AI014369,BE886844,AW197899,BF692101,Z38337,AA143183,N28591,R99200,AI680969,D81006,AI349520,BE176984,AI364199,BE467235,AI674462,AI903935,AW197789,W45517,AI038331,BF968960,AI217177,BF515777,AW140060,AI299329,D81362,AI682204,AI923178,AI732252,AI245878,AA253249,BE348755,BE328144,AW071521,R32646,AA757905,BE972611,AI479764,AA031567,AW079428,AI580361,AA302725,AA772225,AA757694","Transcript.Assignments":"AA018824 // /DB_XREF=ze57e09.s1 /CLONE=IMAGE:363112 // gb // --- // --- /// AA031567 // zk16b10.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-470683 /clone_end=3' /gb=AA031567 /gi=1501632 /ug=Hs.173063 /len=303 // gb // --- // --- /// AA031567 // /DB_XREF=zk16b10.s1 /CLONE=IMAGE:470683 // gb // --- // --- /// AA143183 // /DB_XREF=zl49h02.r1 /CLONE=IMAGE:505299 // gb // --- // --- /// AA252976 // zr53a03.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-667084 /clone_end=3' /gb=AA252976 /gi=1882851 /ug=Hs.173063 /len=401 // gb // --- // --- /// AA252976 // /DB_XREF=zr53a03.s1 /CLONE=IMAGE:667084 // gb // --- // --- /// AA253249 // zr53a03.r1 Homo sapiens cDNA, 5' end /clone=IMAGE-667084 /clone_end=5' /gb=AA253249 /gi=1882958 /ug=Hs.173063 /len=216 // gb // --- // --- /// AA253249 // /DB_XREF=zr53a03.r1 /CLONE=IMAGE:667084 // gb // --- // --- /// AA302725 // EST10259 Homo sapiens cDNA, 3' end /clone=ATCC-194748 /clone_end=3' /gb=AA302725 /gi=1955056 /ug=Hs.173063 /len=238 // gb // --- // --- /// AA302725 // /DB_XREF=EST10259 // gb // --- // --- /// AA306979 // EST178050 Homo sapiens cDNA, 5' end /clone=ATCC-108677 /clone_end=5' /gb=AA306979 /gi=1959469 /ug=Hs.173063 /len=475 // gb // --- // --- /// AA306979 // EST178050 Homo sapiens cDNA, 5' end /contact=A.R.Kerlavage /clone=ATCC:108677 /clone_end=5' /gb=AA306979 /gi=1959469 /len=475 // gb // --- // --- /// AA306979 // /DB_XREF=EST178050 // gb // --- // --- /// AA345598 // EST51648 Homo sapiens cDNA, 5' end /clone=ATCC-147134 /clone_end=5' /gb=AA345598 /gi=1997846 /ug=Hs.173063 /len=382 // gb // --- // --- /// AA345598 // EST51648 Homo sapiens cDNA, 5' end /contact=A.R.Kerlavage /clone=ATCC:147134 /clone_end=5' /gb=AA345598 /gi=1997846 /len=382 // gb // --- // --- /// AA345598 // /DB_XREF=EST51648 // gb // --- // --- /// AA455995 // aa02d05.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-812073 /clone_end=3' /gb=AA455995 /gi=2178771 /ug=Hs.173063 /len=264 // gb // --- // --- /// AA455995 // /DB_XREF=aa02d05.s1 /CLONE=IMAGE:812073 // gb // --- // --- /// AA719267 // ah46h12.s1 Homo sapiens cDNA, 3' end /clone=1292615 /clone_end=3' /gb=AA719267 /gi=2732366 /ug=Hs.173063 /len=388 // gb // --- // --- /// AA719267 // /DB_XREF=ah46h12.s1 /CLONE=1292615 // gb // --- // --- /// AA757694 // /DB_XREF=zg38h03.s1 /CLONE=IMAGE:395669 // gb // --- // --- /// AA757905 // /DB_XREF=zg42h09.s1 /CLONE=IMAGE:396065 // gb // --- // --- /// AA758727 // ah75f09.s1 Homo sapiens cDNA, 3' end /clone=1321481 /clone_end=3' /gb=AA758727 /gi=2806590 /ug=Hs.173063 /len=232 // gb // --- // --- /// AA758727 // /DB_XREF=ah75f09.s1 /CLONE=1321481 // gb // --- // --- /// AA772225 // /DB_XREF=ai41c01.s1 /CLONE=1359552 // gb // --- // --- /// AA975953 // oo34b03.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-1568045 /clone_end=3' /gb=AA975953 /gi=3151745 /ug=Hs.173063 /len=275 // gb // --- // --- /// AA975953 // /DB_XREF=oo34b03.s1 /CLONE=IMAGE:1568045 // gb // --- // --- /// AI014369 // os75e05.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-1611200 /clone_end=3' /gb=AI014369 /gi=3228750 /ug=Hs.173063 /len=426 // gb // --- // --- /// AI014369 // /DB_XREF=os75e05.s1 /CLONE=IMAGE:1611200 // gb // --- // --- /// AI038331 // /DB_XREF=ox84a06.x1 /CLONE=IMAGE:1662994 // gb // --- // --- /// AI057115 // oz23g10.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-1676226 /clone_end=3' /gb=AI057115 /gi=3330991 /ug=Hs.173063 /len=632 // gb // --- // --- /// AI057115 // /DB_XREF=oz23g10.x1 /CLONE=IMAGE:1676226 // gb // --- // --- /// AI066635 // oz82c10.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-1681842 /clone_end=3' /gb=AI066635 /gi=3367337 /ug=Hs.173063 /len=450 // gb // --- // --- /// AI066635 // /DB_XREF=oz82c10.x1 /CLONE=IMAGE:1681842 // gb // --- // --- /// AI168073 // /DB_XREF=oz89c02.x1 /CLONE=IMAGE:1682498 // gb // --- // --- /// AI216293 // qg76c03.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-1841092 /clone_end=3' /gb=AI216293 /gi=3785334 /ug=Hs.173063 /len=338 // gb // --- // --- /// AI216293 // /DB_XREF=qg76c03.x1 /CLONE=IMAGE:1841092 // gb // --- // --- /// AI217177 // qf47h07.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-1753213 /clone_end=3' /gb=AI217177 /gi=3796992 /ug=Hs.173063 /len=421 // gb // --- // --- /// AI217177 // /DB_XREF=qf47h07.x1 /CLONE=IMAGE:1753213 // gb // --- // --- /// AI245878 // /DB_XREF=qk27f08.x1 /CLONE=IMAGE:1870215 // gb // --- // --- /// AI299154 // /DB_XREF=qm96f11.x1 /CLONE=IMAGE:1896621 // gb // --- // --- /// AI299329 // /DB_XREF=qn22c06.x1 /CLONE=IMAGE:1898986 // gb // --- // --- /// AI309219 // /DB_XREF=qo68a03.x1 /CLONE=IMAGE:1913644 // gb // --- // --- /// AI349520 // /DB_XREF=qp72g05.x1 /CLONE=IMAGE:1928600 // gb // --- // --- /// AI350984 // qq36a12.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-1934590 /clone_end=3' /gb=AI350984 /gi=4088190 /ug=Hs.173063 /len=323 // gb // --- // --- /// AI350984 // /DB_XREF=qq36a12.x1 /CLONE=IMAGE:1934590 // gb // --- // --- /// AI364199 // qw35g10.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-1993122 /clone_end=3' /gb=AI364199 /gi=4123888 /ug=Hs.173063 /len=224 // gb // --- // --- /// AI364199 // /DB_XREF=qw35g10.x1 /CLONE=IMAGE:1993122 // gb // --- // --- /// AI479764 // /DB_XREF=tm69b04.x1 /CLONE=IMAGE:2163343 // gb // --- // --- /// AI580361 // /DB_XREF=tm47h02.x1 /CLONE=IMAGE:2161299 // gb // --- // --- /// AI674462 // /DB_XREF=wc44e01.x1 /CLONE=IMAGE:2321496 // gb // --- // --- /// AI680904 // /DB_XREF=tx42f05.x1 /CLONE=IMAGE:2272257 // gb // --- // --- /// AI680969 // /DB_XREF=tx35h07.x1 /CLONE=IMAGE:2271613 // gb // --- // --- /// AI682204 // /DB_XREF=wa71b06.x1 /CLONE=IMAGE:2301587 // gb // --- // --- /// AI732252 // ye35c09.x5 Homo sapiens cDNA, 3' end /clone=IMAGE-119728 /clone_end=3' /gb=AI732252 /gi=5053365 /ug=Hs.173063 /len=482 // gb // --- // --- /// AI732252 // /DB_XREF=ye35c09.x5 /CLONE=IMAGE:119728 // gb // --- // --- /// AI903935 // /DB_XREF=MR-BT038-080199-049 // gb // --- // --- /// AI903938 // /DB_XREF=MR-BT038-080199-035 // gb // --- // --- /// AI903940 // /DB_XREF=MR-BT038-080199-018 // gb // --- // --- /// AI923178 // /DB_XREF=wn67b10.x1 /CLONE=IMAGE:2450491 // gb // --- // --- /// AV650538 // /DB_XREF=AV650538 /CLONE=GLCCFH05 // gb // --- // --- /// AW008841 // ws72h12.x1 Homo sapiens cDNA, 3' end /clone=IMAGE-2502791 /clone_end=3' /gb=AW008841 /gi=5857619 /ug=Hs.173063 /len=403 // gb // --- // --- /// AW008841 // /DB_XREF=ws72h12.x1 /CLONE=IMAGE:2502791 // gb // --- // --- /// AW071521 // /DB_XREF=xa36a07.x1 /CLONE=IMAGE:2568852 // gb // --- // --- /// AW079428 // /DB_XREF=xc17d04.x1 /CLONE=IMAGE:2584519 // gb // --- // --- /// AW140060 // /DB_XREF=UI-H-BI1-aef-a-05-0-UI.s1 /CLONE=IMAGE:2718993 // gb // --- // --- /// AW197789 // /DB_XREF=xn88e12.x1 /CLONE=IMAGE:2701582 // gb // --- // --- /// AW197899 // /DB_XREF=xn89g12.x1 /CLONE=IMAGE:2701702 // gb // --- // --- /// AW965183 // /DB_XREF=EST377256 // gb // --- // --- /// AW965195 // /DB_XREF=EST377268 // gb // --- // --- /// BE176788 // /DB_XREF=RC4-HT0587-100300-011-d09 // gb // --- // --- /// BE176800 // /DB_XREF=RC4-HT0587-100300-011-h07 // gb // --- // --- /// BE176813 // /DB_XREF=RC4-HT0587-100300-011-h09 // gb // --- // --- /// BE176984 // /DB_XREF=RC4-HT0587-240300-013-e01 // gb // --- // --- /// BE245656 // /DB_XREF=TCBAP1D3118 /CLONE=TCBAP3118 // gb // --- // --- /// BE328144 // /DB_XREF=ht97f11.x1 /CLONE=IMAGE:3165069 // gb // --- // --- /// BE348755 // /DB_XREF=ht70b01.x1 /CLONE=IMAGE:3152041 // gb // --- // --- /// BE467235 // /DB_XREF=hz63d03.x1 /CLONE=IMAGE:3212645 // gb // --- // --- /// BE467256 // /DB_XREF=hz63f03.x1 /CLONE=IMAGE:3212669 // gb // --- // --- /// BE549799 // /DB_XREF=7b38g08.x1 /CLONE=IMAGE:3230558 // gb // --- // --- /// BE886844 // /DB_XREF=601507817F1 /CLONE=IMAGE:3909388 // gb // --- // --- /// BE972611 // /DB_XREF=601652508F1 /CLONE=IMAGE:3935856 // gb // --- // --- /// BF058811 // /DB_XREF=7k25d03.x1 /CLONE=IMAGE:3476404 // gb // --- // --- /// BF515777 // /DB_XREF=UI-H-BW1-ano-h-04-0-UI.s1 /CLONE=IMAGE:3082999 // gb // --- // --- /// BF692101 // /DB_XREF=602247882F1 /CLONE=IMAGE:4333005 // gb // --- // --- /// BF968960 // /DB_XREF=602270156F1 /CLONE=IMAGE:4358628 // gb // --- // --- /// D81006 // HUM123D02B Homo sapiens cDNA, 5' end /clone=GEN-123D02 /clone_end=5' /gb=D81006 /gi=1178883 /ug=Hs.173063 /len=328 // gb // --- // --- /// D81006 // HUM123D02B Homo sapiens cDNA, 5' end /contact=T.Fujiwara /clone=GEN-123D02 /clone_end=5' /gb=D81006 /gi=1178883 /len=328 // gb // --- // --- /// D81006 // /DB_XREF=HUM123D02B /CLONE=GEN-123D02 // gb // --- // --- /// D81362 // HUM159G08B Homo sapiens cDNA, 5' end /clone=GEN-159G08 /clone_end=5' /gb=D81362 /gi=1179239 /ug=Hs.173063 /len=385 // gb // --- // --- /// D81362 // HUM159G08B Homo sapiens cDNA, 5' end /contact=T.Fujiwara /clone=GEN-159G08 /clone_end=5' /gb=D81362 /gi=1179239 /len=385 // gb // --- // --- /// D81362 // /DB_XREF=HUM159G08B /CLONE=GEN-159G08 // gb // --- // --- /// N28591 // yx38c03.r1 Homo sapiens cDNA, 5' end /contact=R.K.Wilson /clone=264004 /clone_end=5' /gb=N28591 /gi=1146827 /len=480 // gb // --- // --- /// N28591 // /DB_XREF=yx38c03.r1 /CLONE=IMAGE:264004 // gb // --- // --- /// N34957 // /DB_XREF=yy50b11.s1 /CLONE=IMAGE:276957 // gb // --- // --- /// N36461 // yx83e05.r1 Homo sapiens cDNA, 5' end /clone=IMAGE-268352 /clone_end=5' /gb=N36461 /gi=1157603 /ug=Hs.173063 /len=252 // gb // --- // --- /// N36461 // /DB_XREF=yx83e05.r1 /CLONE=IMAGE:268352 // gb // --- // --- /// R32646 // yh38c12.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-132022 /clone_end=3' /gb=R32646 /gi=788489 /ug=Hs.173063 /len=206 // gb // --- // --- /// R32646 // /DB_XREF=yh38c12.s1 /CLONE=IMAGE:132022 // gb // --- // --- /// R99199 // yq64d10.r1 Homo sapiens cDNA, 5' end /contact=R.K.Wilson /clone=200563 /clone_end=5' /gb=R99199 /gi=985800 /len=580 // gb // --- // --- /// R99199 // /DB_XREF=yq64d10.r1 /CLONE=IMAGE:200563 // gb // --- // --- /// R99200 // yq64d10.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-200563 /clone_end=3' /gb=R99200 /gi=985801 /ug=Hs.173063 /len=394 // gb // --- // --- /// R99200 // /DB_XREF=yq64d10.s1 /CLONE=IMAGE:200563 // gb // --- // --- /// W45517 // zc27h04.s1 Homo sapiens cDNA, 3' end /clone=IMAGE-323575 /clone_end=3' /gb=W45517 /gi=1329829 /ug=Hs.173063 /len=447 // gb // --- // --- /// W45517 // /DB_XREF=zc27h04.s1 /CLONE=IMAGE:323575 // gb // --- // --- /// Z38337 // HSC07B022 Homo sapiens cDNA, 3' end /clone=c-07b02 /clone_end=3' /gb=Z38337 /gi=560345 /ug=Hs.173063 /len=165 // gb // --- // --- /// Z38337 // /DB_XREF=HSC07B022 /CLONE=c-07b02 // gb // --- // ---","Annotation.Notes":"ENSESTT00000064597 // ensembl_est // 7 // Negative Strand Matching Probes /// ENSESTT00000064598 // ensembl_est // 6 // Negative Strand Matching Probes /// ENSESTT00000064599 // ensembl_est // 8 // Negative Strand Matching Probes /// ENSESTT00000076247 // ensembl_est // 6 // Negative Strand Matching Probes /// ENSESTT00000076248 // ensembl_est // 4 // Negative Strand Matching Probes /// ENSESTT00000076249 // ensembl_est // 2 // Negative Strand Matching Probes /// NM_032027 // refseq // 11 // Negative Strand Matching Probes /// GENSCAN00000057590 // ensembl_prediction // 3 // Negative Strand Matching Probes /// ENST00000371180 // ensembl_transcript // 11 // Negative Strand Matching Probes /// ENST00000294613 // ensembl_transcript // 10 // Negative Strand Matching Probes /// ENST00000371178 // ensembl_transcript // 9 // Negative Strand Matching Probes /// ENST00000371177 // ensembl_transcript // 8 // Negative Strand Matching Probes","_row":"12346"}
{"Probe.Set.ID":"213882_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.180532.5","Target.Description":"Consensus includes gb:AA012917 /FEA=EST /DB_XREF=gi:1473944 /DB_XREF=est:ze27c03.s1 /CLONE=IMAGE:360196 /UG=Hs.180532 glucose phosphate isomerase","Representative.Public.ID":"AA012917","Archival.UniGene.Cluster":"Hs.180532","UniGene.ID":"Hs.276876","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:61919306-61920667 (-) // 63.87 // p31.3","Gene.Title":"TM2 domain containing 1","Gene.Symbol":"TM2D1","Chromosomal.Location":"chr1p31.3","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"83941","SwissProt":"Q9BX74","EC":"---","OMIM":"610080","RefSeq.Protein.ID":"NP_114416.1","RefSeq.Transcript.ID":"NM_032027","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Accession mapped clusters based pipeline to a UniGene identifier using 21 transcripts. // false // Accession mapped clusters // E","Annotation.Transcript.Cluster":"AA012917,AW873587,AW391215,AI373710,AA760675,AW582156,AA441857,AV682391,AA031566,BE972539,AI702661,AA150686,AW889776,AA151007,BF477556,AW612306,R23573,AW195865,AW182809,AI342734,AI554871","Transcript.Assignments":"AA012917 // /DB_XREF=ze27c03.s1 /CLONE=IMAGE:360196 // gb // --- // --- /// AA031566 // /DB_XREF=zk16b10.r1 /CLONE=IMAGE:470683 // gb // --- // --- /// AA150686 // /DB_XREF=zl47a05.s1 /CLONE=IMAGE:505040 // gb // --- // --- /// AA151007 // /DB_XREF=zl47a05.r1 /CLONE=IMAGE:505040 // gb // --- // --- /// AA441857 // /DB_XREF=zw62a10.s1 /CLONE=IMAGE:774618 // gb // --- // --- /// AA760675 // /DB_XREF=nz09c10.s1 /CLONE=IMAGE:1287282 // gb // --- // --- /// AI342734 // /DB_XREF=qo26a10.x1 /CLONE=IMAGE:1909626 // gb // --- // --- /// AI373710 // /DB_XREF=qz97c11.x1 /CLONE=IMAGE:2042516 // gb // --- // --- /// AI554871 // /DB_XREF=te45d06.x1 /CLONE=IMAGE:2089643 // gb // --- // --- /// AI702661 // /DB_XREF=we06d06.x1 /CLONE=IMAGE:2340299 // gb // --- // --- /// AV682391 // /DB_XREF=AV682391 /CLONE=GKBALE08 // gb // --- // --- /// AW182809 // /DB_XREF=xj64b06.x1 /CLONE=IMAGE:2661971 // gb // --- // --- /// AW195865 // /DB_XREF=xn86b01.x1 /CLONE=IMAGE:2701321 // gb // --- // --- /// AW391215 // /DB_XREF=MR3-ST0203-231299-022-g02 // gb // --- // --- /// AW582156 // /DB_XREF=MR3-ST0203-040100-022-g02 // gb // --- // --- /// AW612306 // /DB_XREF=hg95d10.x1 /CLONE=IMAGE:2953363 // gb // --- // --- /// AW873587 // /DB_XREF=ho62f10.x1 /CLONE=IMAGE:3041995 // gb // --- // --- /// AW889776 // /DB_XREF=RC1-NT0033-110500-012-f02 // gb // --- // --- /// BE972539 // /DB_XREF=601651914F1 /CLONE=IMAGE:3935355 // gb // --- // --- /// BF477556 // /DB_XREF=7q98d03.x1 /CLONE=IMAGE:3706397 // gb // --- // --- /// R23573 // /DB_XREF=yh38c12.r1 /CLONE=IMAGE:132022 // gb // --- // ---","Annotation.Notes":"---","_row":"13262"}
{"Probe.Set.ID":"213883_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.180532.5","Target.Description":"Consensus includes gb:AA012917 /FEA=EST /DB_XREF=gi:1473944 /DB_XREF=est:ze27c03.s1 /CLONE=IMAGE:360196 /UG=Hs.180532 glucose phosphate isomerase","Representative.Public.ID":"AA012917","Archival.UniGene.Cluster":"Hs.180532","UniGene.ID":"Hs.276876","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:61919306-61920667 (-) // 63.87 // p31.3","Gene.Title":"TM2 domain containing 1","Gene.Symbol":"TM2D1","Chromosomal.Location":"chr1p31.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000162604","Entrez.Gene":"83941","SwissProt":"Q9BX74","EC":"---","OMIM":"610080","RefSeq.Protein.ID":"NP_114416.1","RefSeq.Transcript.ID":"NM_032027","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR007829 // TM2 // 2.5E-22","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_032027(11)","Transcript.Assignments":"ENSESTT00000076247 // --- // ensembl_est // 11 // --- /// ENSESTT00000076248 // --- // ensembl_est // 11 // --- /// ENSESTT00000076249 // --- // ensembl_est // 11 // --- /// NM_032027 // Homo sapiens TM2 domain containing 1 (TM2D1), mRNA. // refseq // 11 // --- /// ENST00000371180 // cdna:known chromosome:NCBI36:1:61919305:61963683:-1 gene:ENSG00000162604 // ensembl_transcript // 11 // --- /// ENST00000294613 // cdna:novel chromosome:NCBI36:1:61919307:61963380:-1 gene:ENSG00000162604 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"13263"}
{"Probe.Set.ID":"219370_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g9790192","Target.Description":"gb:NM_019845.1 /DEF=Homo sapiens candidate mediator of the p53-dependent G2 arrest (REPRIMO), mRNA.  /FEA=mRNA /GEN=REPRIMO /PROD=candidate mediator of the p53-dependent G2arrest /DB_XREF=gi:9790192 /UG=Hs.100890 candidate mediator of the p53-dependent G2 arrest /FL=gb:BC002908.1 gb:AB043585.1 gb:NM_019845.1","Representative.Public.ID":"NM_019845","Archival.UniGene.Cluster":"Hs.100890","UniGene.ID":"Hs.100890","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:154042098-154043568 (-) // 96.69 // q23.3","Gene.Title":"reprimo, TP53 dependent G2 arrest mediator candidate","Gene.Symbol":"RPRM","Chromosomal.Location":"chr2q23.3","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"56475","SwissProt":"Q9NS64","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_062819.1","RefSeq.Transcript.ID":"NM_019845","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7050 // cell cycle arrest // traceable author statement","Gene.Ontology.Cellular.Component":"5737 // cytoplasm // traceable author statement","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_019845(11)","Transcript.Assignments":"NM_019845 // Homo sapiens reprimo, TP53 dependent G2 arrest mediator candidate (RPRM), mRNA. // refseq // 11 // ---","Annotation.Notes":"---","_row":"18734"}
{"Probe.Set.ID":"200831_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.119597.0","Target.Description":"Consensus includes gb:AA678241 /FEA=EST /DB_XREF=gi:2658763 /DB_XREF=est:zi27a06.s1 /CLONE=IMAGE:431986 /UG=Hs.119597 stearoyl-CoA desaturase (delta-9-desaturase) /FL=gb:AF097514.1 gb:NM_005063.1 gb:AB032261.1","Representative.Public.ID":"AA678241","Archival.UniGene.Cluster":"Hs.119597","UniGene.ID":"Hs.558396","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:102096870-102114573 (+) // 91.09 // q24.31 /// chr17:20628169-20633526 (+) // 87.05 // p11.2","Gene.Title":"stearoyl-CoA desaturase (delta-9-desaturase)","Gene.Symbol":"SCD","Chromosomal.Location":"chr10q23-q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000099194","Entrez.Gene":"6319","SwissProt":"O00767 /// Q59GX7 /// Q5QTQ8","EC":"EC:1.14.99.5","OMIM":"604031","RefSeq.Protein.ID":"NP_005054.3","RefSeq.Transcript.ID":"NM_005063","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6633 // fatty acid biosynthesis // inferred from electronic annotation /// 8610 // lipid biosynthesis // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5783 // endoplasmic reticulum // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 4768 // stearoyl-CoA 9-desaturase activity // traceable author statement /// 5506 // iron ion binding // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 16717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation","Pathway":"Fatty_Acid_Synthesis // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.5E-79 /// IPR005804 // Fatty acid desaturase // 1.5E-79","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005063(11)","Transcript.Assignments":"NM_005063 // Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase) (SCD), mRNA. // refseq // 11 // --- /// ENST00000370355 // cdna:known-ccds chromosome:NCBI36:10:102096762:102114577:1 gene:ENSG00000099194 CCDS7493.1 // ensembl_transcript // 11 // --- /// ENST00000266053 // cdna:known chromosome:NCBI36:10:102096871:102114581:1 gene:ENSG00000099194 // ensembl_transcript // 11 // ---","Annotation.Notes":"NM_178349 // refseq // 1 // Cross Hyb Matching Probes /// ENST00000360090 // ensembl_transcript // 1 // Cross Hyb Matching Probes","_row":"359"}
{"Probe.Set.ID":"200832_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7415720","Target.Description":"gb:AB032261.1 /DEF=Homo sapiens Scd mRNA for stearoyl-CoA desaturase, complete cds. /FEA=mRNA /GEN=Scd /PROD=stearoyl-CoA desaturase /DB_XREF=gi:7415720 /UG=Hs.119597 stearoyl-CoA desaturase (delta-9-desaturase) /FL=gb:AF097514.1 gb:NM_005063.1 gb:AB032261.1","Representative.Public.ID":"AB032261","Archival.UniGene.Cluster":"Hs.119597","UniGene.ID":"Hs.558396","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:102096870-102114581 (+) // 93.21 // q24.31 /// chr17:20628169-20633519 (+) // 88.72 // p11.2","Gene.Title":"stearoyl-CoA desaturase (delta-9-desaturase)","Gene.Symbol":"SCD","Chromosomal.Location":"chr10q23-q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000099194","Entrez.Gene":"6319","SwissProt":"O00767 /// Q59GX7 /// Q5QTQ8","EC":"EC:1.14.99.5","OMIM":"604031","RefSeq.Protein.ID":"NP_005054.3","RefSeq.Transcript.ID":"NM_005063","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6633 // fatty acid biosynthesis // inferred from electronic annotation /// 8610 // lipid biosynthesis // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5783 // endoplasmic reticulum // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 4768 // stearoyl-CoA 9-desaturase activity // traceable author statement /// 5506 // iron ion binding // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 16717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation","Pathway":"Fatty_Acid_Synthesis // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.5E-79 /// IPR005804 // Fatty acid desaturase // 1.5E-79","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005063(11)","Transcript.Assignments":"AF113690 // Homo sapiens clone FLB4718. // gb // 11 // --- /// NM_005063 // Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase) (SCD), mRNA. // refseq // 11 // --- /// ENST00000370355 // cdna:known-ccds chromosome:NCBI36:10:102096762:102114577:1 gene:ENSG00000099194 CCDS7493.1 // ensembl_transcript // 11 // --- /// ENST00000266053 // cdna:known chromosome:NCBI36:10:102096871:102114581:1 gene:ENSG00000099194 // ensembl_transcript // 11 // ---","Annotation.Notes":"CR618823 // gb // 5 // Cross Hyb Matching Probes /// U06715 // gb // 1 // Cross Hyb Matching Probes /// AF132203 // gb // 11 // Negative Strand Matching Probes /// ENST00000238971 // ensembl_transcript // 7 // Negative Strand Matching Probes","_row":"360"}
{"Probe.Set.ID":"211162_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7959734","Target.Description":"gb:AF116616.1 /DEF=Homo sapiens PRO0998 mRNA, complete cds. /FEA=mRNA /PROD=PRO0998 /DB_XREF=gi:7959734 /UG=Hs.119597 stearoyl-CoA desaturase (delta-9-desaturase) /FL=gb:AF116616.1","Representative.Public.ID":"AF116616","Archival.UniGene.Cluster":"Hs.119597","UniGene.ID":"Hs.558396","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:102097816-102110969 (+) // 81.02 // q24.31 /// chr17:20628582-20629921 (+) // 78.35 // p11.2","Gene.Title":"stearoyl-CoA desaturase (delta-9-desaturase)","Gene.Symbol":"SCD","Chromosomal.Location":"chr10q23-q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000099194","Entrez.Gene":"6319","SwissProt":"O00767 /// Q59GX7 /// Q5QTQ8","EC":"EC:1.14.99.5","OMIM":"604031","RefSeq.Protein.ID":"NP_005054.3","RefSeq.Transcript.ID":"NM_005063","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6633 // fatty acid biosynthesis // inferred from electronic annotation /// 8610 // lipid biosynthesis // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5783 // endoplasmic reticulum // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 4768 // stearoyl-CoA 9-desaturase activity // traceable author statement /// 5506 // iron ion binding // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 16717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation","Pathway":"Fatty_Acid_Synthesis // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.5E-79 /// IPR005804 // Fatty acid desaturase // 1.5E-79","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005063(11)","Transcript.Assignments":"ENSESTT00000046348 // --- // ensembl_est // 9 // --- /// NM_005063 // Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase) (SCD), mRNA. // refseq // 11 // --- /// ENST00000370355 // cdna:known-ccds chromosome:NCBI36:10:102096762:102114577:1 gene:ENSG00000099194 CCDS7493.1 // ensembl_transcript // 11 // --- /// ENST00000266053 // cdna:known chromosome:NCBI36:10:102096871:102114581:1 gene:ENSG00000099194 // ensembl_transcript // 11 // ---","Annotation.Notes":"BC005807 // gb // 7 // Cross Hyb Matching Probes /// GENSCAN00000056040 // ensembl_prediction // 7 // Cross Hyb Matching Probes /// GENSCAN00000036486 // ensembl_prediction // 3 // Cross Hyb Matching Probes /// AF116616 // gb // 11 // Negative Strand Matching Probes","_row":"10604"}
{"Probe.Set.ID":"211708_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13543283","Target.Description":"gb:BC005807.1 /DEF=Homo sapiens, clone MGC:10264, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:10264) /DB_XREF=gi:13543283 /FL=gb:BC005807.1","Representative.Public.ID":"BC005807","Archival.UniGene.Cluster":"--- /// Hs.900689","UniGene.ID":"Hs.558396","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:102097074-102110667 (+) // 94.03 // q24.31 /// chr17:20628373-20629619 (+) // 90.93 // p11.2","Gene.Title":"stearoyl-CoA desaturase (delta-9-desaturase) /// stearoyl-CoA desaturase (delta-9-desaturase)","Gene.Symbol":"SCD","Chromosomal.Location":"chr10q23-q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000099194","Entrez.Gene":"6319","SwissProt":"O00767 /// Q59GX7 /// Q5QTQ8","EC":"EC:1.14.99.5","OMIM":"604031","RefSeq.Protein.ID":"NP_005054.3","RefSeq.Transcript.ID":"NM_005063","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6633 // fatty acid biosynthesis // inferred from electronic annotation /// 8610 // lipid biosynthesis // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5783 // endoplasmic reticulum // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 4768 // stearoyl-CoA 9-desaturase activity // traceable author statement /// 5506 // iron ion binding // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 16717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation","Pathway":"Fatty_Acid_Synthesis // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.5E-79 /// IPR005804 // Fatty acid desaturase // 1.5E-79","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC005807(11),NM_005063(11)","Transcript.Assignments":"BC005807 // Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase), mRNA (cDNA clone MGC:10264 IMAGE:3844850), complete cds. // gb // 11 // --- /// NM_005063 // Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase) (SCD), mRNA. // refseq // 11 // --- /// GENSCAN00000056040 // cdna:Genscan chromosome:NCBI36:10:102097252:102110680:1 // ensembl_prediction // 11 // --- /// ENST00000370355 // cdna:known-ccds chromosome:NCBI36:10:102096762:102114577:1 gene:ENSG00000099194 CCDS7493.1 // ensembl_transcript // 11 // --- /// ENST00000266053 // cdna:known chromosome:NCBI36:10:102096871:102114581:1 gene:ENSG00000099194 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000046347 // ensembl_est // 1 // Cross Hyb Matching Probes /// ENSESTT00000046348 // ensembl_est // 5 // Cross Hyb Matching Probes /// S70284 // gb // 1 // Cross Hyb Matching Probes /// GENSCAN00000036486 // ensembl_prediction // 5 // Cross Hyb Matching Probes /// AF116616 // gb // 11 // Negative Strand Matching Probes","_row":"11109"}
{"Probe.Set.ID":"212731_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.11506.0","Target.Description":"Consensus includes gb:U79297.1 /DEF=Human clone 23589 mRNA sequence. /FEA=mRNA /DB_XREF=gi:1710280 /UG=Hs.11506 Human clone 23589 mRNA sequence","Representative.Public.ID":"U79297","Archival.UniGene.Cluster":"Hs.11506","UniGene.ID":"Hs.530199","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr8:101602177-101641163 (-) // 98.99 // q22.3","Gene.Title":"ankyrin repeat domain 46","Gene.Symbol":"ANKRD46","Chromosomal.Location":"chr8q22.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000186106","Entrez.Gene":"157567","SwissProt":"Q6P9B7 /// Q86W74","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_940683.1","RefSeq.Transcript.ID":"NM_198401","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002110 // Ankyrin // 0.53 /// IPR002110 // Ankyrin // 1.5E-8 /// IPR002110 // Ankyrin // 4.7E-4 /// IPR002110 // Ankyrin // 0.24","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC035087(10),NM_198401(11)","Transcript.Assignments":"BC035087 // Homo sapiens ankyrin repeat domain 46, mRNA (cDNA clone IMAGE:5261039), with apparent retained intron. // gb // 10 // --- /// NM_198401 // Homo sapiens ankyrin repeat domain 46 (ANKRD46), mRNA. // refseq // 11 // --- /// ENST00000335659 // cdna:known-ccds chromosome:NCBI36:8:101602178:101641163:-1 gene:ENSG00000186106 CCDS6287.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"12116.1"}
{"Probe.Set.ID":"217749_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g11559928","Target.Description":"gb:NM_016128.1 /DEF=Homo sapiens coat protein gamma-cop (LOC51137), mRNA. /FEA=mRNA /GEN=LOC51137 /PROD=coat protein gamma-cop /DB_XREF=gi:11559928 /UG=Hs.102950 coat protein gamma-cop /FL=gb:AB047846.1 gb:NM_016128.1 gb:AF100756.1","Representative.Public.ID":"NM_016128","Archival.UniGene.Cluster":"Hs.102950","UniGene.ID":"Hs.518250","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:130451227-130479304 (+) // 99.13 // q21.3","Gene.Title":"coatomer protein complex, subunit gamma","Gene.Symbol":"COPG","Chromosomal.Location":"chr3q21.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000181789","Entrez.Gene":"22820","SwissProt":"Q54AC4 /// Q8WUI6 /// Q9Y678","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057212.1","RefSeq.Transcript.ID":"NM_016128","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 6891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 15031 // protein transport // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5795 // Golgi stack // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 30126 // COPI vesicle coat // inferred from sequence or structural similarity","Gene.Ontology.Molecular.Function":"5488 // binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002553 // Adaptin, N-terminal // 1.0E-126 /// IPR002553 // Adaptin, N-terminal // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_016128(11)","Transcript.Assignments":"NM_016128 // Homo sapiens coatomer protein complex, subunit gamma (COPG), mRNA. // refseq // 11 // --- /// ENST00000314797 // cdna:known chromosome:NCBI36:3:130451143:130479304:1 gene:ENSG00000181789 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000086635 // ensembl_est // 6 // Cross Hyb Matching Probes /// GENSCAN00000003369 // ensembl_prediction // 5 // Cross Hyb Matching Probes","_row":"17114.1"}
{"Probe.Set.ID":"218857_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13376633","Target.Description":"gb:NM_025080.1 /DEF=Homo sapiens hypothetical protein FLJ22316 (FLJ22316), mRNA. /FEA=mRNA /GEN=FLJ22316 /PROD=hypothetical protein FLJ22316 /DB_XREF=gi:13376633 /UG=Hs.7331 hypothetical protein FLJ22316 /FL=gb:NM_025080.1","Representative.Public.ID":"NM_025080","Archival.UniGene.Cluster":"Hs.7331","UniGene.ID":"Hs.535326","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:61880371-61916616 (+) // 61.38 // q12.3","Gene.Title":"asparaginase like 1","Gene.Symbol":"ASRGL1","Chromosomal.Location":"chr11q12.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000162174","Entrez.Gene":"80150","SwissProt":"Q567Q4 /// Q6P1P0 /// Q7L266 /// Q8NI34 /// Q9BRH2 /// Q9H6F7","EC":"---","OMIM":"609212","RefSeq.Protein.ID":"NP_079356.2","RefSeq.Transcript.ID":"NM_025080","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6516 // glycoprotein catabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"4067 // asparaginase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 8.6E-74 /// IPR000246 // Peptidase T2, asparaginase 2 // 1.5E-72 /// IPR000246 // Peptidase T2, asparaginase 2 // 9.2E-54","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC006267(10),NM_025080(9)","Transcript.Assignments":"ENSESTT00000097765 // --- // ensembl_est // 11 // --- /// ENSESTT00000097766 // --- // ensembl_est // 11 // --- /// ENSESTT00000097767 // --- // ensembl_est // 10 // --- /// BX640832 // Homo sapiens mRNA; cDNA DKFZp686O14209 (from clone DKFZp686O14209). // gb // 9 // --- /// AK025969 // Homo sapiens cDNA: FLJ22316 fis, clone HRC05262. // gb // 11 // --- /// BC006267 // Homo sapiens asparaginase like 1, mRNA (cDNA clone IMAGE:3952485), complete cds. // gb // 10 // --- /// NM_025080 // Homo sapiens asparaginase like 1 (ASRGL1), mRNA. // refseq // 9 // --- /// ENST00000301776 // cdna:known-ccds chromosome:NCBI36:11:61861496:61917458:1 gene:ENSG00000162174 CCDS8019.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000045872 // ensembl_prediction // 6 // Cross Hyb Matching Probes","_row":"18221"}
{"Probe.Set.ID":"201939_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5730054","Target.Description":"gb:NM_006622.1 /DEF=Homo sapiens serum-inducible kinase (SNK), mRNA. /FEA=mRNA /GEN=SNK /PROD=serum-inducible kinase /DB_XREF=gi:5730054 /UG=Hs.3838 serum-inducible kinase /FL=gb:AF059617.1 gb:NM_006622.1 gb:AF223574.1","Representative.Public.ID":"NM_006622","Archival.UniGene.Cluster":"Hs.3838","UniGene.ID":"Hs.398157","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:57785570-57791844 (-) // 99.16 // q11.2","Gene.Title":"polo-like kinase 2 (Drosophila)","Gene.Symbol":"PLK2","Chromosomal.Location":"chr5q12.1-q13.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000145632","Entrez.Gene":"10769","SwissProt":"Q8N7M6 /// Q9NYY3","EC":"---","OMIM":"607023","RefSeq.Protein.ID":"NP_006613.2","RefSeq.Transcript.ID":"NM_006622","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 43123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 4871 // signal transducer activity // inferred from mutant phenotype /// 5515 // protein binding // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"hanks // 1.9.5 // AGC group; AGC Other; DdK2 // 5.0E-76","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 2.4E-85 /// IPR000959 // POLO box duplicated region // 3.7E-31 /// IPR000959 // POLO box duplicated region // 7.7E-35","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_006622(9)","Transcript.Assignments":"NM_006622 // Homo sapiens polo-like kinase 2 (Drosophila) (PLK2), mRNA. // refseq // 9 // --- /// ENST00000381170 // cdna:known-ccds chromosome:NCBI36:5:57785566:57791844:-1 gene:ENSG00000145632 CCDS3974.1 // ensembl_transcript // 9 // --- /// ENST00000274289 // cdna:known chromosome:NCBI36:5:57785571:57791844:-1 gene:ENSG00000145632 // ensembl_transcript // 9 // ---","Annotation.Notes":"ENSESTT00000089147 // ensembl_est // 6 // Cross Hyb Matching Probes /// ENSESTT00000089149 // ensembl_est // 6 // Cross Hyb Matching Probes","_row":"1467"}
{"Probe.Set.ID":"207103_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g9789986","Target.Description":"gb:NM_012281.1 /DEF=Homo sapiens potassium voltage-gated channel, Shal-related subfamily, member 2 (KCND2), mRNA.  /FEA=mRNA /GEN=KCND2 /PROD=potassium voltage-gated channel, Shal-relatedsubfamily, member 2 /DB_XREF=gi:9789986 /UG=Hs.202687 potassium voltage-gated channel, Shal-related subfamily, member 2 /FL=gb:AF121104.1 gb:AB028967.1 gb:NM_012281.1","Representative.Public.ID":"NM_012281","Archival.UniGene.Cluster":"Hs.202687","UniGene.ID":"Hs.21703","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr7:119700957-120177623 (+) // 98.91 // q31.31","Gene.Title":"potassium voltage-gated channel, Shal-related subfamily, member 2","Gene.Symbol":"KCND2","Chromosomal.Location":"chr7q31","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"3751","SwissProt":"Q2TBD3 /// Q9NZV8","EC":"---","OMIM":"605410","RefSeq.Protein.ID":"NP_036413.1","RefSeq.Transcript.ID":"NM_012281","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1508 // regulation of action potential // traceable author statement /// 6812 // cation transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7268 // synaptic transmission // traceable author statement /// 6811 // ion transport // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"8076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 9986 // cell surface // inferred from expression pattern /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 43197 // dendritic spine // non-traceable author statement","Gene.Ontology.Molecular.Function":"5249 // voltage-gated potassium channel activity // non-traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 5515 // protein binding // non-traceable author statement /// 8270 // zinc ion binding // inferred from electronic annotation /// 30955 // potassium ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 5261 // cation channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 5515 // protein binding // inferred from electronic annotation /// 5244 // voltage-gated ion channel activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR005821 // Ion transport protein // 3.2E-44 /// IPR003131 // K+ channel tetramerisation // 5.9E-47","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_012281(11)","Transcript.Assignments":"NM_012281 // Homo sapiens potassium voltage-gated channel, Shal-related subfamily, member 2 (KCND2), mRNA. // refseq // 11 // ---","Annotation.Notes":"---","_row":"6629"}
{"Probe.Set.ID":"208064_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7705667","Target.Description":"gb:NM_015879.1 /DEF=Homo sapiens sialyltransferase 8C (alpha2,3Galbeta1,4GlcNAcalpha 2,8-sialyltransferase) (SIAT8C), mRNA.  /FEA=mRNA /GEN=SIAT8C /PROD=sialyltransferase 8C(alpha2,3Galbeta1,4GlcNAcalpha 2,8-sialyltransferase) /DB_XREF=gi:7705667 /UG=Hs.114316 sialyltransferase 8C (alpha2,3Galbeta1,4GlcNAcalpha 2,8-sialyltransferase) /FL=gb:AF004668.2 gb:NM_015879.1","Representative.Public.ID":"NM_015879","Archival.UniGene.Cluster":"Hs.114316","UniGene.ID":"Hs.23172","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr18:53169041-53178833 (+) // 94.27 // q21.31","Gene.Title":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3","Gene.Symbol":"ST8SIA3","Chromosomal.Location":"chr18q21.31","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000177511","Entrez.Gene":"51046","SwissProt":"O43173 /// Q59GW3 /// Q6B085","EC":"EC:2.4.99.-","OMIM":"609478","RefSeq.Protein.ID":"NP_056963.1","RefSeq.Transcript.ID":"NM_015879","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6486 // protein amino acid glycosylation // inferred from electronic annotation /// 6491 // N-glycan processing // traceable author statement /// 6688 // glycosphingolipid biosynthesis // traceable author statement /// 9311 // oligosaccharide metabolism // traceable author statement","Gene.Ontology.Cellular.Component":"5795 // Golgi stack // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 30173 // integral to Golgi membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"8373 // sialyltransferase activity // traceable author statement /// 8373 // sialyltransferase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 16757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001675 // Glycosyl transferase, family 29 // 4.4E-36 /// IPR001675 // Glycosyl transferase, family 29 // 2.4E-31 /// IPR001675 // Glycosyl transferase, family 29 // 4.4E-36 /// IPR003671 // Spindlin/spermiogenesis-specific protein // 1.8E-26 /// IPR003671 // Spindlin/spermiogenesis-specific protein // 9.3E-28 /// IPR003671 // Spindlin/spermiogenesis-specific protein // 7.5E-22","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AB208996(11),NM_015879(11)","Transcript.Assignments":"AB208996 // Homo sapiens mRNA for ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 variant protein. // gb // 11 // --- /// NM_015879 // Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (ST8SIA3), mRNA. // refseq // 11 // --- /// GENSCAN00000037364 // cdna:Genscan chromosome:NCBI36:18:53171091:53178506:1 // ensembl_prediction // 10 // --- /// ENST00000324000 // cdna:known chromosome:NCBI36:18:53169042:53178833:1 gene:ENSG00000177511 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"7573"}
{"Probe.Set.ID":"208065_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g7705667","Target.Description":"gb:NM_015879.1 /DEF=Homo sapiens sialyltransferase 8C (alpha2,3Galbeta1,4GlcNAcalpha 2,8-sialyltransferase) (SIAT8C), mRNA.  /FEA=mRNA /GEN=SIAT8C /PROD=sialyltransferase 8C(alpha2,3Galbeta1,4GlcNAcalpha 2,8-sialyltransferase) /DB_XREF=gi:7705667 /UG=Hs.114316 sialyltransferase 8C (alpha2,3Galbeta1,4GlcNAcalpha 2,8-sialyltransferase) /FL=gb:AF004668.2 gb:NM_015879.1","Representative.Public.ID":"NM_015879","Archival.UniGene.Cluster":"Hs.114316","UniGene.ID":"Hs.23172","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr18:53169041-53178833 (+) // 94.27 // q21.31","Gene.Title":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3","Gene.Symbol":"ST8SIA3","Chromosomal.Location":"chr18q21.31","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000177511","Entrez.Gene":"51046","SwissProt":"O43173 /// Q59GW3 /// Q6B085","EC":"EC:2.4.99.-","OMIM":"609478","RefSeq.Protein.ID":"NP_056963.1","RefSeq.Transcript.ID":"NM_015879","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6486 // protein amino acid glycosylation // inferred from electronic annotation /// 6491 // N-glycan processing // traceable author statement /// 6688 // glycosphingolipid biosynthesis // traceable author statement /// 9311 // oligosaccharide metabolism // traceable author statement","Gene.Ontology.Cellular.Component":"5795 // Golgi stack // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 30173 // integral to Golgi membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"8373 // sialyltransferase activity // traceable author statement /// 8373 // sialyltransferase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 16757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001675 // Glycosyl transferase, family 29 // 4.4E-36 /// IPR001675 // Glycosyl transferase, family 29 // 2.4E-31 /// IPR001675 // Glycosyl transferase, family 29 // 4.4E-36","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AB208996(11),NM_015879(11)","Transcript.Assignments":"AB208996 // Homo sapiens mRNA for ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 variant protein. // gb // 11 // --- /// NM_015879 // Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (ST8SIA3), mRNA. // refseq // 11 // --- /// ENST00000324000 // cdna:known chromosome:NCBI36:18:53169042:53178833:1 gene:ENSG00000177511 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"7574"}
{"Probe.Set.ID":"204632_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4506734","Target.Description":"gb:NM_003942.1 /DEF=Homo sapiens ribosomal protein S6 kinase, 90kD, polypeptide 4 (RPS6KA4), mRNA.  /FEA=mRNA /GEN=RPS6KA4 /PROD=ribosomal protein S6 kinase, 90kD, polypeptide4 /DB_XREF=gi:4506734 /UG=Hs.105584 ribosomal protein S6 kinase, 90kD, polypeptide 4 /FL=gb:NM_003942.1","Representative.Public.ID":"NM_003942","Archival.UniGene.Cluster":"Hs.105584","UniGene.ID":"Hs.105584","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:63883218-63896262 (+) // 97.96 // q13.1","Gene.Title":"ribosomal protein S6 kinase, 90kDa, polypeptide 4","Gene.Symbol":"RPS6KA4","Chromosomal.Location":"chr11q11-q13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000162302","Entrez.Gene":"8986","SwissProt":"O75676 /// Q86VU2","EC":"EC:2.7.1.37","OMIM":"603606","RefSeq.Protein.ID":"NP_001006945.1 /// NP_003933.1","RefSeq.Transcript.ID":"NM_001006944 /// NM_003942","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 6468 // protein amino acid phosphorylation // inferred from direct assay /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 6468 // protein amino acid phosphorylation // inferred from sequence or structural similarity /// 7243 // protein kinase cascade // inferred from direct assay","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from direct assay /// 5634 // nucleus // inferred from expression pattern /// 5634 // nucleus // inferred from sequence or structural similarity /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 4711 // ribosomal protein S6 kinase activity // inferred from sequence or structural similarity /// 4711 // ribosomal protein S6 kinase activity // non-traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from direct assay /// 5524 // ATP binding // inferred from electronic annotation /// 5524 // ATP binding // inferred from sequence or structural similarity /// 16740 // transferase activity // inferred from electronic annotation /// 48273 // mitogen-activated protein kinase p38 binding // inferred from genetic interaction /// 48273 // mitogen-activated protein kinase p38 binding // inferred from sequence or structural similarity /// 4674 // protein serine/threonine kinase activity // inferred from direct assay /// 4672 // protein kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"hanks // 1.6.1 // AGC group; AGC VI phosphorylate ribosomal protein S6; S6K // 1.0E-87","Protein.Domains":"---","InterPro":"--- // --- // 3.6E-88 /// --- // --- // 5.3E-80 /// --- // --- // 2.6E-13 /// --- // --- // 5.1E-7 /// IPR000719 // Protein kinase // 3.6E-88 /// IPR000719 // Protein kinase // 5.3E-80 /// IPR000961 // Protein kinase C-terminal domain // 2.6E-13 /// IPR000719 // Protein kinase // 5.3E-80","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001006944(11),NM_003942(11)","Transcript.Assignments":"NM_001006944 // Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 4 (RPS6KA4), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_003942 // Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 4 (RPS6KA4), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000334205 // cdna:known-ccds chromosome:NCBI36:11:63883201:63896262:1 gene:ENSG00000162302 CCDS8073.1 // ensembl_transcript // 11 // --- /// ENST00000294261 // cdna:known chromosome:NCBI36:11:63883219:63896263:1 gene:ENSG00000162302 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4159"}
{"Probe.Set.ID":"204901_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.226434.0","Target.Description":"Consensus includes gb:AA824369 /FEA=EST /DB_XREF=gi:2896253 /DB_XREF=est:aj29a05.s1 /CLONE=1391696 /UG=Hs.226434 beta-transducin repeat containing /FL=gb:NM_003939.1 gb:AF129530.1","Representative.Public.ID":"AA824369","Archival.UniGene.Cluster":"Hs.226434","UniGene.ID":"Hs.500812","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:103103858-103304616 (+) // 99.09 // q24.32","Gene.Title":"beta-transducin repeat containing","Gene.Symbol":"BTRC","Chromosomal.Location":"chr10q24.32","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000166167","Entrez.Gene":"8945","SwissProt":"Q68DS0 /// Q86WI4 /// Q86WI5 /// Q9Y297","EC":"---","OMIM":"603482","RefSeq.Protein.ID":"NP_003930.1 /// NP_378663.1","RefSeq.Transcript.ID":"NM_003939 /// NM_033637","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6511 // ubiquitin-dependent protein catabolism // traceable author statement /// 6512 // ubiquitin cycle // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 16055 // Wnt receptor signaling pathway // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5783 // endoplasmic reticulum // not recorded","Gene.Ontology.Molecular.Function":"4840 // ubiquitin conjugating enzyme activity // traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 16874 // ligase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.8E-8 /// --- // --- // 9.3E-6 /// --- // --- // 3.7E-12 /// --- // --- // 1.7E-6 /// --- // --- // 3.6E-10 /// --- // --- // 1.5E-9 /// --- // --- // 1.7E-11 /// --- // --- // 1.7E-7 /// --- // --- // 2.8E-8 /// --- // --- // 9.3E-6 /// --- // --- // 3.7E-12 /// --- // --- // 1.7E-6 /// --- // --- // 3.6E-10 /// --- // --- // 1.5E-9 /// --- // --- // 1.7E-11 /// --- // --- // 1.7E-7 /// IPR001810 // Cyclin-like F-box // 2.8E-8 /// IPR001680 // G-protein beta WD-40 repeat // 9.3E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.7E-12 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.6E-10 /// IPR001680 // G-protein beta WD-40 repeat // 1.5E-9 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-11 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-7 /// IPR001810 // Cyclin-like F-box // 2.8E-8 /// IPR001680 // G-protein beta WD-40 repeat // 9.3E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.7E-12 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.6E-10 /// IPR001680 // G-protein beta WD-40 repeat // 1.5E-9 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-11 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-7","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003939(11),NM_033637(11)","Transcript.Assignments":"NM_003939 // Homo sapiens beta-transducin repeat containing (BTRC), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_033637 // Homo sapiens beta-transducin repeat containing (BTRC), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000370187 // cdna:known-ccds chromosome:NCBI36:10:103103810:103307068:1 gene:ENSG00000166167 CCDS7512.1 // ensembl_transcript // 11 // --- /// ENST00000346492 // cdna:known chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 // ensembl_transcript // 11 // --- /// ENST00000370183 // cdna:known chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 // ensembl_transcript // 11 // --- /// ENST00000354827 // cdna:known-ccds chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 CCDS7511.1 // ensembl_transcript // 11 // --- /// ENST00000370182 // cdna:known chromosome:NCBI36:10:103103854:103307068:1 gene:ENSG00000166167 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4428"}
{"Probe.Set.ID":"216091_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.226434.1","Target.Description":"Consensus includes gb:AF101784.1 /DEF=Homo sapiens b-TRCP variant E3RS-IkappaB mRNA, partial cds. /FEA=mRNA /PROD=b-TRCP variant E3RS-IkappaB /DB_XREF=gi:4165135 /UG=Hs.226434 beta-transducin repeat containing","Representative.Public.ID":"AF101784","Archival.UniGene.Cluster":"Hs.226434","UniGene.ID":"Hs.500812","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:103180086-103300607 (+) // 93.57 // q24.32","Gene.Title":"beta-transducin repeat containing","Gene.Symbol":"BTRC","Chromosomal.Location":"chr10q24.32","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000166167","Entrez.Gene":"8945","SwissProt":"Q68DS0 /// Q86WI4 /// Q86WI5 /// Q9Y297","EC":"---","OMIM":"603482","RefSeq.Protein.ID":"NP_003930.1 /// NP_378663.1","RefSeq.Transcript.ID":"NM_003939 /// NM_033637","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6511 // ubiquitin-dependent protein catabolism // traceable author statement /// 6512 // ubiquitin cycle // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 16055 // Wnt receptor signaling pathway // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5783 // endoplasmic reticulum // not recorded","Gene.Ontology.Molecular.Function":"4840 // ubiquitin conjugating enzyme activity // traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 16874 // ligase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.8E-8 /// --- // --- // 9.3E-6 /// --- // --- // 3.7E-12 /// --- // --- // 1.7E-6 /// --- // --- // 3.6E-10 /// --- // --- // 1.5E-9 /// --- // --- // 1.7E-11 /// --- // --- // 1.7E-7 /// --- // --- // 2.8E-8 /// --- // --- // 9.3E-6 /// --- // --- // 3.7E-12 /// --- // --- // 1.7E-6 /// --- // --- // 3.6E-10 /// --- // --- // 1.5E-9 /// --- // --- // 1.7E-11 /// --- // --- // 1.7E-7 /// IPR001810 // Cyclin-like F-box // 2.8E-8 /// IPR001680 // G-protein beta WD-40 repeat // 9.3E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.7E-12 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.6E-10 /// IPR001680 // G-protein beta WD-40 repeat // 1.5E-9 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-11 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-7 /// IPR001810 // Cyclin-like F-box // 2.8E-8 /// IPR001680 // G-protein beta WD-40 repeat // 9.3E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.7E-12 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.6E-10 /// IPR001680 // G-protein beta WD-40 repeat // 1.5E-9 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-11 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-7","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC027994(11),NM_003939(11),NM_033637(11)","Transcript.Assignments":"ENSESTT00000055885 // --- // ensembl_est // 11 // --- /// BC027994 // Homo sapiens beta-transducin repeat containing, mRNA (cDNA clone MGC:40028 IMAGE:5180993), complete cds. // gb // 11 // --- /// NM_003939 // Homo sapiens beta-transducin repeat containing (BTRC), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_033637 // Homo sapiens beta-transducin repeat containing (BTRC), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000370187 // cdna:known-ccds chromosome:NCBI36:10:103103810:103307068:1 gene:ENSG00000166167 CCDS7512.1 // ensembl_transcript // 11 // --- /// ENST00000346492 // cdna:known chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 // ensembl_transcript // 11 // --- /// ENST00000370183 // cdna:known chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 // ensembl_transcript // 11 // --- /// ENST00000354827 // cdna:known-ccds chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 CCDS7511.1 // ensembl_transcript // 11 // --- /// ENST00000370182 // cdna:known chromosome:NCBI36:10:103103854:103307068:1 gene:ENSG00000166167 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000055884 // ensembl_est // 2 // Cross Hyb Matching Probes","_row":"15463"}
{"Probe.Set.ID":"222374_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.170212.0","Target.Description":"Consensus includes gb:AI186064 /FEA=EST /DB_XREF=gi:3736702 /DB_XREF=est:qe50h05.x1 /CLONE=IMAGE:1742457 /UG=Hs.170212 ESTs, Highly similar to b-TRCP variant E3RS-IkappaB H.sapiens","Representative.Public.ID":"AI186064","Archival.UniGene.Cluster":"Hs.170212","UniGene.ID":"Hs.500812","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:103300526-103300937 (+) // 99.76 // q24.32","Gene.Title":"beta-transducin repeat containing","Gene.Symbol":"BTRC","Chromosomal.Location":"chr10q24.32","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000166167","Entrez.Gene":"8945","SwissProt":"Q68DS0 /// Q86WI4 /// Q86WI5 /// Q9Y297","EC":"---","OMIM":"603482","RefSeq.Protein.ID":"NP_003930.1 /// NP_378663.1","RefSeq.Transcript.ID":"NM_003939 /// NM_033637","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6511 // ubiquitin-dependent protein catabolism // traceable author statement /// 6512 // ubiquitin cycle // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 16055 // Wnt receptor signaling pathway // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5783 // endoplasmic reticulum // not recorded","Gene.Ontology.Molecular.Function":"4840 // ubiquitin conjugating enzyme activity // traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 16874 // ligase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.8E-8 /// --- // --- // 9.3E-6 /// --- // --- // 3.7E-12 /// --- // --- // 1.7E-6 /// --- // --- // 3.6E-10 /// --- // --- // 1.5E-9 /// --- // --- // 1.7E-11 /// --- // --- // 1.7E-7 /// --- // --- // 2.8E-8 /// --- // --- // 9.3E-6 /// --- // --- // 3.7E-12 /// --- // --- // 1.7E-6 /// --- // --- // 3.6E-10 /// --- // --- // 1.5E-9 /// --- // --- // 1.7E-11 /// --- // --- // 1.7E-7 /// IPR001810 // Cyclin-like F-box // 2.8E-8 /// IPR001680 // G-protein beta WD-40 repeat // 9.3E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.7E-12 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.6E-10 /// IPR001680 // G-protein beta WD-40 repeat // 1.5E-9 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-11 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-7 /// IPR001810 // Cyclin-like F-box // 2.8E-8 /// IPR001680 // G-protein beta WD-40 repeat // 9.3E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.7E-12 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-6 /// IPR001680 // G-protein beta WD-40 repeat // 3.6E-10 /// IPR001680 // G-protein beta WD-40 repeat // 1.5E-9 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-11 /// IPR001680 // G-protein beta WD-40 repeat // 1.7E-7","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Genome Target Overlap based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Genome Target Overlap // B","Annotation.Transcript.Cluster":"BC027994,NM_003939,NM_033637","Transcript.Assignments":"ENSESTT00000055885 // --- // ensembl_est // 0 // chr10:103284404-103303431(+) /// NM_033637 // Homo sapiens beta-transducin repeat containing (BTRC), transcript variant 1, mRNA. // refseq // 0 // chr10:103103814-103307058(+) /// ENST00000346492 // cdna:known chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 // ensembl_transcript // 0 // chr10:103103814-103307058(+) /// ENST00000370183 // cdna:known chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 // ensembl_transcript // 0 // chr10:103103814-103307058(+) /// ENST00000370187 // cdna:known-ccds chromosome:NCBI36:10:103103810:103307068:1 gene:ENSG00000166167 CCDS7512.1 // ensembl_transcript // 0 // chr10:103103809-103307068(+) /// ENST00000370182 // cdna:known chromosome:NCBI36:10:103103854:103307068:1 gene:ENSG00000166167 // ensembl_transcript // 0 // chr10:103103853-103307068(+) /// ENST00000354827 // cdna:known-ccds chromosome:NCBI36:10:103103815:103307058:1 gene:ENSG00000166167 CCDS7511.1 // ensembl_transcript // 0 // chr10:103103814-103307058(+) /// NM_003939 // Homo sapiens beta-transducin repeat containing (BTRC), transcript variant 2, mRNA. // refseq // 0 // chr10:103103814-103307058(+) /// BC027994 // Homo sapiens beta-transducin repeat containing, mRNA (cDNA clone MGC:40028 IMAGE:5180993), complete cds. // gb // 0 // chr10:103103890-103303232(+)","Annotation.Notes":"---","_row":"21733"}
{"Probe.Set.ID":"208345_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4505960","Target.Description":"gb:NM_002699.1 /DEF=Homo sapiens POU domain, class 3, transcription factor 1 (POU3F1), mRNA.  /FEA=mRNA /GEN=POU3F1 /PROD=POU domain, class 3, transcription factor 1 /DB_XREF=gi:4505960 /UG=Hs.1837 POU domain, class 3, transcription factor 1 /FL=gb:NM_002699.1","Representative.Public.ID":"NM_002699","Archival.UniGene.Cluster":"Hs.1837","UniGene.ID":"Hs.1837","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:38283489-38284893 (-) // 66.24 // p34.3","Gene.Title":"POU domain, class 3, transcription factor 1","Gene.Symbol":"POU3F1","Chromosomal.Location":"chr1p34.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000185668","Entrez.Gene":"5453","SwissProt":"Q03052 /// Q16423","EC":"---","OMIM":"602479","RefSeq.Protein.ID":"NP_002690.2","RefSeq.Transcript.ID":"NM_002699","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 8366 // nerve ensheathment // traceable author statement /// 6350 // transcription // inferred from electronic annotation /// 45449 // regulation of transcription // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement /// 43565 // sequence-specific DNA binding // inferred from electronic annotation /// 3677 // DNA binding // inferred from electronic annotation /// 3700 // transcription factor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"scop // a.4.1.Homeodomain // All alpha proteins; DNA/RNA-binding 3-helical bundle; Homeodomain-like; Homeodomain // 4.00000007816593E-25","InterPro":"IPR001356 // Homeobox // 3.1E-23 /// IPR000327 // POU domain // 9.7E-54 /// IPR001356 // Homeobox // 3.1E-23 /// IPR000327 // POU domain // 9.7E-54 /// IPR001356 // Homeobox // 3.1E-23 /// IPR000327 // POU domain // 9.7E-54","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002699(11)","Transcript.Assignments":"Z18284 // Homo sapiens Oct-6 transcription factor. // gb // 11 // --- /// NM_002699 // Homo sapiens POU domain, class 3, transcription factor 1 (POU3F1), mRNA. // refseq // 11 // --- /// GENSCAN00000025415 // cdna:Genscan chromosome:NCBI36:1:38283647:38285002:-1 // ensembl_prediction // 9 // --- /// ENST00000373012 // cdna:known chromosome:NCBI36:1:38282086:38285053:-1 gene:ENSG00000185668 // ensembl_transcript // 11 // --- /// ENST00000328583 // cdna:known chromosome:NCBI36:1:38283647:38285002:-1 gene:ENSG00000185668 // ensembl_transcript // 9 // ---","Annotation.Notes":"CR611990 // gb // 2 // Cross Hyb Matching Probes /// BC078673 // gb // 11 // Negative Strand Matching Probes","_row":"7848"}
{"Probe.Set.ID":"210475_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g508989","Target.Description":"gb:L26494.1 /DEF=Homo sapiens (oct-6) mRNA, complete cds. /FEA=mRNA /GEN=oct-6 /DB_XREF=gi:508989 /UG=Hs.1837 POU domain, class 3, transcription factor 1 /FL=gb:L26494.1","Representative.Public.ID":"L26494","Archival.UniGene.Cluster":"Hs.1837","UniGene.ID":"Hs.1837","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:38282864-38285038 (-) // 84.47 // p34.3","Gene.Title":"POU domain, class 3, transcription factor 1","Gene.Symbol":"POU3F1","Chromosomal.Location":"chr1p34.1","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"5453","SwissProt":"Q03052 /// Q16423","EC":"---","OMIM":"602479","RefSeq.Protein.ID":"NP_002690.2","RefSeq.Transcript.ID":"NM_002699","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 8366 // nerve ensheathment // traceable author statement /// 6350 // transcription // inferred from electronic annotation /// 45449 // regulation of transcription // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement /// 43565 // sequence-specific DNA binding // inferred from electronic annotation /// 3677 // DNA binding // inferred from electronic annotation /// 3700 // transcription factor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"scop // a.4.1.Homeodomain // All alpha proteins; DNA/RNA-binding 3-helical bundle; Homeodomain-like; Homeodomain // 4.00000007816593E-25","InterPro":"IPR001356 // Homeobox // 3.1E-23 /// IPR000327 // POU domain // 9.7E-54","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002699(11)","Transcript.Assignments":"NM_002699 // Homo sapiens POU domain, class 3, transcription factor 1 (POU3F1), mRNA. // refseq // 11 // ---","Annotation.Notes":"CR611990 // gb // 8 // Cross Hyb Matching Probes /// ENST00000373012 // ensembl_transcript // 8 // Cross Hyb Matching Probes /// BC078673 // gb // 9 // Negative Strand Matching Probes","_row":"9952"}
{"Probe.Set.ID":"210198_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12803660","Target.Description":"gb:BC002665.1 /DEF=Homo sapiens, proteolipid protein (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated), clone MGC:3940, mRNA, complete cds.  /FEA=mRNA /PROD=proteolipid protein (Pelizaeus-Merzbacherdisease, spastic paraplegia 2, uncomplicated) /DB_XREF=gi:12803660 /UG=Hs.1787 proteolipid protein (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated) /FL=gb:BC002665.1 gb:M17085.1","Representative.Public.ID":"BC002665","Archival.UniGene.Cluster":"Hs.1787","UniGene.ID":"Hs.1787","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:102918433-102933704 (+) // 99.17 // q22.2","Gene.Title":"proteolipid protein 1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated)","Gene.Symbol":"PLP1","Chromosomal.Location":"chrXq22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000123560","Entrez.Gene":"5354","SwissProt":"P60201 /// Q5U0F2 /// Q5U0F3 /// Q6FHZ6","EC":"---","OMIM":"300401 /// 312080 /// 312920","RefSeq.Protein.ID":"NP_000524.3 /// NP_955772.1","RefSeq.Transcript.ID":"NM_000533 /// NM_199478","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5198 // structural molecule activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001614 // Myelin proteolipid protein PLP // 1.0E-126 /// IPR001614 // Myelin proteolipid protein PLP // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000533(11),NM_199478(11)","Transcript.Assignments":"NM_000533 // Homo sapiens proteolipid protein 1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated) (PLP1), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_199478 // Homo sapiens proteolipid protein 1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated) (PLP1), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000303958 // cdna:known-ccds chromosome:NCBI36:X:102918410:102934201:1 gene:ENSG00000123560 CCDS14513.1 // ensembl_transcript // 11 // --- /// ENST00000361621 // cdna:known-ccds chromosome:NCBI36:X:102918410:102934201:1 gene:ENSG00000123560 CCDS14514.1 // ensembl_transcript // 11 // --- /// ENST00000372608 // cdna:known chromosome:NCBI36:X:102918434:102934204:1 gene:ENSG00000123560 // ensembl_transcript // 11 // --- /// ENST00000372606 // cdna:known chromosome:NCBI36:X:102918434:102934204:1 gene:ENSG00000123560 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9682"}
{"Probe.Set.ID":"203509_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6325473","Target.Description":"gb:NM_003105.2 /DEF=Homo sapiens sortilin-related receptor, L(DLR class) A repeats-containing (SORL1), mRNA.  /FEA=mRNA /GEN=SORL1 /PROD=sortilin-related receptor, L(DLR class) Arepeats-containing /DB_XREF=gi:6325473 /UG=Hs.278571 sortilin-related receptor, L(DLR class) A repeats-containing /FL=gb:U60975.2 gb:NM_003105.2","Representative.Public.ID":"NM_003105","Archival.UniGene.Cluster":"Hs.278571","UniGene.ID":"Hs.368592","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:120828179-121005603 (+) // 97.74 // q24.1","Gene.Title":"sortilin-related receptor, L(DLR class) A repeats-containing","Gene.Symbol":"SORL1","Chromosomal.Location":"chr11q23.2-q24.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000137642","Entrez.Gene":"6653","SwissProt":"Q92673","EC":"---","OMIM":"602005","RefSeq.Protein.ID":"NP_003096.1","RefSeq.Transcript.ID":"NM_003105","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6629 // lipid metabolism // inferred from electronic annotation /// 6869 // lipid transport // inferred from electronic annotation /// 6886 // intracellular protein transport // inferred from electronic annotation /// 6898 // receptor mediated endocytosis // traceable author statement /// 8202 // steroid metabolism // inferred from electronic annotation /// 8203 // cholesterol metabolism // inferred from electronic annotation /// 6810 // transport // inferred from electronic annotation /// 6897 // endocytosis // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4888 // transmembrane receptor activity // traceable author statement /// 5319 // lipid transporter activity // inferred from electronic annotation /// 8565 // protein transporter activity // inferred from electronic annotation /// 4872 // receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 8.0E-8 /// --- // --- // 3.6E-9 /// --- // --- // 3.6E-5 /// --- // --- // 3.5E-9 /// --- // --- // 4.7E-12 /// --- // --- // 4.6E-5 /// --- // --- // 3.7E-14 /// --- // --- // 8.2E-12 /// --- // --- // 7.5E-18 /// --- // --- // 3.2E-20 /// --- // --- // 8.2E-16 /// --- // --- // 1.4E-4 /// --- // --- // 1.5E-16 /// --- // --- // 4.0E-16 /// --- // --- // 6.4E-17 /// --- // --- // 1.9E-11 /// --- // --- // 4.0E-12 /// --- // --- // 0.08 /// --- // --- // 0.029 /// --- // --- // 1.7 /// --- // --- // 16.0 /// --- // --- // 0.0094 /// IPR000033 // Low-density lipoprotein receptor, YWTD repeat // 8.0E-8 /// IPR000033 // Low-density lipoprotein receptor, YWTD repeat // 3.6E-9 /// IPR000033 // Low-density lipoprotein receptor, YWTD repeat // 3.6E-5 /// IPR003961 // Fibronectin, type III // 3.5E-9 /// IPR003961 // Fibronectin, type III // 4.7E-12 /// IPR003961 // Fibronectin, type III // 5.3E-5 /// IPR002172 // Low density lipoprotein-receptor, class A // 3.7E-14 /// IPR002172 // Low density lipoprotein-receptor, class A // 8.2E-12 /// IPR002172 // Low density lipoprotein-receptor, class A // 7.5E-18 /// IPR002172 // Low density lipoprotein-receptor, class A // 3.2E-20 /// IPR002172 // Low density lipoprotein-receptor, class A // 8.2E-16 /// IPR002172 // Low density lipoprotein-receptor, class A // 1.4E-4 /// IPR002172 // Low density lipoprotein-receptor, class A // 1.5E-16 /// IPR002172 // Low density lipoprotein-receptor, class A // 4.0E-16 /// IPR002172 // Low density lipoprotein-receptor, class A // 6.4E-17 /// IPR002172 // Low density lipoprotein-receptor, class A // 1.9E-11 /// IPR002172 // Low density lipoprotein-receptor, class A // 4.0E-12 /// IPR002860 // Glycosyl hydrolase, BNR repeat // 0.08 /// IPR002860 // Glycosyl hydrolase, BNR repeat // 0.029 /// IPR002860 // Glycosyl hydrolase, BNR repeat // 1.7 /// IPR002860 // Glycosyl hydrolase, BNR repeat // 16.0 /// IPR002860 // Glycosyl hydrolase, BNR repeat // 0.0094","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003105(11)","Transcript.Assignments":"ENSESTT00000081809 // --- // ensembl_est // 11 // --- /// NM_003105 // Homo sapiens sortilin-related receptor, L(DLR class) A repeats-containing (SORL1), mRNA. // refseq // 11 // --- /// GENSCAN00000049919 // cdna:Genscan chromosome:NCBI36:11:121001004:121005482:1 // ensembl_prediction // 9 // --- /// ENST00000260197 // cdna:known-ccds chromosome:NCBI36:11:120828159:121005597:1 gene:ENSG00000137642 CCDS8436.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"BC040643 // gb // 3 // Cross Hyb Matching Probes","_row":"3036"}
{"Probe.Set.ID":"205454_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12804696","Target.Description":"gb:BC001777.1 /DEF=Homo sapiens, hippocalcin, clone MGC:1822, mRNA, complete cds. /FEA=mRNA /PROD=hippocalcin /DB_XREF=gi:12804696 /UG=Hs.288654 hippocalcin /FL=gb:BC001777.1 gb:NM_002143.1 gb:D16593.1","Representative.Public.ID":"BC001777","Archival.UniGene.Cluster":"Hs.288654","UniGene.ID":"Hs.632391","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:33127064-33132833 (+) // 96.32 // p35.1","Gene.Title":"hippocalcin","Gene.Symbol":"HPCA","Chromosomal.Location":"chr1p35-p34.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000121905","Entrez.Gene":"3208","SwissProt":"P84074 /// Q5U068","EC":"---","OMIM":"142622","RefSeq.Protein.ID":"NP_002134.2","RefSeq.Transcript.ID":"NM_002143","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"3779 // actin binding // inferred from direct assay /// 5509 // calcium ion binding // non-traceable author statement /// 5509 // calcium ion binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002048 // Calcium-binding EF-hand // 4.0E-6 /// IPR002048 // Calcium-binding EF-hand // 7.9E-8 /// IPR002048 // Calcium-binding EF-hand // 2.9E-7","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002143(11)","Transcript.Assignments":"ENSESTT00000087320 // --- // ensembl_est // 11 // --- /// NM_002143 // Homo sapiens hippocalcin (HPCA), mRNA. // refseq // 11 // --- /// ENST00000373467 // cdna:known-ccds chromosome:NCBI36:1:33124623:33132834:1 gene:ENSG00000121905 CCDS370.1 // ensembl_transcript // 11 // --- /// ENST00000241313 // cdna:known chromosome:NCBI36:1:33124685:33132833:1 gene:ENSG00000121905 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4981"}
{"Probe.Set.ID":"207659_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5729930","Target.Description":"gb:NM_006501.1 /DEF=Homo sapiens myelin-associated oligodendrocyte basic protein (MOBP), mRNA.  /FEA=mRNA /GEN=MOBP /PROD=myelin-associated oligodendrocyte basic protein /DB_XREF=gi:5729930 /UG=Hs.169309 myelin-associated oligodendrocyte basic protein /FL=gb:NM_006501.1 gb:D28113.1","Representative.Public.ID":"NM_006501","Archival.UniGene.Cluster":"Hs.169309","UniGene.ID":"Hs.121333","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:39518557-39530101 (+) // 67.21 // p22.1","Gene.Title":"myelin-associated oligodendrocyte basic protein","Gene.Symbol":"MOBP","Chromosomal.Location":"chr3p22.1","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"4336","SwissProt":"Q13874 /// Q13875 /// Q6DHZ6 /// Q6ZVC3 /// Q8TBJ1","EC":"---","OMIM":"600948","RefSeq.Protein.ID":"NP_006492.1 /// NP_891979.1 /// NP_891980.1","RefSeq.Transcript.ID":"NM_006501 /// NM_182934 /// NM_182935","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7399 // nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5625 // soluble fraction // traceable author statement","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006788 // Myelin-associated oligodendrocytic basic protein (MOBP) // 5.0E-67","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_006501(11),NM_182934(11),NM_182935(10)","Transcript.Assignments":"NM_006501 // Homo sapiens myelin-associated oligodendrocyte basic protein (MOBP), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_182935 // Homo sapiens myelin-associated oligodendrocyte basic protein (MOBP), transcript variant 3, mRNA. // refseq // 10 // --- /// NM_182934 // Homo sapiens myelin-associated oligodendrocyte basic protein (MOBP), transcript variant 1, mRNA. // refseq // 11 // ---","Annotation.Notes":"ENSESTT00000063428 // ensembl_est // 2 // Cross Hyb Matching Probes /// AK095180 // gb // 5 // Cross Hyb Matching Probes /// AK124766 // gb // 6 // Cross Hyb Matching Probes /// AK127034 // gb // 6 // Cross Hyb Matching Probes /// BC075796 // gb // 6 // Cross Hyb Matching Probes /// ENST00000383754 // ensembl_transcript // 6 // Cross Hyb Matching Probes /// ENST00000311042 // ensembl_transcript // 6 // Cross Hyb Matching Probes","_row":"7180"}
{"Probe.Set.ID":"210193_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g662277","Target.Description":"gb:D28114.1 /DEF=Human mRNA for MOBP (myelin-associated oligodendrocytic basic protein), complete cds, clone hOPRP2.  /FEA=mRNA /PROD=MOBP /DB_XREF=gi:662277 /UG=Hs.169309 myelin-associated oligodendrocyte basic protein /FL=gb:D28114.1","Representative.Public.ID":"D28114","Archival.UniGene.Cluster":"Hs.169309","UniGene.ID":"Hs.121333","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:39518557-39530101 (+) // 45.86 // p22.1","Gene.Title":"myelin-associated oligodendrocyte basic protein","Gene.Symbol":"MOBP","Chromosomal.Location":"chr3p22.1","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"4336","SwissProt":"Q13874 /// Q13875 /// Q6DHZ6 /// Q6ZVC3 /// Q8TBJ1","EC":"---","OMIM":"600948","RefSeq.Protein.ID":"NP_006492.1 /// NP_891979.1 /// NP_891980.1","RefSeq.Transcript.ID":"NM_006501 /// NM_182934 /// NM_182935","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7399 // nervous system development // traceable author statement","Gene.Ontology.Cellular.Component":"5625 // soluble fraction // traceable author statement","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006788 // Myelin-associated oligodendrocytic basic protein (MOBP) // 5.0E-67","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_182934(11)","Transcript.Assignments":"NM_182934 // Homo sapiens myelin-associated oligodendrocyte basic protein (MOBP), transcript variant 1, mRNA. // refseq // 11 // ---","Annotation.Notes":"AK095180 // gb // 6 // Cross Hyb Matching Probes /// NM_182935 // refseq // 6 // Cross Hyb Matching Probes","_row":"9677"}
{"Probe.Set.ID":"210038_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.211593.0","Target.Description":"Consensus includes gb:AL137145 /DEF=Human DNA sequence from clone RP11-563J2 on chromosome 10 Contains ESTs, STSs, GSSs and a CpG island. Contains a novel pseudogene and the 3 part of the PRKCQ gene for protein kinase C theta /FEA=mRNA /DB_XREF=gi:9581557 /UG=Hs.211593 protein kinase C, theta /FL=gb:L07032.1 gb:NM_006257.1 gb:L01087.1","Representative.Public.ID":"AL137145","Archival.UniGene.Cluster":"Hs.211593","UniGene.ID":"Hs.498570","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:6509110-6662269 (-) // 98.27 // p15.1","Gene.Title":"protein kinase C, theta","Gene.Symbol":"PRKCQ","Chromosomal.Location":"chr10p15","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000065675","Entrez.Gene":"5588","SwissProt":"Q04759 /// Q8N218","EC":"EC:2.7.1.37 /// EC:2.7.1.-","OMIM":"600448","RefSeq.Protein.ID":"NP_006248.1","RefSeq.Transcript.ID":"NM_006257","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1558 // regulation of cell growth // non-traceable author statement /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 6468 // protein amino acid phosphorylation // non-traceable author statement /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 7242 // intracellular signaling cascade // non-traceable author statement /// 51092 // activation of NF-kappaB transcription factor // inferred from direct assay","Gene.Ontology.Cellular.Component":"5622 // intracellular // non-traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // non-traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from electronic annotation /// 5524 // ATP binding // non-traceable author statement /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4713 // protein-tyrosine kinase activity // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"hanks // 1.2.8 // AGC group; AGC I Diacylglycerol-activated/phospholipid-dependent protein kinase C (PKC) family; PKCth // 1.0E-148","Protein.Domains":"---","InterPro":"--- // --- // 4.8E-21 /// --- // --- // 5.1E-27 /// --- // --- // 3.8E-82 /// --- // --- // 8.6E-43 /// --- // --- // 4.8E-21 /// --- // --- // 5.1E-27 /// --- // --- // 3.8E-82 /// --- // --- // 8.6E-43 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 4.8E-21 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 5.1E-27 /// IPR000719 // Protein kinase // 3.8E-82 /// IPR000961 // Protein kinase C-terminal domain // 8.6E-43","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_006257(11)","Transcript.Assignments":"NM_006257 // Homo sapiens protein kinase C, theta (PRKCQ), mRNA. // refseq // 11 // --- /// ENST00000263125 // cdna:known-ccds chromosome:NCBI36:10:6509111:6662269:-1 gene:ENSG00000065675 CCDS7079.1 // ensembl_transcript // 11 // --- /// ENST00000357287 // cdna:known chromosome:NCBI36:10:6509140:6662244:-1 gene:ENSG00000065675 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9523"}
{"Probe.Set.ID":"210039_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g558098","Target.Description":"gb:L01087.1 /DEF=Human protein kinase C-theta (PRKCT) mRNA, complete cds. /FEA=mRNA /GEN=PRKCT /PROD=protein kinase C-theta /DB_XREF=gi:558098 /UG=Hs.211593 protein kinase C, theta /FL=gb:L07032.1 gb:NM_006257.1 gb:L01087.1","Representative.Public.ID":"L01087","Archival.UniGene.Cluster":"Hs.211593","UniGene.ID":"Hs.498570","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:6509633-6662269 (-) // 98.15 // p15.1","Gene.Title":"protein kinase C, theta","Gene.Symbol":"PRKCQ","Chromosomal.Location":"chr10p15","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000065675","Entrez.Gene":"5588","SwissProt":"Q04759 /// Q8N218","EC":"EC:2.7.1.37 /// EC:2.7.1.-","OMIM":"600448","RefSeq.Protein.ID":"NP_006248.1","RefSeq.Transcript.ID":"NM_006257","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1558 // regulation of cell growth // non-traceable author statement /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 6468 // protein amino acid phosphorylation // non-traceable author statement /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 7242 // intracellular signaling cascade // non-traceable author statement /// 51092 // activation of NF-kappaB transcription factor // inferred from direct assay","Gene.Ontology.Cellular.Component":"5622 // intracellular // non-traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 4674 // protein serine/threonine kinase activity // non-traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from electronic annotation /// 5524 // ATP binding // non-traceable author statement /// 8270 // zinc ion binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4713 // protein-tyrosine kinase activity // inferred from electronic annotation","Pathway":"G_Protein_Signaling // GenMAPP /// Wnt_signaling // GenMAPP /// Calcium_regulation_in_cardiac_cells // GenMAPP /// Smooth_muscle_contraction // GenMAPP","Protein.Families":"hanks // 1.2.8 // AGC group; AGC I Diacylglycerol-activated/phospholipid-dependent protein kinase C (PKC) family; PKCth // 1.0E-148","Protein.Domains":"---","InterPro":"--- // --- // 4.8E-21 /// --- // --- // 5.1E-27 /// --- // --- // 3.8E-82 /// --- // --- // 8.6E-43 /// --- // --- // 4.8E-21 /// --- // --- // 5.1E-27 /// --- // --- // 3.8E-82 /// --- // --- // 8.6E-43 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 4.8E-21 /// IPR002219 // Protein kinase C, phorbol ester/diacylglycerol binding // 5.1E-27 /// IPR000719 // Protein kinase // 3.8E-82 /// IPR000961 // Protein kinase C-terminal domain // 9.8E-43 /// IPR000961 // Protein kinase C-terminal domain // 8.6E-43","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"L01087(11),NM_006257(10)","Transcript.Assignments":"L01087 // Human protein kinase C-theta (PRKCT) mRNA, complete cds. // gb // 11 // --- /// NM_006257 // Homo sapiens protein kinase C, theta (PRKCQ), mRNA. // refseq // 10 // --- /// ENST00000263125 // cdna:known-ccds chromosome:NCBI36:10:6509111:6662269:-1 gene:ENSG00000065675 CCDS7079.1 // ensembl_transcript // 10 // --- /// ENST00000357287 // cdna:known chromosome:NCBI36:10:6509140:6662244:-1 gene:ENSG00000065675 // ensembl_transcript // 10 // ---","Annotation.Notes":"GENSCAN00000002821 // ensembl_prediction // 1 // Cross Hyb Matching Probes","_row":"9524"}
{"Probe.Set.ID":"205358_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4758479","Target.Description":"gb:NM_000826.1 /DEF=Homo sapiens glutamate receptor, ionotropic, AMPA 2 (GRIA2), mRNA. /FEA=mRNA /GEN=GRIA2 /PROD=glutamate receptor precursor, flip isoform /DB_XREF=gi:4758479 /UG=Hs.89582 glutamate receptor, ionotropic, AMPA 2 /FL=gb:NM_000826.1 gb:L20814.1","Representative.Public.ID":"NM_000826","Archival.UniGene.Cluster":"Hs.89582","UniGene.ID":"Hs.32763","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:158361484-158504552 (+) // 99.88 // q32.1","Gene.Title":"glutamate receptor, ionotropic, AMPA 2","Gene.Symbol":"GRIA2","Chromosomal.Location":"chr4q32-q33","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000120251","Entrez.Gene":"2891","SwissProt":"P42262 /// Q59F93","EC":"---","OMIM":"138247","RefSeq.Protein.ID":"NP_000817.2","RefSeq.Transcript.ID":"NM_000826","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation /// 45211 // postsynaptic membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 4971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // traceable author statement /// 5215 // transporter activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5234 // glutamate-gated ion channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 15277 // kainate selective glutamate receptor activity // traceable author statement /// 8066 // glutamate receptor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001320 // Ionotropic glutamate receptor // 1.0E-126 /// IPR001828 // Extracellular ligand-binding receptor // 1.2E-43","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL832605(11),NM_000826(11)","Transcript.Assignments":"AL832605 // Homo sapiens mRNA; cDNA DKFZp451E2217 (from clone DKFZp451E2217). // gb // 11 // --- /// NM_000826 // Homo sapiens glutamate receptor, ionotropic, AMPA 2 (GRIA2), mRNA. // refseq // 11 // --- /// ENST00000296526 // cdna:known-ccds chromosome:NCBI36:4:158361297:158506677:1 gene:ENSG00000120251 CCDS3797.1 // ensembl_transcript // 11 // --- /// ENST00000264426 // cdna:known chromosome:NCBI36:4:158361366:158504547:1 gene:ENSG00000120251 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000012068 // ensembl_prediction // 2 // Cross Hyb Matching Probes","_row":"4885"}
{"Probe.Set.ID":"203942_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g9845486","Target.Description":"gb:NM_017490.1 /DEF=Homo sapiens ELKL motif kinase (EMK1), transcript variant 1, mRNA. /FEA=mRNA /GEN=EMK1 /PROD=ELKL motif kinase 1 isoform a /DB_XREF=gi:9845486 /UG=Hs.157199 ELKL motif kinase /FL=gb:NM_017490.1","Representative.Public.ID":"NM_017490","Archival.UniGene.Cluster":"Hs.157199","UniGene.ID":"Hs.567261","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:63412650-63433628 (+) // 99.05 // q13.1","Gene.Title":"MAP/microtubule affinity-regulating kinase 2","Gene.Symbol":"MARK2","Chromosomal.Location":"chr11q12-q13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000072518","Entrez.Gene":"2011","SwissProt":"Q5DNC5 /// Q5DNC6 /// Q7KZI7","EC":"---","OMIM":"600526","RefSeq.Protein.ID":"NP_001034557.1 /// NP_001034558.1 /// NP_004945.3 /// NP_059672.2","RefSeq.Transcript.ID":"NM_001039468 /// NM_001039469 /// NM_004954 /// NM_017490","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6468 // protein amino acid phosphorylation // inferred from direct assay /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7243 // protein kinase cascade // inferred from direct assay /// 30154 // cell differentiation // inferred from electronic annotation /// 45197 // establishment and/or maintenance of epithelial cell polarity // inferred from direct assay /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from mutant phenotype /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from direct assay /// 4674 // protein serine/threonine kinase activity // inferred from direct assay /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from direct assay /// 5524 // ATP binding // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 4713 // protein-tyrosine kinase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"hanks // 2.2.4 // CaMK Group; CaMK II KIN1/SNF1/Nim1; p78 // 1.0E-138 /// hanks // 2.2.4 // CaMK Group; CaMK II KIN1/SNF1/Nim1; p78 // 1.0E-139","Protein.Domains":"---","InterPro":"--- // --- // 1.1E-22 /// --- // --- // 1.4E-103 /// --- // --- // 1.1E-22 /// --- // --- // 1.1E-22 /// IPR001772 // Kinase-associated, C-terminal // 1.1E-22 /// IPR000719 // Protein kinase // 1.4E-103","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC008771(10),NM_001039468(10),NM_001039469(10),NM_004954(10),NM_017490(10)","Transcript.Assignments":"ENSESTT00000053991 // --- // ensembl_est // 10 // --- /// ENSESTT00000053994 // --- // ensembl_est // 10 // --- /// CR602633 // full-length cDNA clone CS0DI010YC19 of Placenta Cot 25-normalized of Homo sapiens (human). // gb // 10 // --- /// BC008771 // Homo sapiens MAP/microtubule affinity-regulating kinase 2, mRNA (cDNA clone IMAGE:3139103), partial cds. // gb // 10 // --- /// NM_017490 // Homo sapiens MAP/microtubule affinity-regulating kinase 2 (MARK2), transcript variant 1, mRNA. // refseq // 10 // --- /// NM_004954 // Homo sapiens MAP/microtubule affinity-regulating kinase 2 (MARK2), transcript variant 2, mRNA. // refseq // 10 // --- /// NM_001039468 // Homo sapiens MAP/microtubule affinity-regulating kinase 2 (MARK2), transcript variant 3, mRNA. // refseq // 10 // --- /// NM_001039469 // Homo sapiens MAP/microtubule affinity-regulating kinase 2 (MARK2), transcript variant 4, mRNA. // refseq // 10 // --- /// ENST00000350490 // cdna:known-ccds chromosome:NCBI36:11:63363517:63433621:1 gene:ENSG00000072518 CCDS8051.1 // ensembl_transcript // 10 // --- /// ENST00000265458 // cdna:known chromosome:NCBI36:11:63363584:63433621:1 gene:ENSG00000072518 // ensembl_transcript // 10 // --- /// ENST00000377810 // cdna:known chromosome:NCBI36:11:63363584:63433621:1 gene:ENSG00000072518 // ensembl_transcript // 10 // --- /// ENST00000377809 // cdna:novel chromosome:NCBI36:11:63363584:63433621:1 gene:ENSG00000072518 // ensembl_transcript // 10 // --- /// ENST00000361128 // cdna:novel chromosome:NCBI36:11:63363584:63433621:1 gene:ENSG00000072518 // ensembl_transcript // 10 // --- /// ENST00000315032 // cdna:known chromosome:NCBI36:11:63412651:63433621:1 gene:ENSG00000072518 // ensembl_transcript // 10 // ---","Annotation.Notes":"ENSESTT00000053992 // ensembl_est // 8 // Cross Hyb Matching Probes /// GENSCAN00000036603 // ensembl_prediction // 8 // Cross Hyb Matching Probes","_row":"3469"}
{"Probe.Set.ID":"211082_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g405732","Target.Description":"gb:Z25427.1 /DEF=H.sapiens protein-serinethreonine kinase gene, complete CDS. /FEA=mRNA /PROD=protein-serinethreonine kinase /DB_XREF=gi:405732 /FL=gb:Z25427.1","Representative.Public.ID":"Z25427","Archival.UniGene.Cluster":"--- /// Hs.901133","UniGene.ID":"Hs.567261","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:63423972-63424085 (+) // 78.47 // q13.1","Gene.Title":"MAP/microtubule affinity-regulating kinase 2 /// MAP/microtubule affinity-regulating kinase 2","Gene.Symbol":"MARK2","Chromosomal.Location":"chr11q12-q13","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"2011","SwissProt":"Q5DNC5 /// Q5DNC6 /// Q7KZI7","EC":"---","OMIM":"600526","RefSeq.Protein.ID":"NP_001034557.1 /// NP_001034558.1 /// NP_004945.3 /// NP_059672.2","RefSeq.Transcript.ID":"NM_001039468 /// NM_001039469 /// NM_004954 /// NM_017490","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6468 // protein amino acid phosphorylation // inferred from direct assay /// 6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 7243 // protein kinase cascade // inferred from direct assay /// 30154 // cell differentiation // inferred from electronic annotation /// 45197 // establishment and/or maintenance of epithelial cell polarity // inferred from direct assay /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from mutant phenotype /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from direct assay /// 4674 // protein serine/threonine kinase activity // inferred from direct assay /// 4674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // inferred from direct assay /// 5524 // ATP binding // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 2.0E-15","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"Z25427(11)","Transcript.Assignments":"Z25427 // H.sapiens protein-serine/threonine kinase gene, complete CDS. // gb // 11 // ---","Annotation.Notes":"ENSESTT00000053988 // ensembl_est // 7 // Cross Hyb Matching Probes /// BC008771 // gb // 7 // Cross Hyb Matching Probes /// NM_017490 // refseq // 7 // Cross Hyb Matching Probes /// NM_004954 // refseq // 7 // Cross Hyb Matching Probes /// NM_001039468 // refseq // 7 // Cross Hyb Matching Probes /// NM_001039469 // refseq // 7 // Cross Hyb Matching Probes /// GENSCAN00000036603 // ensembl_prediction // 7 // Cross Hyb Matching Probes /// ENST00000350490 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// ENST00000265458 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// ENST00000377810 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// ENST00000377809 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// ENST00000361128 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// ENST00000315032 // ensembl_transcript // 7 // Cross Hyb Matching Probes","_row":"10526"}
{"Probe.Set.ID":"204916_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5032018","Target.Description":"gb:NM_005855.1 /DEF=Homo sapiens receptor (calcitonin) activity modifying protein 1 (RAMP1), mRNA.  /FEA=mRNA /GEN=RAMP1 /PROD=receptor (calcitonin) activity modifying protein1 precursor /DB_XREF=gi:5032018 /UG=Hs.32989 receptor (calcitonin) activity modifying protein 1 /FL=gb:BC000548.1 gb:NM_005855.1","Representative.Public.ID":"NM_005855","Archival.UniGene.Cluster":"Hs.32989","UniGene.ID":"Hs.471783","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:238433025-238485485 (+) // 100.0 // q37.3","Gene.Title":"receptor (calcitonin) activity modifying protein 1","Gene.Symbol":"RAMP1","Chromosomal.Location":"chr2q36-q37.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000132329","Entrez.Gene":"10267","SwissProt":"O60894 /// Q6FGS5","EC":"---","OMIM":"605153","RefSeq.Protein.ID":"NP_005846.1","RefSeq.Transcript.ID":"NM_005855","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6810 // transport // inferred from electronic annotation /// 6886 // intracellular protein transport // inferred from electronic annotation /// 8277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 8277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 8565 // protein transporter activity // traceable author statement /// 8565 // protein transporter activity // inferred from electronic annotation","Pathway":"Smooth_muscle_contraction // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006985 // Receptor activity modifying protein // 7.0E-82","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005855(11)","Transcript.Assignments":"ENSESTT00000083359 // --- // ensembl_est // 11 // --- /// ENSESTT00000083360 // --- // ensembl_est // 11 // --- /// NM_005855 // Homo sapiens receptor (calcitonin) activity modifying protein 1 (RAMP1), mRNA. // refseq // 11 // --- /// ENST00000254661 // cdna:known-ccds chromosome:NCBI36:2:238432926:238485492:1 gene:ENSG00000132329 CCDS2522.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000059070 // ensembl_est // 1 // Cross Hyb Matching Probes /// ENSESTT00000059071 // ensembl_est // 1 // Cross Hyb Matching Probes /// BX648377 // gb // 1 // Cross Hyb Matching Probes /// XM_937905 // refseq // 1 // Cross Hyb Matching Probes /// GENSCAN00000019060 // ensembl_prediction // 4 // Cross Hyb Matching Probes /// GENSCAN00000037423 // ensembl_prediction // 1 // Cross Hyb Matching Probes /// ENST00000340381 // ensembl_transcript // 1 // Cross Hyb Matching Probes /// ENST00000377376 // ensembl_transcript // 1 // Cross Hyb Matching Probes","_row":"4443"}
{"Probe.Set.ID":"205051_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4557694","Target.Description":"gb:NM_000222.1 /DEF=Homo sapiens v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT), mRNA.  /FEA=mRNA /GEN=KIT /PROD=v-kit Hardy-Zuckerman 4 feline sarcoma viraloncogene homolog precursor /DB_XREF=gi:4557694 /UG=Hs.81665 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog /FL=gb:NM_000222.1","Representative.Public.ID":"NM_000222","Archival.UniGene.Cluster":"Hs.81665","UniGene.ID":"Hs.479754","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr4:55218917-55301612 (+) // 97.23 // q12","Gene.Title":"v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog","Gene.Symbol":"KIT","Chromosomal.Location":"chr4q11-q12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000157404","Entrez.Gene":"3815","SwissProt":"P10721 /// Q6IQ28 /// Q8TCG9","EC":"EC:2.7.1.112","OMIM":"164920 /// 172800 /// 273300 /// 601626 /// 606764","RefSeq.Protein.ID":"NP_000213.1","RefSeq.Transcript.ID":"NM_000222","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6468 // protein amino acid phosphorylation // inferred from electronic annotation /// 6470 // protein amino acid dephosphorylation // not recorded /// 7165 // signal transduction // traceable author statement /// 7169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 4716 // receptor signaling protein tyrosine kinase activity // traceable author statement /// 4872 // receptor activity // inferred from electronic annotation /// 5021 // vascular endothelial growth factor receptor activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 4672 // protein kinase activity // inferred from electronic annotation /// 4713 // protein-tyrosine kinase activity // inferred from electronic annotation /// 4714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 16301 // kinase activity // inferred from electronic annotation /// 4713 // protein-tyrosine kinase activity // traceable author statement /// 4714 // transmembrane receptor protein tyrosine kinase activity // not recorded","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000719 // Protein kinase // 5.2E-20 /// IPR000719 // Protein kinase // 8.4E-58 /// IPR007110 // Immunoglobulin-like // 8.6E-10","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000222(11)","Transcript.Assignments":"NM_000222 // Homo sapiens v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT), mRNA. // refseq // 11 // --- /// ENST00000381345 // cdna:known-ccds chromosome:NCBI36:4:55218842:55301638:1 gene:ENSG00000157404 CCDS3496.1 // ensembl_transcript // 11 // --- /// ENST00000288135 // cdna:known chromosome:NCBI36:4:55218863:55301636:1 gene:ENSG00000157404 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"4578"}
{"Probe.Set.ID":"212010_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.283690.1","Target.Description":"Consensus includes gb:AK025647.1 /DEF=Homo sapiens cDNA: FLJ21994 fis, clone HEP06577, highly similar to AF103803 Homo sapiens clone H41 unknown mRNA.  /FEA=mRNA /DB_XREF=gi:10438231 /UG=Hs.283690 hypothetical protein /FL=gb:NM_017548.1","Representative.Public.ID":"AK025647","Archival.UniGene.Cluster":"Hs.283690","UniGene.ID":"Hs.518265","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:134775263-134791795 (+) // 93.13 // q22.1","Gene.Title":"CDV3 homolog (mouse)","Gene.Symbol":"CDV3","Chromosomal.Location":"chr3q22.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000091527","Entrez.Gene":"55573","SwissProt":"Q96IP9 /// Q9UKY7","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_060018.1","RefSeq.Transcript.ID":"NM_017548","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"8283 // cell proliferation // non-traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK096865(11),NM_017548(11)","Transcript.Assignments":"AK096865 // Homo sapiens cDNA FLJ39546 fis, clone PUAEN2009534. // gb // 11 // --- /// NM_017548 // Homo sapiens CDV3 homolog (mouse) (CDV3), mRNA. // refseq // 11 // --- /// ENST00000264993 // cdna:known-ccds chromosome:NCBI36:3:134775264:134791794:1 gene:ENSG00000091527 CCDS3079.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"11397"}
{"Probe.Set.ID":"213548_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.283690.2","Target.Description":"Consensus includes gb:BG257762 /FEA=EST /DB_XREF=gi:12767578 /DB_XREF=est:602377462F1 /CLONE=IMAGE:4508319 /UG=Hs.283690 hypothetical protein","Representative.Public.ID":"BG257762","Archival.UniGene.Cluster":"Hs.283690","UniGene.ID":"Hs.518265","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:134776248-134789907 (+) // 86.92 // q22.1","Gene.Title":"CDV3 homolog (mouse)","Gene.Symbol":"CDV3","Chromosomal.Location":"chr3q22.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000091527","Entrez.Gene":"55573","SwissProt":"Q96IP9 /// Q9UKY7","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_060018.1","RefSeq.Transcript.ID":"NM_017548","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"8283 // cell proliferation // non-traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK096865(11),NM_017548(11)","Transcript.Assignments":"AK096865 // Homo sapiens cDNA FLJ39546 fis, clone PUAEN2009534. // gb // 11 // --- /// NM_017548 // Homo sapiens CDV3 homolog (mouse) (CDV3), mRNA. // refseq // 11 // --- /// ENST00000264993 // cdna:known-ccds chromosome:NCBI36:3:134775264:134791794:1 gene:ENSG00000091527 CCDS3079.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000087862 // ensembl_est // 8 // Cross Hyb Matching Probes /// GENSCAN00000067453 // ensembl_prediction // 3 // Cross Hyb Matching Probes","_row":"12929"}
{"Probe.Set.ID":"213554_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.283690.2","Target.Description":"Consensus includes gb:AI928407 /FEA=EST /DB_XREF=gi:5664371 /DB_XREF=est:wo96h09.x1 /CLONE=IMAGE:2463233 /UG=Hs.283690 hypothetical protein","Representative.Public.ID":"AI928407","Archival.UniGene.Cluster":"Hs.283690","UniGene.ID":"Hs.518265","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:134776248-134789907 (+) // 86.92 // q22.1","Gene.Title":"CDV3 homolog (mouse)","Gene.Symbol":"CDV3","Chromosomal.Location":"chr3q22.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000091527","Entrez.Gene":"55573","SwissProt":"Q96IP9 /// Q9UKY7","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_060018.1","RefSeq.Transcript.ID":"NM_017548","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"8283 // cell proliferation // non-traceable author statement","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK096865(11),BC007338(11),NM_017548(11)","Transcript.Assignments":"ENSESTT00000087862 // --- // ensembl_est // 11 // --- /// AK096865 // Homo sapiens cDNA FLJ39546 fis, clone PUAEN2009534. // gb // 11 // --- /// BC007338 // Homo sapiens CDV3 homolog (mouse), mRNA (cDNA clone MGC:15222 IMAGE:3619262), complete cds. // gb // 11 // --- /// NM_017548 // Homo sapiens CDV3 homolog (mouse) (CDV3), mRNA. // refseq // 11 // --- /// GENSCAN00000067453 // cdna:Genscan chromosome:NCBI36:3:134775579:134789580:1 // ensembl_prediction // 10 // --- /// ENST00000264993 // cdna:known-ccds chromosome:NCBI36:3:134775264:134791794:1 gene:ENSG00000091527 CCDS3079.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000010157 // ensembl_prediction // 3 // Cross Hyb Matching Probes /// ENST00000341636 // ensembl_transcript // 3 // Cross Hyb Matching Probes","_row":"12935"}
{"Probe.Set.ID":"218473_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13375904","Target.Description":"gb:NM_024656.1 /DEF=Homo sapiens hypothetical protein FLJ22329 (FLJ22329), mRNA. /FEA=mRNA /GEN=FLJ22329 /PROD=hypothetical protein FLJ22329 /DB_XREF=gi:13375904 /UG=Hs.61478 hypothetical protein FLJ22329 /FL=gb:NM_024656.1","Representative.Public.ID":"NM_024656","Archival.UniGene.Cluster":"Hs.61478","UniGene.ID":"Hs.418795","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr19:17549245-17554967 (+) // 74.69 // p13.11","Gene.Title":"glycosyltransferase 25 domain containing 1","Gene.Symbol":"GLT25D1","Chromosomal.Location":"chr19p13.11","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000130309","Entrez.Gene":"79709","SwissProt":"Q6IPW8 /// Q8NBJ5 /// Q8NC64 /// Q8WUI9 /// Q9H6F1","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_078932.2","RefSeq.Transcript.ID":"NM_024656","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"9103 // lipopolysaccharide biosynthesis // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"16740 // transferase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002654 // Glycosyl transferase, family 25 // 1.8E-59","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK057140(11),NM_024656(10)","Transcript.Assignments":"AK057140 // Homo sapiens cDNA FLJ32578 fis, clone SPLEN2000258. // gb // 11 // --- /// NM_024656 // Homo sapiens glycosyltransferase 25 domain containing 1 (GLT25D1), mRNA. // refseq // 10 // --- /// ENST00000252599 // cdna:known-ccds chromosome:NCBI36:19:17527511:17554965:1 gene:ENSG00000130309 CCDS12363.1 // ensembl_transcript // 11 // --- /// ENST00000379714 // cdna:known chromosome:NCBI36:19:17527511:17554965:1 gene:ENSG00000130309 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000062900 // ensembl_prediction // 1 // Cross Hyb Matching Probes","_row":"17838"}
{"Probe.Set.ID":"209512_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13279253","Target.Description":"gb:BC004331.1 /DEF=Homo sapiens, Similar to RIKEN cDNA 2610207I16 gene, clone MGC:10940, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to RIKEN cDNA 2610207I16 gene /DB_XREF=gi:13279253 /UG=Hs.47986 Homo sapiens, Similar to RIKEN cDNA 2610207I16 gene, clone MGC:10940, mRNA, complete cds /FL=gb:BC004331.1","Representative.Public.ID":"BC004331","Archival.UniGene.Cluster":"Hs.47986","UniGene.ID":"Hs.59486","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr9:114182180-114274505 (+) // 68.2 // q32","Gene.Title":"hydroxysteroid dehydrogenase like 2","Gene.Symbol":"HSDL2","Chromosomal.Location":"chr9q32","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000119471","Entrez.Gene":"84263","SwissProt":"Q658M8 /// Q6YN16 /// Q9BT58","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_115679.2","RefSeq.Transcript.ID":"NM_032303","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"8152 // metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5498 // sterol carrier activity // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR003033 // Sterol-binding // 3.7E-29 /// IPR002198 // Short-chain dehydrogenase/reductase SDR // 9.8E-37 /// IPR003033 // Sterol-binding // 3.7E-29 /// IPR002198 // Short-chain dehydrogenase/reductase SDR // 1.9E-17","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_032303(11)","Transcript.Assignments":"NM_032303 // Homo sapiens hydroxysteroid dehydrogenase like 2 (HSDL2), mRNA. // refseq // 11 // --- /// ENST00000262542 // cdna:known chromosome:NCBI36:9:114196641:114274505:1 gene:ENSG00000119471 // ensembl_transcript // 11 // --- /// ENST00000338786 // cdna:known chromosome:NCBI36:9:114196641:114274505:1 gene:ENSG00000119471 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9005"}
{"Probe.Set.ID":"209513_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13279253","Target.Description":"gb:BC004331.1 /DEF=Homo sapiens, Similar to RIKEN cDNA 2610207I16 gene, clone MGC:10940, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to RIKEN cDNA 2610207I16 gene /DB_XREF=gi:13279253 /UG=Hs.47986 Homo sapiens, Similar to RIKEN cDNA 2610207I16 gene, clone MGC:10940, mRNA, complete cds /FL=gb:BC004331.1","Representative.Public.ID":"BC004331","Archival.UniGene.Cluster":"Hs.47986","UniGene.ID":"Hs.59486","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr9:114182180-114274505 (+) // 68.2 // q32","Gene.Title":"hydroxysteroid dehydrogenase like 2","Gene.Symbol":"HSDL2","Chromosomal.Location":"chr9q32","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000119471","Entrez.Gene":"84263","SwissProt":"Q658M8 /// Q6YN16 /// Q9BT58","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_115679.2","RefSeq.Transcript.ID":"NM_032303","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"8152 // metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5498 // sterol carrier activity // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR003033 // Sterol-binding // 3.7E-29 /// IPR002198 // Short-chain dehydrogenase/reductase SDR // 9.8E-37 /// IPR003033 // Sterol-binding // 3.7E-29 /// IPR002198 // Short-chain dehydrogenase/reductase SDR // 1.9E-17","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_032303(11)","Transcript.Assignments":"NM_032303 // Homo sapiens hydroxysteroid dehydrogenase like 2 (HSDL2), mRNA. // refseq // 11 // --- /// ENST00000262542 // cdna:known chromosome:NCBI36:9:114196641:114274505:1 gene:ENSG00000119471 // ensembl_transcript // 11 // --- /// ENST00000338786 // cdna:known chromosome:NCBI36:9:114196641:114274505:1 gene:ENSG00000119471 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9006"}
{"Probe.Set.ID":"215436_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.301488.0","Target.Description":"Consensus includes gb:AK023959.1 /DEF=Homo sapiens cDNA FLJ13897 fis, clone THYRO1001706. /FEA=mRNA /DB_XREF=gi:10436079 /UG=Hs.301488 Homo sapiens cDNA FLJ13897 fis, clone THYRO1001706","Representative.Public.ID":"AK023959","Archival.UniGene.Cluster":"Hs.301488","UniGene.ID":"Hs.59486","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr9:114274230-114277602 (+) // 6.54 // q32","Gene.Title":"Hydroxysteroid dehydrogenase like 2","Gene.Symbol":"HSDL2","Chromosomal.Location":"chr9q32","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"84263","SwissProt":"Q658M8 /// Q6YN16 /// Q9BT58","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_115679.2","RefSeq.Transcript.ID":"NM_032303","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"8152 // metabolism // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5498 // sterol carrier activity // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AK023959(11)","Transcript.Assignments":"AK023959 // Homo sapiens cDNA FLJ13897 fis, clone THYRO1001706. // gb // 11 // ---","Annotation.Notes":"---","_row":"14810"}
{"Probe.Set.ID":"217511_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.155234.0","Target.Description":"Consensus includes gb:W28828 /FEA=EST /DB_XREF=gi:1308776 /DB_XREF=est:52c6 /UG=Hs.155234 ESTs, Weakly similar to KRHU0 keratin 10, type I, cytoskeletal H.sapiens","Representative.Public.ID":"W28828","Archival.UniGene.Cluster":"Hs.155234","UniGene.ID":"Hs.632079","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:102814868-102815471 (+) // 94.95 // q24.31","Gene.Title":"Kazal-type serine peptidase inhibitor domain 1","Gene.Symbol":"KAZALD1","Chromosomal.Location":"chr10q24.31","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000107821","Entrez.Gene":"81621","SwissProt":"Q96I82","EC":"---","OMIM":"609208","RefSeq.Protein.ID":"NP_112191.2","RefSeq.Transcript.ID":"NM_030929","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1503 // ossification // inferred from electronic annotation /// 1558 // regulation of cell growth // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5576 // extracellular region // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5520 // insulin-like growth factor binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002350 // Serine protease inhibitor, Kazal type // 2.7E-6 /// IPR007110 // Immunoglobulin-like // 1.5E-6","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_030929(9)","Transcript.Assignments":"NM_030929 // Homo sapiens Kazal-type serine peptidase inhibitor domain 1 (KAZALD1), mRNA. // refseq // 9 // --- /// ENST00000370200 // cdna:known chromosome:NCBI36:10:102811006:102815339:1 gene:ENSG00000107821 // ensembl_transcript // 9 // ---","Annotation.Notes":"---","_row":"16876"}
{"Probe.Set.ID":"221000_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g13569890","Target.Description":"gb:NM_030929.1 /DEF=Homo sapiens hypothetical protein FKSG28 (FKSG28), mRNA. /FEA=mRNA /GEN=FKSG28 /PROD=hypothetical protein FKSG28 /DB_XREF=gi:13569890 /FL=gb:NM_030929.1","Representative.Public.ID":"NM_030929","Archival.UniGene.Cluster":"--- /// Hs.900120","UniGene.ID":"Hs.632079","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:102812249-102817876 (+) // 91.5 // q24.31","Gene.Title":"Kazal-type serine peptidase inhibitor domain 1 /// Kazal-type serine peptidase inhibitor domain 1","Gene.Symbol":"KAZALD1","Chromosomal.Location":"chr10q24.31","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000107821","Entrez.Gene":"81621","SwissProt":"Q96I82","EC":"---","OMIM":"609208","RefSeq.Protein.ID":"NP_112191.2","RefSeq.Transcript.ID":"NM_030929","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1503 // ossification // inferred from electronic annotation /// 1558 // regulation of cell growth // inferred from electronic annotation /// 30154 // cell differentiation // inferred from electronic annotation /// 7275 // development // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5576 // extracellular region // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"5520 // insulin-like growth factor binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.7E-6 /// --- // --- // 1.5E-6 /// IPR002350 // Serine protease inhibitor, Kazal type // 2.7E-6","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF333487(11),AK172864(9)","Transcript.Assignments":"ENSESTT00000055877 // --- // ensembl_est // 11 // --- /// AF333487 // Homo sapiens FKSG40 (FKSG40) mRNA, complete cds. // gb // 11 // --- /// AK172864 // Homo sapiens cDNA FLJ24094 fis, clone KAIA397. // gb // 9 // --- /// ENST00000224809 // cdna:known-ccds chromosome:NCBI36:10:102810989:102817848:1 gene:ENSG00000107821 CCDS7509.1 // ensembl_transcript // 9 // --- /// ENST00000313664 // cdna:novel chromosome:NCBI36:10:102812250:102817800:1 gene:ENSG00000107821 // ensembl_transcript // 9 // --- /// ENST00000370199 // cdna:novel chromosome:NCBI36:10:102812289:102817878:1 gene:ENSG00000107821 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000055878 // ensembl_est // 5 // Cross Hyb Matching Probes /// ENSESTT00000055879 // ensembl_est // 6 // Cross Hyb Matching Probes /// BC053611 // gb // 6 // Cross Hyb Matching Probes /// NM_030929 // refseq // 5 // Cross Hyb Matching Probes /// GENSCAN00000006928 // ensembl_prediction // 5 // Cross Hyb Matching Probes /// ENST00000370200 // ensembl_transcript // 5 // Cross Hyb Matching Probes","_row":"20364"}
{"Probe.Set.ID":"200712_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.234279.0","Target.Description":"Consensus includes gb:AI633566 /FEA=EST /DB_XREF=gi:4684896 /DB_XREF=est:th68f09.x1 /CLONE=IMAGE:2123849 /UG=Hs.234279 microtubule-associated protein, RPEB family, member 1 /FL=gb:NM_012325.1 gb:U24166.1","Representative.Public.ID":"AI633566","Archival.UniGene.Cluster":"Hs.234279","UniGene.ID":"Hs.472437","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr20:30871363-30901872 (+) // 96.8 // q11.21","Gene.Title":"microtubule-associated protein, RP/EB family, member 1","Gene.Symbol":"MAPRE1","Chromosomal.Location":"chr20q11.1-11.23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000101367","Entrez.Gene":"22919","SwissProt":"Q15691 /// Q3KQS8","EC":"---","OMIM":"603108","RefSeq.Protein.ID":"NP_036457.1","RefSeq.Transcript.ID":"NM_012325","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // traceable author statement /// 7049 // cell cycle // inferred from electronic annotation /// 7067 // mitosis // inferred from electronic annotation /// 8283 // cell proliferation // traceable author statement /// 51301 // cell division // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5874 // microtubule // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"8017 // microtubule binding // inferred from electronic annotation /// 8022 // protein C-terminus binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR004953 // EB1 protein // 3.3E-30 /// IPR001715 // Calponin-like actin-binding // 4.8E-17","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_012325(11)","Transcript.Assignments":"ENSESTT00000073054 // --- // ensembl_est // 11 // --- /// NM_012325 // Homo sapiens microtubule-associated protein, RP/EB family, member 1 (MAPRE1), mRNA. // refseq // 11 // --- /// ENST00000375571 // cdna:known-ccds chromosome:NCBI36:20:30871395:30901872:1 gene:ENSG00000101367 CCDS13208.1 // ensembl_transcript // 11 // --- /// ENST00000217347 // cdna:known chromosome:NCBI36:20:30871437:30901871:1 gene:ENSG00000101367 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000021618 // ensembl_prediction // 3 // Cross Hyb Matching Probes","_row":"240"}
{"Probe.Set.ID":"200713_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6912493","Target.Description":"gb:NM_012325.1 /DEF=Homo sapiens microtubule-associated protein, RPEB family, member 1 (MAPRE1), mRNA.  /FEA=mRNA /GEN=MAPRE1 /PROD=microtubule-associated protein, RPEB family,member 1 /DB_XREF=gi:6912493 /UG=Hs.234279 microtubule-associated protein, RPEB family, member 1 /FL=gb:NM_012325.1 gb:U24166.1","Representative.Public.ID":"NM_012325","Archival.UniGene.Cluster":"Hs.234279","UniGene.ID":"Hs.472437","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr20:30871434-30901865 (+) // 98.82 // q11.21 /// chr4:32687294-32689774 (-) // 90.04 // p15.1 /// chr8:136705013-136707457 (-) // 89.41 // q24.23","Gene.Title":"microtubule-associated protein, RP/EB family, member 1","Gene.Symbol":"MAPRE1","Chromosomal.Location":"chr20q11.1-11.23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000101367","Entrez.Gene":"22919","SwissProt":"Q15691 /// Q3KQS8","EC":"---","OMIM":"603108","RefSeq.Protein.ID":"NP_036457.1","RefSeq.Transcript.ID":"NM_012325","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // traceable author statement /// 7049 // cell cycle // inferred from electronic annotation /// 7067 // mitosis // inferred from electronic annotation /// 8283 // cell proliferation // traceable author statement /// 51301 // cell division // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5874 // microtubule // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"8017 // microtubule binding // inferred from electronic annotation /// 8022 // protein C-terminus binding // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR004953 // EB1 protein // 3.3E-30 /// IPR001715 // Calponin-like actin-binding // 4.8E-17","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_012325(11)","Transcript.Assignments":"NM_012325 // Homo sapiens microtubule-associated protein, RP/EB family, member 1 (MAPRE1), mRNA. // refseq // 11 // --- /// ENST00000375571 // cdna:known-ccds chromosome:NCBI36:20:30871395:30901872:1 gene:ENSG00000101367 CCDS13208.1 // ensembl_transcript // 11 // --- /// ENST00000217347 // cdna:known chromosome:NCBI36:20:30871437:30901871:1 gene:ENSG00000101367 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000020201 // ensembl_prediction // 1 // Negative Strand Matching Probes","_row":"241"}
{"Probe.Set.ID":"218250_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g10518495","Target.Description":"gb:NM_013354.2 /DEF=Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), mRNA.  /FEA=mRNA /GEN=CNOT7 /PROD=CCR4-NOT transcription complex, subunit 7 /DB_XREF=gi:10518495 /UG=Hs.226318 CCR4-NOT transcription complex, subunit 7 /FL=gb:NM_013354.2 gb:L46722.1","Representative.Public.ID":"NM_013354","Archival.UniGene.Cluster":"Hs.226318","UniGene.ID":"Hs.170553","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:115908481-115909754 (+) // 88.26 // p13.1 /// chr1_random:1250426-1251699 (+) // 88.26 // /// chr8:17132425-17148705 (-) // 96.48 // p22 /// chrX:69073562-69074795 (-) // 92.18 // q13.1","Gene.Title":"CCR4-NOT transcription complex, subunit 7","Gene.Symbol":"CNOT7","Chromosomal.Location":"chr8p22-p21.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000198791","Entrez.Gene":"29883","SwissProt":"Q7Z530 /// Q96IQ6 /// Q9UIV1","EC":"---","OMIM":"604913","RefSeq.Protein.ID":"NP_037486.2 /// NP_473367.2","RefSeq.Transcript.ID":"NM_013354 /// NM_054026","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"5975 // carbohydrate metabolism // traceable author statement /// 6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 16481 // negative regulation of transcription // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation /// 5634 // nucleus // inferred from expression pattern /// 30014 // CCR4-NOT complex // non-traceable author statement","Gene.Ontology.Molecular.Function":"3700 // transcription factor activity // traceable author statement /// 4871 // signal transducer activity // traceable author statement /// 5515 // protein binding // inferred from physical interaction /// 16564 // transcriptional repressor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR006941 // CAF1 family ribonuclease // 1.0E-126 /// IPR006941 // CAF1 family ribonuclease // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_013354(11)","Transcript.Assignments":"ENSESTT00000045719 // --- // ensembl_est // 11 // --- /// NM_013354 // Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000381917 // cdna:known chromosome:NCBI36:8:17131108:17148758:-1 gene:ENSG00000198791 // ensembl_transcript // 11 // --- /// ENST00000361231 // cdna:known chromosome:NCBI36:8:17131113:17148758:-1 gene:ENSG00000198791 // ensembl_transcript // 11 // --- /// ENST00000361272 // cdna:known-ccds chromosome:NCBI36:8:17131113:17148758:-1 gene:ENSG00000198791 CCDS6000.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000045718 // ensembl_est // 2 // Cross Hyb Matching Probes /// ENSESTT00000045720 // ensembl_est // 5 // Cross Hyb Matching Probes /// NM_054026 // refseq // 5 // Cross Hyb Matching Probes /// GENSCAN00000030525 // ensembl_prediction // 4 // Cross Hyb Matching Probes","_row":"17615"}
{"Probe.Set.ID":"211925_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g9438228","Target.Description":"gb:AY004175.1 /DEF=Homo sapiens phospholipase C beta 1 mRNA, complete cds. /FEA=CDS /PROD=phospholipase C beta 1 /DB_XREF=gi:9438228 /UG=Hs.41143 phosphoinositide-specific phospholipase C-beta 1 /FL=gb:AY004175.1","Representative.Public.ID":"AY004175","Archival.UniGene.Cluster":"Hs.41143","UniGene.ID":"Hs.431173","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr20:8076682-8810496 (+) // 99.53 // p12.3","Gene.Title":"phospholipase C, beta 1 (phosphoinositide-specific)","Gene.Symbol":"PLCB1","Chromosomal.Location":"chr20p12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000182621","Entrez.Gene":"23236","SwissProt":"Q6ZRR0 /// Q6ZTT6 /// Q9NQ66","EC":"EC:3.1.4.11","OMIM":"607120","RefSeq.Protein.ID":"NP_056007.1 /// NP_877398.1","RefSeq.Transcript.ID":"NM_015192 /// NM_182734","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // non-traceable author statement /// 6629 // lipid metabolism // inferred from electronic annotation /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 16042 // lipid catabolism // inferred from electronic annotation /// 7165 // signal transduction // inferred from electronic annotation /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // non-traceable author statement /// 5737 // cytoplasm // inferred from direct assay","Gene.Ontology.Molecular.Function":"4435 // phosphoinositide phospholipase C activity // inferred from electronic annotation /// 4435 // phosphoinositide phospholipase C activity // non-traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 16787 // hydrolase activity // inferred from electronic annotation /// 4629 // phospholipase C activity // inferred from electronic annotation","Pathway":"S1P_Signaling // GenMAPP /// Inositol phosphate metabolism // KEGG /// Calcium signaling pathway // KEGG /// Phosphatidylinositol signaling system // KEGG /// Wnt signaling pathway // KEGG /// VEGF signaling pathway // KEGG /// Gap junction // KEGG /// Fc epsilon RI signaling pathway // KEGG /// Leukocyte transendothelial migration // KEGG /// Long-term potentiation // KEGG /// Long-term depression // KEGG /// Epithelial cell signaling in Helicobacter pylori // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001711 // Phosphatidylinositol-specific phospholipase C, Y domain // 6.1E-86 /// IPR000909 // Phosphatidylinositol-specific phospholipase C, X domain // 1.0E-95 /// IPR000008 // C2 domain // 6.9E-18","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AJ278314(11),NM_015192(11),NM_182734(11)","Transcript.Assignments":"AJ278314 // Homo sapiens mRNA for phospholipase C-beta-1b (PLCB1 gene). // gb // 11 // --- /// NM_182734 // Homo sapiens phospholipase C, beta 1 (phosphoinositide-specific) (PLCB1), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_015192 // Homo sapiens phospholipase C, beta 1 (phosphoinositide-specific) (PLCB1), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000338037 // cdna:known-ccds chromosome:NCBI36:20:8060908:8813547:1 gene:ENSG00000182621 CCDS13102.1 // ensembl_transcript // 11 // --- /// ENST00000378641 // cdna:known-ccds chromosome:NCBI36:20:8060908:8813547:1 gene:ENSG00000182621 CCDS13103.1 // ensembl_transcript // 11 // --- /// ENST00000330472 // cdna:known chromosome:NCBI36:20:8061299:8810496:1 gene:ENSG00000182621 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000042967 // ensembl_est // 5 // Cross Hyb Matching Probes /// ENSESTT00000042968 // ensembl_est // 6 // Cross Hyb Matching Probes /// AK023689 // gb // 3 // Cross Hyb Matching Probes /// AL137267 // gb // 5 // Cross Hyb Matching Probes /// GENSCAN00000016704 // ensembl_prediction // 4 // Cross Hyb Matching Probes /// GENSCAN00000017502 // ensembl_prediction // 5 // Cross Hyb Matching Probes /// ENST00000378637 // ensembl_transcript // 5 // Cross Hyb Matching Probes /// ENST00000360925 // ensembl_transcript // 5 // Cross Hyb Matching Probes","_row":"11313"}
{"Probe.Set.ID":"213222_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.41143.0","Target.Description":"Consensus includes gb:AL049593 /DEF=Human DNA sequence from clone RP4-654A7 on chromosome 20. Contains the gene for phospholipase C-beta-1 (KIAA0581, 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta 1) (PLCB1, PLC-I), ESTs and GSSs /FEA=mRNA /DB_XREF=gi:10443476 /UG=Hs.41143 phosphoinositide-specific phospholipase C-beta 1 /FL=gb:NM_015192.1","Representative.Public.ID":"AL049593","Archival.UniGene.Cluster":"Hs.41143","UniGene.ID":"Hs.431173","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr20:8061295-8813547 (+) // 98.51 // p12.3","Gene.Title":"phospholipase C, beta 1 (phosphoinositide-specific)","Gene.Symbol":"PLCB1","Chromosomal.Location":"chr20p12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000182621","Entrez.Gene":"23236","SwissProt":"Q6ZRR0 /// Q6ZTT6 /// Q9NQ66","EC":"EC:3.1.4.11","OMIM":"607120","RefSeq.Protein.ID":"NP_056007.1 /// NP_877398.1","RefSeq.Transcript.ID":"NM_015192 /// NM_182734","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // non-traceable author statement /// 6629 // lipid metabolism // inferred from electronic annotation /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 16042 // lipid catabolism // inferred from electronic annotation /// 7165 // signal transduction // inferred from electronic annotation /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // non-traceable author statement /// 5737 // cytoplasm // inferred from direct assay","Gene.Ontology.Molecular.Function":"4435 // phosphoinositide phospholipase C activity // inferred from electronic annotation /// 4435 // phosphoinositide phospholipase C activity // non-traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 16787 // hydrolase activity // inferred from electronic annotation /// 4629 // phospholipase C activity // inferred from electronic annotation","Pathway":"S1P_Signaling // GenMAPP /// Inositol phosphate metabolism // KEGG /// Calcium signaling pathway // KEGG /// Phosphatidylinositol signaling system // KEGG /// Wnt signaling pathway // KEGG /// VEGF signaling pathway // KEGG /// Gap junction // KEGG /// Fc epsilon RI signaling pathway // KEGG /// Leukocyte transendothelial migration // KEGG /// Long-term potentiation // KEGG /// Long-term depression // KEGG /// Epithelial cell signaling in Helicobacter pylori // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001711 // Phosphatidylinositol-specific phospholipase C, Y domain // 6.1E-86 /// IPR000909 // Phosphatidylinositol-specific phospholipase C, X domain // 1.0E-95 /// IPR000008 // C2 domain // 6.9E-18","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_015192(11),NM_182734(11)","Transcript.Assignments":"NM_182734 // Homo sapiens phospholipase C, beta 1 (phosphoinositide-specific) (PLCB1), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_015192 // Homo sapiens phospholipase C, beta 1 (phosphoinositide-specific) (PLCB1), transcript variant 1, mRNA. // refseq // 11 // --- /// ENST00000338037 // cdna:known-ccds chromosome:NCBI36:20:8060908:8813547:1 gene:ENSG00000182621 CCDS13102.1 // ensembl_transcript // 11 // --- /// ENST00000378641 // cdna:known-ccds chromosome:NCBI36:20:8060908:8813547:1 gene:ENSG00000182621 CCDS13103.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"12604"}
{"Probe.Set.ID":"215687_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.41143.2","Target.Description":"Consensus includes gb:AA393484 /FEA=EST /DB_XREF=gi:2046452 /DB_XREF=est:zt71f01.r1 /CLONE=IMAGE:727801 /UG=Hs.41143 phosphoinositide-specific phospholipase C-beta 1","Representative.Public.ID":"AA393484","Archival.UniGene.Cluster":"Hs.41143","UniGene.ID":"Hs.431173","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr20:8061295-8810701 (+) // 99.87 // p12.3","Gene.Title":"phospholipase C, beta 1 (phosphoinositide-specific)","Gene.Symbol":"PLCB1","Chromosomal.Location":"chr20p12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000182621","Entrez.Gene":"23236","SwissProt":"Q6ZRR0 /// Q6ZTT6 /// Q9NQ66","EC":"EC:3.1.4.11","OMIM":"607120","RefSeq.Protein.ID":"NP_056007.1 /// NP_877398.1","RefSeq.Transcript.ID":"NM_015192 /// NM_182734","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"74 // regulation of progression through cell cycle // non-traceable author statement /// 6629 // lipid metabolism // inferred from electronic annotation /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 16042 // lipid catabolism // inferred from electronic annotation /// 7165 // signal transduction // inferred from electronic annotation /// 7165 // signal transduction // non-traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // non-traceable author statement /// 5737 // cytoplasm // inferred from direct assay","Gene.Ontology.Molecular.Function":"4435 // phosphoinositide phospholipase C activity // inferred from electronic annotation /// 4435 // phosphoinositide phospholipase C activity // non-traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation /// 5509 // calcium ion binding // inferred from electronic annotation /// 16787 // hydrolase activity // inferred from electronic annotation /// 4629 // phospholipase C activity // inferred from electronic annotation","Pathway":"S1P_Signaling // GenMAPP /// Inositol phosphate metabolism // KEGG /// Calcium signaling pathway // KEGG /// Phosphatidylinositol signaling system // KEGG /// Wnt signaling pathway // KEGG /// VEGF signaling pathway // KEGG /// Gap junction // KEGG /// Fc epsilon RI signaling pathway // KEGG /// Leukocyte transendothelial migration // KEGG /// Long-term potentiation // KEGG /// Long-term depression // KEGG /// Epithelial cell signaling in Helicobacter pylori // KEGG","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001711 // Phosphatidylinositol-specific phospholipase C, Y domain // 6.1E-86 /// IPR000909 // Phosphatidylinositol-specific phospholipase C, X domain // 1.0E-95 /// IPR000008 // C2 domain // 6.9E-18","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_182734(11)","Transcript.Assignments":"NM_182734 // Homo sapiens phospholipase C, beta 1 (phosphoinositide-specific) (PLCB1), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000378641 // cdna:known-ccds chromosome:NCBI36:20:8060908:8813547:1 gene:ENSG00000182621 CCDS13103.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000042968 // ensembl_est // 8 // Cross Hyb Matching Probes /// AJ278314 // gb // 7 // Cross Hyb Matching Probes /// AL137267 // gb // 3 // Cross Hyb Matching Probes /// NM_015192 // refseq // 8 // Cross Hyb Matching Probes /// GENSCAN00000016704 // ensembl_prediction // 3 // Cross Hyb Matching Probes /// GENSCAN00000017502 // ensembl_prediction // 3 // Cross Hyb Matching Probes /// ENST00000338037 // ensembl_transcript // 8 // Cross Hyb Matching Probes /// ENST00000378637 // ensembl_transcript // 3 // Cross Hyb Matching Probes /// ENST00000330472 // ensembl_transcript // 3 // Cross Hyb Matching Probes /// ENST00000360925 // ensembl_transcript // 3 // Cross Hyb Matching Probes","_row":"15060"}
{"Probe.Set.ID":"207629_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4758671","Target.Description":"gb:NM_004723.1 /DEF=Homo sapiens rhorac guanine nucleotide exchange factor (GEF) 2 (ARHGEF2), mRNA.  /FEA=mRNA /GEN=ARHGEF2 /PROD=rhorac guanine nucleotide exchange factor (GEF)2 /DB_XREF=gi:4758671 /UG=Hs.155120 rhorac guanine nucleotide exchange factor (GEF) 2 /FL=gb:U72206.1 gb:NM_004723.1","Representative.Public.ID":"NM_004723","Archival.UniGene.Cluster":"Hs.155120","UniGene.ID":"Hs.568509","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:154183781-154214944 (-) // 98.4 // q22","Gene.Title":"rho/rac guanine nucleotide exchange factor (GEF) 2","Gene.Symbol":"ARHGEF2","Chromosomal.Location":"chr1q21-q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000116584","Entrez.Gene":"9181","SwissProt":"Q8TDA3 /// Q8WUG4 /// Q92974 /// Q9H023","EC":"---","OMIM":"607560","RefSeq.Protein.ID":"NP_004714.2","RefSeq.Transcript.ID":"NM_004723","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"902 // cellular morphogenesis // inferred from mutant phenotype /// 902 // cellular morphogenesis // inferred from sequence or structural similarity /// 6886 // intracellular protein transport // inferred from sequence or structural similarity /// 6886 // intracellular protein transport // non-traceable author statement /// 7015 // actin filament organization // inferred from mutant phenotype /// 7015 // actin filament organization // inferred from sequence or structural similarity /// 7026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 7026 // negative regulation of microtubule depolymerization // inferred from sequence or structural similarity /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 35023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 35023 // regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 35023 // regulation of Rho protein signal transduction // non-traceable author statement /// 42127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 42127 // regulation of cell proliferation // traceable author statement /// 7166 // cell surface receptor linked signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5622 // intracellular // inferred from electronic annotation /// 5874 // microtubule // inferred from direct assay /// 5874 // microtubule // inferred from sequence or structural similarity /// 15630 // microtubule cytoskeleton // traceable author statement","Gene.Ontology.Molecular.Function":"5089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 5089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5089 // Rho guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 8017 // microtubule binding // inferred from direct assay /// 8017 // microtubule binding // inferred from sequence or structural similarity /// 8270 // zinc ion binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from sequence or structural similarity /// 8270 // zinc ion binding // non-traceable author statement /// 17048 // Rho GTPase binding // inferred from direct assay /// 17048 // Rho GTPase binding // inferred from sequence or structural similarity /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 30676 // Rac guanyl-nucleotide exchange factor activity // inferred from direct assay /// 30676 // Rac guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 46872 // metal ion binding // inferred from electronic annotation /// 48365 // Rac GTPase binding // inferred from direct assay /// 48365 // Rac GTPase binding // inferred from sequence or structural similarity /// 5085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5085 // guanyl-nucleotide exchange factor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"scop // a.3.1.Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // All alpha proteins; Cytochrome c; Cytochrome c; Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // 0.990000009536743 /// scop // a.3.1.Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // All alpha proteins; Cytochrome c; Cytochrome c; Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // 1.10000002384186 /// scop // a.3.1.Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // All alpha proteins; Cytochrome c; Cytochrome c; Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // 0.889999985694885","InterPro":"IPR001849 // Pleckstrin-like // 1.4E-15 /// IPR000219 // DH domain // 3.0E-20 /// IPR001849 // Pleckstrin-like // 1.4E-15 /// IPR000219 // DH domain // 3.0E-20 /// IPR001849 // Pleckstrin-like // 1.4E-15 /// IPR000219 // DH domain // 3.0E-20","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL832538(11),BC020567(11),NM_004723(11)","Transcript.Assignments":"BC020567 // Homo sapiens rho/rac guanine nucleotide exchange factor (GEF) 2, mRNA (cDNA clone MGC:21557 IMAGE:4157775), complete cds. // gb // 11 // --- /// AL832538 // Homo sapiens mRNA; cDNA DKFZp547P1516 (from clone DKFZp547P1516). // gb // 11 // --- /// NM_004723 // Homo sapiens rho/rac guanine nucleotide exchange factor (GEF) 2 (ARHGEF2), mRNA. // refseq // 11 // --- /// ENST00000361247 // cdna:known chromosome:NCBI36:1:154183269:154214942:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000313695 // cdna:known-ccds chromosome:NCBI36:1:154183269:154214575:-1 gene:ENSG00000116584 CCDS1125.1 // ensembl_transcript // 11 // --- /// ENST00000368316 // cdna:known chromosome:NCBI36:1:154183270:154226488:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000368315 // cdna:known chromosome:NCBI36:1:154183270:154208757:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000356361 // cdna:known chromosome:NCBI36:1:154183309:154214942:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000368313 // cdna:known chromosome:NCBI36:1:154183309:154208735:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"7150"}
{"Probe.Set.ID":"209435_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12653008","Target.Description":"gb:BC000265.1 /DEF=Homo sapiens, clone MGC:3182, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:3182) /DB_XREF=gi:12653008 /UG=Hs.315417 Homo sapiens, clone MGC:3182, mRNA, complete cds /FL=gb:BC000265.1","Representative.Public.ID":"BC000265","Archival.UniGene.Cluster":"Hs.315417","UniGene.ID":"Hs.568509","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:154183269-154198215 (-) // 88.64 // q22","Gene.Title":"rho/rac guanine nucleotide exchange factor (GEF) 2","Gene.Symbol":"ARHGEF2","Chromosomal.Location":"chr1q21-q22","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000116584","Entrez.Gene":"9181","SwissProt":"Q8TDA3 /// Q8WUG4 /// Q92974 /// Q9H023","EC":"---","OMIM":"607560","RefSeq.Protein.ID":"NP_004714.2","RefSeq.Transcript.ID":"NM_004723","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"902 // cellular morphogenesis // inferred from mutant phenotype /// 902 // cellular morphogenesis // inferred from sequence or structural similarity /// 6886 // intracellular protein transport // inferred from sequence or structural similarity /// 6886 // intracellular protein transport // non-traceable author statement /// 7015 // actin filament organization // inferred from mutant phenotype /// 7015 // actin filament organization // inferred from sequence or structural similarity /// 7026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 7026 // negative regulation of microtubule depolymerization // inferred from sequence or structural similarity /// 7242 // intracellular signaling cascade // inferred from electronic annotation /// 35023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 35023 // regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 35023 // regulation of Rho protein signal transduction // non-traceable author statement /// 42127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 42127 // regulation of cell proliferation // traceable author statement /// 7166 // cell surface receptor linked signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5622 // intracellular // inferred from electronic annotation /// 5874 // microtubule // inferred from direct assay /// 5874 // microtubule // inferred from sequence or structural similarity /// 15630 // microtubule cytoskeleton // traceable author statement","Gene.Ontology.Molecular.Function":"5089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 5089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5089 // Rho guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 8017 // microtubule binding // inferred from direct assay /// 8017 // microtubule binding // inferred from sequence or structural similarity /// 8270 // zinc ion binding // inferred from electronic annotation /// 8270 // zinc ion binding // inferred from sequence or structural similarity /// 8270 // zinc ion binding // non-traceable author statement /// 17048 // Rho GTPase binding // inferred from direct assay /// 17048 // Rho GTPase binding // inferred from sequence or structural similarity /// 19992 // diacylglycerol binding // inferred from electronic annotation /// 30676 // Rac guanyl-nucleotide exchange factor activity // inferred from direct assay /// 30676 // Rac guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 46872 // metal ion binding // inferred from electronic annotation /// 48365 // Rac GTPase binding // inferred from direct assay /// 48365 // Rac GTPase binding // inferred from sequence or structural similarity /// 5085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 5085 // guanyl-nucleotide exchange factor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"scop // a.3.1.Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // All alpha proteins; Cytochrome c; Cytochrome c; Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // 0.990000009536743 /// scop // a.3.1.Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // All alpha proteins; Cytochrome c; Cytochrome c; Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // 1.10000002384186 /// scop // a.3.1.Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // All alpha proteins; Cytochrome c; Cytochrome c; Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 // 0.889999985694885","InterPro":"IPR001849 // Pleckstrin-like // 1.4E-15 /// IPR000219 // DH domain // 3.0E-20 /// IPR001849 // Pleckstrin-like // 1.4E-15 /// IPR000219 // DH domain // 3.0E-20 /// IPR001849 // Pleckstrin-like // 1.4E-15 /// IPR000219 // DH domain // 3.0E-20","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL832538(11),BC020567(11),BC027722(11),NM_004723(11)","Transcript.Assignments":"BC020567 // Homo sapiens rho/rac guanine nucleotide exchange factor (GEF) 2, mRNA (cDNA clone MGC:21557 IMAGE:4157775), complete cds. // gb // 11 // --- /// BC027722 // Homo sapiens, clone IMAGE:4636257, mRNA. // gb // 11 // --- /// AL832538 // Homo sapiens mRNA; cDNA DKFZp547P1516 (from clone DKFZp547P1516). // gb // 11 // --- /// NM_004723 // Homo sapiens rho/rac guanine nucleotide exchange factor (GEF) 2 (ARHGEF2), mRNA. // refseq // 11 // --- /// ENST00000361247 // cdna:known chromosome:NCBI36:1:154183269:154214942:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000313695 // cdna:known-ccds chromosome:NCBI36:1:154183269:154214575:-1 gene:ENSG00000116584 CCDS1125.1 // ensembl_transcript // 11 // --- /// ENST00000368316 // cdna:known chromosome:NCBI36:1:154183270:154226488:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000368315 // cdna:known chromosome:NCBI36:1:154183270:154208757:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000356361 // cdna:known chromosome:NCBI36:1:154183309:154214942:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // --- /// ENST00000368313 // cdna:known chromosome:NCBI36:1:154183309:154208735:-1 gene:ENSG00000116584 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000079261 // ensembl_est // 4 // Cross Hyb Matching Probes","_row":"8928"}
{"Probe.Set.ID":"209793_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.7117.1","Target.Description":"Consensus includes gb:AL567302 /FEA=EST /DB_XREF=gi:12920523 /DB_XREF=est:AL567302 /CLONE=CS0DF027YK04 (3 prime) /UG=Hs.7117 glutamate receptor, ionotropic, AMPA 1 /FL=gb:M81886.1 gb:NM_000827.2","Representative.Public.ID":"AL567302","Archival.UniGene.Cluster":"Hs.7117","UniGene.ID":"Hs.519693","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:152850498-153173622 (+) // 98.78 // q33.2","Gene.Title":"glutamate receptor, ionotropic, AMPA 1","Gene.Symbol":"GRIA1","Chromosomal.Location":"chr5q33|5q31.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000155511","Entrez.Gene":"2890","SwissProt":"P42261 /// Q2NKM6 /// Q59GL5","EC":"---","OMIM":"138248","RefSeq.Protein.ID":"NP_000818.1","RefSeq.Transcript.ID":"NM_000827","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation /// 45211 // postsynaptic membrane // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // not recorded /// 5215 // transporter activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5234 // glutamate-gated ion channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 15277 // kainate selective glutamate receptor activity // traceable author statement /// 4970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 8066 // glutamate receptor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000340 // Dual specificity protein phosphatase // 3.9E-22 /// IPR001320 // Ionotropic glutamate receptor // 1.0E-126 /// IPR001828 // Extracellular ligand-binding receptor // 2.7E-61 /// IPR001841 // Zn-finger, RING // 3.0E-16 /// IPR003877 // SPla/RYanodine receptor SPRY // 1.9E-23 /// IPR000315 // Zn-finger, B-box // 2.4E-15 /// IPR001664 // Intermediate filament protein // 2.3E-33 /// IPR001664 // Intermediate filament protein // 1.3E-33","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Genome Consensus/Exemplar Overlap based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Genome Consensus/Exemplar Overlap // C","Annotation.Transcript.Cluster":"NM_000827","Transcript.Assignments":"ENSESTT00000085070 // --- // ensembl_est // 0 // chr5:153010230-153065925(+) /// GENSCAN00000005085 // cdna:Genscan chromosome:NCBI36:5:152999569:153113777:1 // ensembl_prediction // 0 // chr5:152999568-153113777(+) /// ENST00000285900 // cdna:known-ccds chromosome:NCBI36:5:152850499:153171354:1 gene:ENSG00000155511 CCDS4322.1 // ensembl_transcript // 0 // chr5:152850498-153171354(+) /// NM_000827 // Homo sapiens glutamate receptor, ionotropic, AMPA 1 (GRIA1), mRNA. // refseq // 0 // chr5:152850498-153171354(+) /// GENSCAN00000030797 // cdna:Genscan chromosome:NCBI36:5:153124187:153170978:1 // ensembl_prediction // 0 // chr5:153124186-153170978(+) /// GENSCAN00000065150 // cdna:Genscan chromosome:NCBI36:5:152821391:152880123:1 // ensembl_prediction // 0 // chr5:152839482-152880123(+) /// ENST00000340592 // cdna:known chromosome:NCBI36:5:152850569:153171354:1 gene:ENSG00000155511 // ensembl_transcript // 0 // chr5:152850568-153171354(+) /// ENSESTT00000065878 // --- // ensembl_est // 0 // chr5:152850396-152854087(+) /// ENSESTT00000065879 // --- // ensembl_est // 0 // chr5:152853742-152885275(+)","Annotation.Notes":"---","_row":"9281.1"}
{"Probe.Set.ID":"211520_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g183280","Target.Description":"gb:M64752.1 /DEF=Human glutamate receptor subunit (GluH1) mRNA, complete cds. /FEA=mRNA /GEN=GluH1 /PROD=glutamate receptor subunit /DB_XREF=gi:183280 /UG=Hs.7117 glutamate receptor, ionotropic, AMPA 1 /FL=gb:M64752.1","Representative.Public.ID":"M64752","Archival.UniGene.Cluster":"Hs.7117","UniGene.ID":"Hs.519693","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:152850568-153171354 (+) // 99.53 // q33.2","Gene.Title":"glutamate receptor, ionotropic, AMPA 1","Gene.Symbol":"GRIA1","Chromosomal.Location":"chr5q33|5q31.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000155511","Entrez.Gene":"2890","SwissProt":"P42261 /// Q2NKM6 /// Q59GL5","EC":"---","OMIM":"138248","RefSeq.Protein.ID":"NP_000818.1","RefSeq.Transcript.ID":"NM_000827","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation /// 45211 // postsynaptic membrane // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // not recorded /// 5215 // transporter activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5234 // glutamate-gated ion channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 15277 // kainate selective glutamate receptor activity // traceable author statement /// 4970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 8066 // glutamate receptor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001320 // Ionotropic glutamate receptor // 1.0E-126 /// IPR001828 // Extracellular ligand-binding receptor // 2.7E-61","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000827(11)","Transcript.Assignments":"NM_000827 // Homo sapiens glutamate receptor, ionotropic, AMPA 1 (GRIA1), mRNA. // refseq // 11 // --- /// ENST00000285900 // cdna:known-ccds chromosome:NCBI36:5:152850499:153171354:1 gene:ENSG00000155511 CCDS4322.1 // ensembl_transcript // 11 // --- /// ENST00000340592 // cdna:known chromosome:NCBI36:5:152850569:153171354:1 gene:ENSG00000155511 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"10926.1"}
{"Probe.Set.ID":"215634_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.302185.0","Target.Description":"Consensus includes gb:AF007137.1 /DEF=Homo sapiens clone 23618 mRNA sequence. /FEA=mRNA /DB_XREF=gi:2852612 /UG=Hs.302185 Homo sapiens clone 23618 mRNA sequence","Representative.Public.ID":"AF007137","Archival.UniGene.Cluster":"Hs.302185","UniGene.ID":"Hs.519693","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr5:153146434-153147832 (+) // 73.13 // q33.2","Gene.Title":"Glutamate receptor, ionotropic, AMPA 1","Gene.Symbol":"GRIA1","Chromosomal.Location":"chr5q33|5q31.1","Unigene.Cluster.Type":"full length","Ensembl":"---","Entrez.Gene":"2890","SwissProt":"P42261 /// Q2NKM6 /// Q59GL5","EC":"---","OMIM":"138248","RefSeq.Protein.ID":"NP_000818.1","RefSeq.Transcript.ID":"NM_000827","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6811 // ion transport // inferred from electronic annotation /// 6813 // potassium ion transport // inferred from electronic annotation /// 7165 // signal transduction // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation /// 45211 // postsynaptic membrane // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // not recorded /// 5215 // transporter activity // inferred from electronic annotation /// 5216 // ion channel activity // inferred from electronic annotation /// 5234 // glutamate-gated ion channel activity // inferred from electronic annotation /// 5267 // potassium channel activity // inferred from electronic annotation /// 15277 // kainate selective glutamate receptor activity // traceable author statement /// 4970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 8066 // glutamate receptor activity // traceable author statement","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AF007137(11)","Transcript.Assignments":"AF007137 // Homo sapiens clone 23618 mRNA sequence. // gb // 11 // ---","Annotation.Notes":"---","_row":"15007.1"}
{"Probe.Set.ID":"201887_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4504646","Target.Description":"gb:NM_001560.1 /DEF=Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNA. /FEA=mRNA /GEN=IL13RA1 /PROD=interleukin 13 receptor, alpha 1 /DB_XREF=gi:4504646 /UG=Hs.285115 interleukin 13 receptor, alpha 1 /FL=gb:NM_001560.1 gb:U81379.3","Representative.Public.ID":"NM_001560","Archival.UniGene.Cluster":"Hs.285115","UniGene.ID":"Hs.496646","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:117745586-117812524 (+) // 90.81 // q24","Gene.Title":"interleukin 13 receptor, alpha 1","Gene.Symbol":"IL13RA1","Chromosomal.Location":"chrXq24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000131724","Entrez.Gene":"3597","SwissProt":"P78552 /// Q59EG2 /// Q6ZW70 /// Q96BB4 /// Q9UDY5","EC":"---","OMIM":"300119","RefSeq.Protein.ID":"NP_001551.1","RefSeq.Transcript.ID":"NM_001560","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7166 // cell surface receptor linked signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5898 // interleukin-13 receptor complex // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4896 // hematopoietin/interferon-class (D200-domain) cytokine receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001560(11)","Transcript.Assignments":"NM_001560 // Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNA. // refseq // 11 // --- /// ENST00000371666 // cdna:known-ccds chromosome:NCBI36:X:117745563:117812530:1 gene:ENSG00000131724 CCDS14573.1 // ensembl_transcript // 11 // --- /// ENST00000310242 // cdna:known chromosome:NCBI36:X:117745587:117812524:1 gene:ENSG00000131724 // ensembl_transcript // 11 // ---","Annotation.Notes":"BX538195 // gb // 1 // Cross Hyb Matching Probes /// CR749836 // gb // 1 // Negative Strand Matching Probes","_row":"1415"}
{"Probe.Set.ID":"201888_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5870850","Target.Description":"gb:U81379.3 /DEF=Homo sapiens interleukin-13 receptor mRNA, complete cds. /FEA=mRNA /PROD=interleukin-13 receptor /DB_XREF=gi:5870850 /UG=Hs.285115 interleukin 13 receptor, alpha 1 /FL=gb:NM_001560.1 gb:U81379.3","Representative.Public.ID":"U81379","Archival.UniGene.Cluster":"Hs.285115","UniGene.ID":"Hs.496646","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:117745592-117810226 (+) // 98.13 // q24","Gene.Title":"interleukin 13 receptor, alpha 1","Gene.Symbol":"IL13RA1","Chromosomal.Location":"chrXq24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000131724","Entrez.Gene":"3597","SwissProt":"P78552 /// Q59EG2 /// Q6ZW70 /// Q96BB4 /// Q9UDY5","EC":"---","OMIM":"300119","RefSeq.Protein.ID":"NP_001551.1","RefSeq.Transcript.ID":"NM_001560","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7166 // cell surface receptor linked signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5898 // interleukin-13 receptor complex // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4896 // hematopoietin/interferon-class (D200-domain) cytokine receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001560(11)","Transcript.Assignments":"AK123515 // Homo sapiens cDNA FLJ41521 fis, clone BRTHA2012980, moderately similar to INTERLEUKIN-13 RECEPTOR ALPHA-1 CHAIN PRECURSOR (IL-13R-ALPHA-1) (IL- 13RA-1). // gb // 11 // --- /// NM_001560 // Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNA. // refseq // 11 // --- /// ENST00000371666 // cdna:known-ccds chromosome:NCBI36:X:117745563:117812530:1 gene:ENSG00000131724 CCDS14573.1 // ensembl_transcript // 11 // --- /// ENST00000310242 // cdna:known chromosome:NCBI36:X:117745587:117812524:1 gene:ENSG00000131724 // ensembl_transcript // 11 // --- /// ENST00000371637 // cdna:known chromosome:NCBI36:X:117787647:117810352:1 gene:ENSG00000131724 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"1416"}
{"Probe.Set.ID":"210904_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5174767","Target.Description":"gb:U81380.2 /DEF=Human interleukin-13 receptor soluble form mRNA, complete cds. /FEA=mRNA /PROD=interleukin-13 receptor soluble form /DB_XREF=gi:5174767 /UG=Hs.285115 interleukin 13 receptor, alpha 1 /FL=gb:U81380.2","Representative.Public.ID":"U81380","Archival.UniGene.Cluster":"Hs.285115","UniGene.ID":"Hs.496646","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:117745592-117779510 (+) // 97.18 // q24","Gene.Title":"interleukin 13 receptor, alpha 1","Gene.Symbol":"IL13RA1","Chromosomal.Location":"chrXq24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000131724","Entrez.Gene":"3597","SwissProt":"P78552 /// Q59EG2 /// Q6ZW70 /// Q96BB4 /// Q9UDY5","EC":"---","OMIM":"300119","RefSeq.Protein.ID":"NP_001551.1","RefSeq.Transcript.ID":"NM_001560","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7166 // cell surface receptor linked signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5898 // interleukin-13 receptor complex // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4896 // hematopoietin/interferon-class (D200-domain) cytokine receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001560(11),U81380(11)","Transcript.Assignments":"ENSESTT00000068931 // --- // ensembl_est // 11 // --- /// ENSESTT00000068933 // --- // ensembl_est // 11 // --- /// CR603161 // full-length cDNA clone CS0DI001YN10 of Placenta Cot 25-normalized of Homo sapiens (human). // gb // 11 // --- /// U62858 // Human interleukin-13 receptor mRNA, complete cds. // gb // 11 // --- /// U81380 // Human interleukin-13 receptor soluble form mRNA, complete cds. // gb // 11 // --- /// NM_001560 // Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNA. // refseq // 11 // --- /// ENST00000371666 // cdna:known-ccds chromosome:NCBI36:X:117745563:117812530:1 gene:ENSG00000131724 CCDS14573.1 // ensembl_transcript // 11 // --- /// ENST00000310242 // cdna:known chromosome:NCBI36:X:117745587:117812524:1 gene:ENSG00000131724 // ensembl_transcript // 11 // --- /// ENST00000371642 // cdna:known chromosome:NCBI36:X:117745593:117779511:1 gene:ENSG00000131724 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000036282 // ensembl_prediction // 7 // Cross Hyb Matching Probes","_row":"10351"}
{"Probe.Set.ID":"211612_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1695875","Target.Description":"gb:U62858.1 /DEF=Human interleukin-13 receptor mRNA, complete cds. /FEA=mRNA /PROD=interleukin-13 receptor /DB_XREF=gi:1695875 /FL=gb:U62858.1","Representative.Public.ID":"U62858","Archival.UniGene.Cluster":"--- /// Hs.900345","UniGene.ID":"Hs.496646","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:117745598-117809999 (+) // 91.6 // q24","Gene.Title":"interleukin 13 receptor, alpha 1 /// interleukin 13 receptor, alpha 1","Gene.Symbol":"IL13RA1","Chromosomal.Location":"chrXq24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000131724","Entrez.Gene":"3597","SwissProt":"P78552 /// Q59EG2 /// Q6ZW70 /// Q96BB4 /// Q9UDY5","EC":"---","OMIM":"300119","RefSeq.Protein.ID":"NP_001551.1","RefSeq.Transcript.ID":"NM_001560","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7166 // cell surface receptor linked signal transduction // traceable author statement","Gene.Ontology.Cellular.Component":"5886 // plasma membrane // traceable author statement /// 5898 // interleukin-13 receptor complex // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation /// 4896 // hematopoietin/interferon-class (D200-domain) cytokine receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001560(11)","Transcript.Assignments":"ENSESTT00000068931 // --- // ensembl_est // 9 // --- /// ENSESTT00000068933 // --- // ensembl_est // 9 // --- /// AK123515 // Homo sapiens cDNA FLJ41521 fis, clone BRTHA2012980, moderately similar to INTERLEUKIN-13 RECEPTOR ALPHA-1 CHAIN PRECURSOR (IL-13R-ALPHA-1) (IL- 13RA-1). // gb // 11 // --- /// U62858 // Human interleukin-13 receptor mRNA, complete cds. // gb // 11 // --- /// NM_001560 // Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNA. // refseq // 11 // --- /// ENST00000371666 // cdna:known-ccds chromosome:NCBI36:X:117745563:117812530:1 gene:ENSG00000131724 CCDS14573.1 // ensembl_transcript // 11 // --- /// ENST00000310242 // cdna:known chromosome:NCBI36:X:117745587:117812524:1 gene:ENSG00000131724 // ensembl_transcript // 11 // --- /// ENST00000371637 // cdna:known chromosome:NCBI36:X:117787647:117810352:1 gene:ENSG00000131724 // ensembl_transcript // 11 // ---","Annotation.Notes":"CR603161 // gb // 5 // Cross Hyb Matching Probes /// GENSCAN00000036283 // ensembl_prediction // 6 // Cross Hyb Matching Probes","_row":"11017"}
{"Probe.Set.ID":"209257_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.24485.0","Target.Description":"Consensus includes gb:BF795297 /FEA=EST /DB_XREF=gi:12100351 /DB_XREF=est:602256270F1 /CLONE=IMAGE:4339721 /UG=Hs.24485 chondroitin sulfate proteoglycan 6 (bamacan) /FL=gb:AF020043.1 gb:NM_005445.1 gb:AF067163.1","Representative.Public.ID":"BF795297","Archival.UniGene.Cluster":"Hs.24485","UniGene.ID":"Hs.24485","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:112317438-112354382 (+) // 98.87 // q25.2","Gene.Title":"chondroitin sulfate proteoglycan 6 (bamacan)","Gene.Symbol":"CSPG6","Chromosomal.Location":"chr10q25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000108055","Entrez.Gene":"9126","SwissProt":"Q86VX4 /// Q9UQE7","EC":"---","OMIM":"606062","RefSeq.Protein.ID":"NP_005436.1","RefSeq.Transcript.ID":"NM_005445","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6281 // DNA repair // inferred from electronic annotation /// 7001 // chromosome organization and biogenesis (sensu Eukaryota) // traceable author statement /// 7049 // cell cycle // inferred from electronic annotation /// 7052 // mitotic spindle organization and biogenesis // inferred from expression pattern /// 7062 // sister chromatid cohesion // non-traceable author statement /// 7126 // meiosis // inferred from direct assay /// 7165 // signal transduction // inferred from direct assay /// 9294 // DNA mediated transformation // traceable author statement /// 51301 // cell division // inferred from electronic annotation /// 51276 // chromosome organization and biogenesis // inferred from electronic annotation /// 6974 // response to DNA damage stimulus // inferred from electronic annotation /// 7059 // chromosome segregation // inferred from electronic annotation /// 7067 // mitosis // inferred from electronic annotation /// 7126 // meiosis // inferred from electronic annotation /// 7067 // mitosis // traceable author statement","Gene.Ontology.Cellular.Component":"228 // nuclear chromosome // not recorded /// 922 // spindle pole // inferred from direct assay /// 5604 // basement membrane // traceable author statement /// 5737 // cytoplasm // inferred from direct assay /// 8278 // cohesin complex // non-traceable author statement /// 16363 // nuclear matrix // inferred from direct assay /// 5694 // chromosome // inferred from electronic annotation /// 5634 // nucleus // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 3777 // microtubule motor activity // non-traceable author statement /// 5524 // ATP binding // inferred from electronic annotation /// 16887 // ATPase activity // inferred from electronic annotation /// 45502 // dynein binding // inferred from direct assay /// 46982 // protein heterodimerization activity // inferred from physical interaction /// 5515 // protein binding // inferred from physical interaction /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.2E-67 /// --- // --- // 1.2E-38 /// --- // --- // 3.7E-7 /// --- // --- // 2.2E-19 /// --- // --- // 1.8E-61 /// --- // --- // 1.2E-38 /// --- // --- // 3.7E-7 /// --- // --- // 2.2E-19 /// IPR003395 // SMC protein, N-terminal // 1.2E-67 /// IPR010935 // SMCs flexible hinge // 1.2E-38 /// IPR003405 // Structural maintenance of chromosome protein SMC, C-terminal // 3.7E-7 /// IPR003405 // Structural maintenance of chromosome protein SMC, C-terminal // 2.2E-19","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005445(11)","Transcript.Assignments":"NM_005445 // Homo sapiens chondroitin sulfate proteoglycan 6 (bamacan) (CSPG6), mRNA. // refseq // 11 // --- /// GENSCAN00000033613 // cdna:Genscan chromosome:NCBI36:10:112317039:112346321:1 // ensembl_prediction // 11 // --- /// ENST00000361804 // cdna:known chromosome:NCBI36:10:112317439:112354384:1 gene:ENSG00000108055 // ensembl_transcript // 11 // --- /// ENST00000357608 // cdna:novel chromosome:NCBI36:10:112317439:112354380:1 gene:ENSG00000108055 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"8751"}
{"Probe.Set.ID":"209258_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.24485.0","Target.Description":"Consensus includes gb:AI373676 /FEA=EST /DB_XREF=gi:4153542 /DB_XREF=est:qz53h11.x1 /CLONE=IMAGE:2030661 /UG=Hs.24485 chondroitin sulfate proteoglycan 6 (bamacan) /FL=gb:AF020043.1 gb:NM_005445.1 gb:AF067163.1","Representative.Public.ID":"AI373676","Archival.UniGene.Cluster":"Hs.24485","UniGene.ID":"Hs.24485","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:112317438-112354382 (+) // 98.87 // q25.2","Gene.Title":"chondroitin sulfate proteoglycan 6 (bamacan)","Gene.Symbol":"CSPG6","Chromosomal.Location":"chr10q25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000108055","Entrez.Gene":"9126","SwissProt":"Q86VX4 /// Q9UQE7","EC":"---","OMIM":"606062","RefSeq.Protein.ID":"NP_005436.1","RefSeq.Transcript.ID":"NM_005445","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6281 // DNA repair // inferred from electronic annotation /// 7001 // chromosome organization and biogenesis (sensu Eukaryota) // traceable author statement /// 7049 // cell cycle // inferred from electronic annotation /// 7052 // mitotic spindle organization and biogenesis // inferred from expression pattern /// 7062 // sister chromatid cohesion // non-traceable author statement /// 7126 // meiosis // inferred from direct assay /// 7165 // signal transduction // inferred from direct assay /// 9294 // DNA mediated transformation // traceable author statement /// 51301 // cell division // inferred from electronic annotation /// 51276 // chromosome organization and biogenesis // inferred from electronic annotation /// 6974 // response to DNA damage stimulus // inferred from electronic annotation /// 7059 // chromosome segregation // inferred from electronic annotation /// 7067 // mitosis // inferred from electronic annotation /// 7126 // meiosis // inferred from electronic annotation /// 7067 // mitosis // traceable author statement","Gene.Ontology.Cellular.Component":"228 // nuclear chromosome // not recorded /// 922 // spindle pole // inferred from direct assay /// 5604 // basement membrane // traceable author statement /// 5737 // cytoplasm // inferred from direct assay /// 8278 // cohesin complex // non-traceable author statement /// 16363 // nuclear matrix // inferred from direct assay /// 5694 // chromosome // inferred from electronic annotation /// 5634 // nucleus // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 3777 // microtubule motor activity // non-traceable author statement /// 5524 // ATP binding // inferred from electronic annotation /// 16887 // ATPase activity // inferred from electronic annotation /// 45502 // dynein binding // inferred from direct assay /// 46982 // protein heterodimerization activity // inferred from physical interaction /// 5515 // protein binding // inferred from physical interaction /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.2E-67 /// --- // --- // 1.2E-38 /// --- // --- // 3.7E-7 /// --- // --- // 2.2E-19 /// --- // --- // 1.8E-61 /// --- // --- // 1.2E-38 /// --- // --- // 3.7E-7 /// --- // --- // 2.2E-19 /// IPR003395 // SMC protein, N-terminal // 1.2E-67 /// IPR010935 // SMCs flexible hinge // 1.2E-38 /// IPR003405 // Structural maintenance of chromosome protein SMC, C-terminal // 3.7E-7 /// IPR003405 // Structural maintenance of chromosome protein SMC, C-terminal // 2.2E-19","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005445(11)","Transcript.Assignments":"ENSESTT00000055334 // --- // ensembl_est // 9 // --- /// NM_005445 // Homo sapiens chondroitin sulfate proteoglycan 6 (bamacan) (CSPG6), mRNA. // refseq // 11 // --- /// GENSCAN00000033613 // cdna:Genscan chromosome:NCBI36:10:112317039:112346321:1 // ensembl_prediction // 11 // --- /// ENST00000361804 // cdna:known chromosome:NCBI36:10:112317439:112354384:1 gene:ENSG00000108055 // ensembl_transcript // 11 // --- /// ENST00000357608 // cdna:novel chromosome:NCBI36:10:112317439:112354380:1 gene:ENSG00000108055 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"8752"}
{"Probe.Set.ID":"209259_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g3089367","Target.Description":"gb:AF020043.1 /DEF=Homo sapiens chromosome-associated polypeptide (HCAP) mRNA, complete cds.  /FEA=mRNA /GEN=HCAP /PROD=chromosome-associated polypeptide /DB_XREF=gi:3089367 /UG=Hs.24485 chondroitin sulfate proteoglycan 6 (bamacan) /FL=gb:AF020043.1 gb:NM_005445.1 gb:AF067163.1","Representative.Public.ID":"AF020043","Archival.UniGene.Cluster":"Hs.24485","UniGene.ID":"Hs.24485","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr10:112317473-112354380 (+) // 99.44 // q25.2","Gene.Title":"chondroitin sulfate proteoglycan 6 (bamacan)","Gene.Symbol":"CSPG6","Chromosomal.Location":"chr10q25","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000108055","Entrez.Gene":"9126","SwissProt":"Q86VX4 /// Q9UQE7","EC":"---","OMIM":"606062","RefSeq.Protein.ID":"NP_005436.1","RefSeq.Transcript.ID":"NM_005445","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6281 // DNA repair // inferred from electronic annotation /// 7001 // chromosome organization and biogenesis (sensu Eukaryota) // traceable author statement /// 7049 // cell cycle // inferred from electronic annotation /// 7052 // mitotic spindle organization and biogenesis // inferred from expression pattern /// 7062 // sister chromatid cohesion // non-traceable author statement /// 7126 // meiosis // inferred from direct assay /// 7165 // signal transduction // inferred from direct assay /// 9294 // DNA mediated transformation // traceable author statement /// 51301 // cell division // inferred from electronic annotation /// 51276 // chromosome organization and biogenesis // inferred from electronic annotation /// 6974 // response to DNA damage stimulus // inferred from electronic annotation /// 7059 // chromosome segregation // inferred from electronic annotation /// 7067 // mitosis // inferred from electronic annotation /// 7126 // meiosis // inferred from electronic annotation /// 7067 // mitosis // traceable author statement","Gene.Ontology.Cellular.Component":"228 // nuclear chromosome // not recorded /// 922 // spindle pole // inferred from direct assay /// 5604 // basement membrane // traceable author statement /// 5737 // cytoplasm // inferred from direct assay /// 8278 // cohesin complex // non-traceable author statement /// 16363 // nuclear matrix // inferred from direct assay /// 5694 // chromosome // inferred from electronic annotation /// 5634 // nucleus // inferred from electronic annotation /// 5634 // nucleus // traceable author statement","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 3777 // microtubule motor activity // non-traceable author statement /// 5524 // ATP binding // inferred from electronic annotation /// 16887 // ATPase activity // inferred from electronic annotation /// 45502 // dynein binding // inferred from direct assay /// 46982 // protein heterodimerization activity // inferred from physical interaction /// 5515 // protein binding // inferred from physical interaction /// 5515 // protein binding // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 1.2E-67 /// --- // --- // 1.2E-38 /// --- // --- // 3.7E-7 /// --- // --- // 2.2E-19 /// --- // --- // 1.8E-61 /// --- // --- // 1.2E-38 /// --- // --- // 3.7E-7 /// --- // --- // 2.2E-19 /// IPR003395 // SMC protein, N-terminal // 1.2E-67 /// IPR010935 // SMCs flexible hinge // 1.2E-38 /// IPR003405 // Structural maintenance of chromosome protein SMC, C-terminal // 3.7E-7 /// IPR003405 // Structural maintenance of chromosome protein SMC, C-terminal // 2.2E-19","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005445(11)","Transcript.Assignments":"ENSESTT00000055340 // --- // ensembl_est // 11 // --- /// NM_005445 // Homo sapiens chondroitin sulfate proteoglycan 6 (bamacan) (CSPG6), mRNA. // refseq // 11 // --- /// ENST00000361804 // cdna:known chromosome:NCBI36:10:112317439:112354384:1 gene:ENSG00000108055 // ensembl_transcript // 11 // --- /// ENST00000357608 // cdna:novel chromosome:NCBI36:10:112317439:112354380:1 gene:ENSG00000108055 // ensembl_transcript // 11 // ---","Annotation.Notes":"GENSCAN00000033610 // ensembl_prediction // 6 // Cross Hyb Matching Probes /// GENSCAN00000003501 // ensembl_prediction // 6 // Cross Hyb Matching Probes","_row":"8753"}
{"Probe.Set.ID":"217975_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g10047099","Target.Description":"gb:NM_016303.1 /DEF=Homo sapiens pp21 homolog (LOC51186), mRNA. /FEA=mRNA /GEN=LOC51186 /PROD=pp21 homolog /DB_XREF=gi:10047099 /UG=Hs.15984 pp21 homolog /FL=gb:NM_016303.1 gb:AF125535.1","Representative.Public.ID":"NM_016303","Archival.UniGene.Cluster":"Hs.15984","UniGene.ID":"Hs.533287","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chrX:102498078-102500037 (+) // 68.21 // q22.1","Gene.Title":"WW domain binding protein 5","Gene.Symbol":"WBP5","Chromosomal.Location":"chrXq22.1-q22.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000185222","Entrez.Gene":"51186","SwissProt":"Q9UHQ7","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_001006613.1 /// NP_001006614.1 /// NP_001006615.1 /// NP_057387.1","RefSeq.Transcript.ID":"NM_001006612 /// NM_001006613 /// NM_001006614 /// NM_016303","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR010370 // Transcription elongation factor A, SII-related // 4.5E-10 /// IPR010370 // Transcription elongation factor A, SII-related // 1.5E-41 /// IPR010370 // Transcription elongation factor A, SII-related // 9.3E-18","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"AL833152(10),NM_001006612(10),NM_001006613(10),NM_001006614(10),NM_016303(10)","Transcript.Assignments":"ENSESTT00000072403 // --- // ensembl_est // 10 // --- /// BC007006 // Homo sapiens cDNA clone IMAGE:3997235, complete cds. // gb // 10 // --- /// AL833152 // Homo sapiens mRNA; cDNA DKFZp313K1940 (from clone DKFZp313K1940). // gb // 10 // --- /// NM_001006614 // Homo sapiens WW domain binding protein 5 (WBP5), transcript variant 4, mRNA. // refseq // 10 // --- /// NM_001006612 // Homo sapiens WW domain binding protein 5 (WBP5), transcript variant 2, mRNA. // refseq // 10 // --- /// NM_001006613 // Homo sapiens WW domain binding protein 5 (WBP5), transcript variant 3, mRNA. // refseq // 10 // --- /// NM_016303 // Homo sapiens WW domain binding protein 5 (WBP5), transcript variant 1, mRNA. // refseq // 10 // --- /// ENST00000372661 // cdna:known-ccds chromosome:NCBI36:X:102498029:102500053:1 gene:ENSG00000185222 CCDS14507.1 // ensembl_transcript // 10 // --- /// ENST00000328647 // cdna:known chromosome:NCBI36:X:102498036:102500035:1 gene:ENSG00000185222 // ensembl_transcript // 10 // --- /// ENST00000372656 // cdna:known chromosome:NCBI36:X:102498036:102499964:1 gene:ENSG00000185222 // ensembl_transcript // 9 // ---","Annotation.Notes":"---","_row":"17340"}
{"Probe.Set.ID":"207583_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g9945307","Target.Description":"gb:NM_005164.1 /DEF=Homo sapiens ATP-binding cassette, sub-family D (ALD), member 2 (ABCD2), mRNA.  /FEA=mRNA /GEN=ABCD2 /PROD=ATP-binding cassette, sub-family D, member 2 /DB_XREF=gi:9945307 /UG=Hs.117852 ATP-binding cassette, sub-family D (ALD), member 2 /FL=gb:NM_005164.1","Representative.Public.ID":"NM_005164","Archival.UniGene.Cluster":"Hs.117852","UniGene.ID":"Hs.591042","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr12:38232813-38300237 (-) // 94.05 // q12","Gene.Title":"ATP-binding cassette, sub-family D (ALD), member 2","Gene.Symbol":"ABCD2","Chromosomal.Location":"chr12q11-q12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000173208","Entrez.Gene":"225","SwissProt":"Q2M3H9 /// Q9UBJ2","EC":"---","OMIM":"601081","RefSeq.Protein.ID":"NP_005155.1","RefSeq.Transcript.ID":"NM_005164","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6631 // fatty acid metabolism // traceable author statement /// 6810 // transport // traceable author statement /// 6810 // transport // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5777 // peroxisome // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 43190 // ATP-binding cassette (ABC) transporter complex // traceable author statement /// 16021 // integral to membrane // inferred from electronic annotation /// 5777 // peroxisome // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"166 // nucleotide binding // inferred from electronic annotation /// 5515 // protein binding // inferred from physical interaction /// 5524 // ATP binding // traceable author statement /// 16887 // ATPase activity // inferred from electronic annotation /// 42626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 17111 // nucleoside-triphosphatase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR003439 // ABC transporter // 8.0E-42 /// IPR010509 // ABC transporter, N-terminal // 1.5E-43","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_005164(11)","Transcript.Assignments":"NM_005164 // Homo sapiens ATP-binding cassette, sub-family D (ALD), member 2 (ABCD2), mRNA. // refseq // 11 // --- /// ENST00000308666 // cdna:known-ccds chromosome:NCBI36:12:38232814:38300237:-1 gene:ENSG00000173208 CCDS8734.1 // ensembl_transcript // 10 // ---","Annotation.Notes":"---","_row":"7104"}
{"Probe.Set.ID":"209029_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g6120134","Target.Description":"gb:AF193844.1 /DEF=Homo sapiens COP9 complex subunit 7a mRNA, complete cds. /FEA=mRNA /PROD=COP9 complex subunit 7a /DB_XREF=gi:6120134 /UG=Hs.3758 COP9 complex subunit 7a /FL=gb:AB033603.1 gb:AF193844.1 gb:AF210052.1 gb:NM_016319.1","Representative.Public.ID":"AF193844","Archival.UniGene.Cluster":"Hs.3758","UniGene.ID":"Hs.530823","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr12:6704083-6711250 (+) // 99.69 // p13.31","Gene.Title":"COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)","Gene.Symbol":"COPS7A","Chromosomal.Location":"chr12p13.31","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000111652","Entrez.Gene":"50813","SwissProt":"Q567U8 /// Q9UBW8","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_057403.1","RefSeq.Transcript.ID":"NM_016319","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"8180 // signalosome complex // inferred from electronic annotation /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000717 // Proteasome component region PCI // 2.6E-18","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"CR592602(10),CR605577(10),NM_016319(10)","Transcript.Assignments":"ENSESTT00000098288 // --- // ensembl_est // 10 // --- /// ENSESTT00000098290 // --- // ensembl_est // 10 // --- /// ENSESTT00000098292 // --- // ensembl_est // 10 // --- /// CR592602 // full-length cDNA clone CS0DF037YF09 of Fetal brain of Homo sapiens (human). // gb // 10 // --- /// CR605577 // full-length cDNA clone CS0DA002YH18 of Neuroblastoma of Homo sapiens (human). // gb // 10 // --- /// NM_016319 // Homo sapiens COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) (COPS7A), mRNA. // refseq // 10 // --- /// ENST00000229251 // cdna:known-ccds chromosome:NCBI36:12:6703473:6711283:1 gene:ENSG00000111652 CCDS8558.1 // ensembl_transcript // 10 // ---","Annotation.Notes":"---","_row":"8523"}
{"Probe.Set.ID":"217816_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g9966826","Target.Description":"gb:NM_020357.1 /DEF=Homo sapiens PEST-containing nuclear protein (pcnp), mRNA. /FEA=mRNA /GEN=pcnp /PROD=PEST-containing nuclear protein /DB_XREF=gi:9966826 /UG=Hs.283728 PEST-containing nuclear protein /FL=gb:AB037675.1 gb:NM_020357.1","Representative.Public.ID":"NM_020357","Archival.UniGene.Cluster":"Hs.283728","UniGene.ID":"Hs.275865","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:102775731-102795969 (+) // 99.38 // q12.3 /// chr12:110589119-110592566 (-) // 90.62 // q24.12 /// chr13:47798516-47800711 (-) // 88.98 // q14.2","Gene.Title":"PEST proteolytic signal containing nuclear protein","Gene.Symbol":"PCNP","Chromosomal.Location":"chr3q12.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000081154","Entrez.Gene":"57092","SwissProt":"Q53GF3 /// Q8WW12","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_065090.1","RefSeq.Transcript.ID":"NM_020357","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7049 // cell cycle // inferred from electronic annotation","Gene.Ontology.Cellular.Component":"5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BX647886(11),NM_020357(11)","Transcript.Assignments":"BX647886 // Homo sapiens mRNA; cDNA DKFZp686G21102 (from clone DKFZp686G21102). // gb // 11 // --- /// NM_020357 // Homo sapiens PEST proteolytic signal containing nuclear protein (PCNP), mRNA. // refseq // 11 // --- /// ENST00000265260 // cdna:known-ccds chromosome:NCBI36:3:102775730:102795969:1 gene:ENSG00000081154 CCDS2942.1 // ensembl_transcript // 11 // --- /// ENST00000296024 // cdna:novel chromosome:NCBI36:3:102775730:102795969:1 gene:ENSG00000081154 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"17181"}
{"Probe.Set.ID":"207391_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4505814","Target.Description":"gb:NM_003557.1 /DEF=Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, alpha (PIP5K1A), mRNA.  /FEA=mRNA /GEN=PIP5K1A /PROD=phosphatidylinositol-4-phosphate 5-kinase, typeI, alpha /DB_XREF=gi:4505814 /UG=Hs.149255 phosphatidylinositol-4-phosphate 5-kinase, type I, alpha /FL=gb:U78575.1 gb:NM_003557.1","Representative.Public.ID":"NM_003557","Archival.UniGene.Cluster":"Hs.149255","UniGene.ID":"Hs.546316","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:149437695-149488629 (+) // 99.97 // q21.2 /// chr6:7931391-7935095 (+) // 90.25 // p24.3 /// chr10:95709661-95711648 (-) // 51.74 // q23.33","Gene.Title":"phosphatidylinositol-4-phosphate 5-kinase, type I, alpha","Gene.Symbol":"PIP5K1A","Chromosomal.Location":"chr1q22-q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000143398","Entrez.Gene":"8394","SwissProt":"P78517 /// Q99755","EC":"---","OMIM":"603275","RefSeq.Protein.ID":"NP_003548.1","RefSeq.Transcript.ID":"NM_003557","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"5795 // Golgi stack // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"16301 // kinase activity // inferred from electronic annotation /// 16308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002498 // Phosphatidylinositol-4-phosphate 5-kinase // 1.0E-126 /// IPR002498 // Phosphatidylinositol-4-phosphate 5-kinase // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC007005(10),NM_003557(11)","Transcript.Assignments":"BC007005 // Homo sapiens, clone IMAGE:3680651, mRNA. // gb // 10 // --- /// NM_003557 // Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, alpha (PIP5K1A), mRNA. // refseq // 11 // --- /// ENST00000349792 // cdna:known-ccds chromosome:NCBI36:1:149437651:149488636:1 gene:ENSG00000143398 CCDS990.1 // ensembl_transcript // 11 // --- /// ENST00000368890 // cdna:novel chromosome:NCBI36:1:149437653:149488631:1 gene:ENSG00000143398 // ensembl_transcript // 11 // --- /// ENST00000368889 // cdna:novel chromosome:NCBI36:1:149437653:149488628:1 gene:ENSG00000143398 // ensembl_transcript // 11 // --- /// ENST00000355825 // cdna:known chromosome:NCBI36:1:149437696:149488629:1 gene:ENSG00000143398 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000054090 // ensembl_est // 4 // Cross Hyb Matching Probes /// BC028580 // gb // 4 // Cross Hyb Matching Probes /// ENST00000309390 // ensembl_transcript // 4 // Cross Hyb Matching Probes","_row":"6914"}
{"Probe.Set.ID":"210256_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1743872","Target.Description":"gb:U78576.1 /DEF=Human 68 kDa type I phosphatidylinositol-4-phosphate 5-kinase alpha mRNA, clone PIP5KIa2, complete cds.  /FEA=mRNA /PROD=68 kDa type I phosphatidylinositol-4-phosphate5-kinase alpha /DB_XREF=gi:1743872 /UG=Hs.149255 phosphatidylinositol-4-phosphate 5-kinase, type I, alpha /FL=gb:U78576.1","Representative.Public.ID":"U78576","Archival.UniGene.Cluster":"Hs.149255","UniGene.ID":"Hs.546316","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:149437674-149486988 (+) // 100.0 // q21.2 /// chr10:95709661-95711662 (-) // 90.72 // q23.33","Gene.Title":"phosphatidylinositol-4-phosphate 5-kinase, type I, alpha","Gene.Symbol":"PIP5K1A","Chromosomal.Location":"chr1q22-q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000143398","Entrez.Gene":"8394","SwissProt":"P78517 /// Q99755","EC":"---","OMIM":"603275","RefSeq.Protein.ID":"NP_003548.1","RefSeq.Transcript.ID":"NM_003557","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"5795 // Golgi stack // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"16301 // kinase activity // inferred from electronic annotation /// 16308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002498 // Phosphatidylinositol-4-phosphate 5-kinase // 1.0E-126 /// IPR002498 // Phosphatidylinositol-4-phosphate 5-kinase // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003557(11)","Transcript.Assignments":"ENSESTT00000054090 // --- // ensembl_est // 11 // --- /// NM_003557 // Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, alpha (PIP5K1A), mRNA. // refseq // 11 // --- /// ENST00000349792 // cdna:known-ccds chromosome:NCBI36:1:149437651:149488636:1 gene:ENSG00000143398 CCDS990.1 // ensembl_transcript // 11 // --- /// ENST00000368888 // cdna:known chromosome:NCBI36:1:149437675:149486988:1 gene:ENSG00000143398 // ensembl_transcript // 11 // --- /// ENST00000271665 // cdna:known chromosome:NCBI36:1:149437675:149486988:1 gene:ENSG00000143398 // ensembl_transcript // 11 // --- /// ENST00000355825 // cdna:known chromosome:NCBI36:1:149437696:149488629:1 gene:ENSG00000143398 // ensembl_transcript // 11 // ---","Annotation.Notes":"BC028580 // gb // 3 // Cross Hyb Matching Probes /// XR_000874 // refseq // 3 // Cross Hyb Matching Probes /// XM_938649 // refseq // 3 // Cross Hyb Matching Probes /// GENSCAN00000058378 // ensembl_prediction // 2 // Cross Hyb Matching Probes /// ENST00000340582 // ensembl_transcript // 3 // Cross Hyb Matching Probes /// ENST00000309390 // ensembl_transcript // 3 // Cross Hyb Matching Probes","_row":"9736"}
{"Probe.Set.ID":"211205_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1743874","Target.Description":"gb:U78577.1 /DEF=Human 68 kDa type I phosphatidylinositol-4-phosphate 5-kinase alpha mRNA, clone PIP5KIa3, complete cds.  /FEA=mRNA /PROD=68 kDa type I phosphatidylinositol-4-phosphate5-kinase alpha /DB_XREF=gi:1743874 /UG=Hs.149255 phosphatidylinositol-4-phosphate 5-kinase, type I, alpha /FL=gb:U78577.1","Representative.Public.ID":"U78577","Archival.UniGene.Cluster":"Hs.149255","UniGene.ID":"Hs.546316","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:149437694-149487071 (+) // 100.0 // q21.2 /// chr10:95709661-95711649 (-) // 88.56 // q23.33","Gene.Title":"phosphatidylinositol-4-phosphate 5-kinase, type I, alpha","Gene.Symbol":"PIP5K1A","Chromosomal.Location":"chr1q22-q24","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000143398","Entrez.Gene":"8394","SwissProt":"P78517 /// Q99755","EC":"---","OMIM":"603275","RefSeq.Protein.ID":"NP_003548.1","RefSeq.Transcript.ID":"NM_003557","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"5795 // Golgi stack // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"16301 // kinase activity // inferred from electronic annotation /// 16308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002498 // Phosphatidylinositol-4-phosphate 5-kinase // 1.0E-126 /// IPR002498 // Phosphatidylinositol-4-phosphate 5-kinase // 1.0E-126","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_003557(10)","Transcript.Assignments":"ENSESTT00000054090 // --- // ensembl_est // 10 // --- /// NM_003557 // Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, alpha (PIP5K1A), mRNA. // refseq // 10 // --- /// ENST00000349792 // cdna:known-ccds chromosome:NCBI36:1:149437651:149488636:1 gene:ENSG00000143398 CCDS990.1 // ensembl_transcript // 10 // --- /// ENST00000368890 // cdna:novel chromosome:NCBI36:1:149437653:149488631:1 gene:ENSG00000143398 // ensembl_transcript // 11 // --- /// ENST00000368889 // cdna:novel chromosome:NCBI36:1:149437653:149488628:1 gene:ENSG00000143398 // ensembl_transcript // 11 // --- /// ENST00000368888 // cdna:known chromosome:NCBI36:1:149437675:149486988:1 gene:ENSG00000143398 // ensembl_transcript // 10 // --- /// ENST00000271665 // cdna:known chromosome:NCBI36:1:149437675:149486988:1 gene:ENSG00000143398 // ensembl_transcript // 10 // --- /// ENST00000355825 // cdna:known chromosome:NCBI36:1:149437696:149488629:1 gene:ENSG00000143398 // ensembl_transcript // 10 // ---","Annotation.Notes":"BC028580 // gb // 3 // Cross Hyb Matching Probes /// XR_000874 // refseq // 4 // Cross Hyb Matching Probes /// XM_938649 // refseq // 4 // Cross Hyb Matching Probes /// GENSCAN00000058378 // ensembl_prediction // 2 // Cross Hyb Matching Probes /// GENSCAN00000048576 // ensembl_prediction // 8 // Cross Hyb Matching Probes /// ENST00000340582 // ensembl_transcript // 3 // Cross Hyb Matching Probes /// ENST00000309390 // ensembl_transcript // 3 // Cross Hyb Matching Probes","_row":"10646"}
{"Probe.Set.ID":"204777_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12408666","Target.Description":"gb:NM_002371.2 /DEF=Homo sapiens mal, T-cell differentiation protein (MAL), transcript variant a, mRNA.  /FEA=mRNA /GEN=MAL /PROD=T-cell differentiation protein MAL, isoform a /DB_XREF=gi:12408666 /UG=Hs.80395 mal, T-cell differentiation protein /FL=gb:NM_002371.2 gb:BC000458.1 gb:BC003006.1 gb:M15800.1","Representative.Public.ID":"NM_002371","Archival.UniGene.Cluster":"Hs.80395","UniGene.ID":"Hs.80395","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:95055205-95083462 (+) // 100.0 // q11.1","Gene.Title":"mal, T-cell differentiation protein","Gene.Symbol":"MAL","Chromosomal.Location":"chr2cen-q13","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000172005","Entrez.Gene":"4118","SwissProt":"P21145 /// Q6FH77","EC":"---","OMIM":"188860","RefSeq.Protein.ID":"NP_002362.1 /// NP_071883.1 /// NP_071884.1 /// NP_071885.1","RefSeq.Transcript.ID":"NM_002371 /// NM_022438 /// NM_022439 /// NM_022440","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"1766 // lipid raft polarization // traceable author statement /// 6917 // induction of apoptosis // non-traceable author statement /// 7165 // signal transduction // traceable author statement /// 7417 // central nervous system development // traceable author statement /// 7516 // hemocyte development (sensu Arthropoda) // traceable author statement /// 30154 // cell differentiation // traceable author statement /// 42552 // myelination // non-traceable author statement /// 42552 // myelination // traceable author statement /// 45176 // apical protein localization // traceable author statement","Gene.Ontology.Cellular.Component":"5624 // membrane fraction // traceable author statement /// 5626 // insoluble fraction // traceable author statement /// 5768 // endosome // traceable author statement /// 5783 // endoplasmic reticulum // inferred from direct assay /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16324 // apical plasma membrane // traceable author statement /// 45121 // lipid raft // inferred from direct assay /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"8289 // lipid binding // traceable author statement /// 15267 // channel or pore class transporter activity // traceable author statement /// 16505 // apoptotic protease activator activity // non-traceable author statement /// 19911 // structural constituent of myelin sheath // inferred from direct assay","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR008253 // Marvel // 3.2E-38 /// IPR008253 // Marvel // 9.3E-16 /// IPR008253 // Marvel // 9.3E-16","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_002371(11),NM_022438(11),NM_022439(11),NM_022440(11)","Transcript.Assignments":"AK123269 // Homo sapiens cDNA FLJ41275 fis, clone BRAMY2036699. // gb // 11 // --- /// NM_002371 // Homo sapiens mal, T-cell differentiation protein (MAL), transcript variant a, mRNA. // refseq // 11 // --- /// NM_022440 // Homo sapiens mal, T-cell differentiation protein (MAL), transcript variant d, mRNA. // refseq // 11 // --- /// NM_022439 // Homo sapiens mal, T-cell differentiation protein (MAL), transcript variant c, mRNA. // refseq // 11 // --- /// NM_022438 // Homo sapiens mal, T-cell differentiation protein (MAL), transcript variant b, mRNA. // refseq // 11 // --- /// ENST00000309988 // cdna:known-ccds chromosome:NCBI36:2:95055156:95083462:1 gene:ENSG00000172005 CCDS2006.1 // ensembl_transcript // 11 // --- /// ENST00000353004 // cdna:known-ccds chromosome:NCBI36:2:95055156:95083462:1 gene:ENSG00000172005 CCDS2007.1 // ensembl_transcript // 11 // --- /// ENST00000354078 // cdna:known-ccds chromosome:NCBI36:2:95055156:95083462:1 gene:ENSG00000172005 CCDS2008.1 // ensembl_transcript // 11 // --- /// ENST00000349807 // cdna:known-ccds chromosome:NCBI36:2:95055156:95083462:1 gene:ENSG00000172005 CCDS2009.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000076969 // ensembl_est // 5 // Cross Hyb Matching Probes","_row":"4304"}
{"Probe.Set.ID":"201840_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g5453759","Target.Description":"gb:NM_006156.1 /DEF=Homo sapiens neural precursor cell expressed, developmentally down-regulated 8 (NEDD8), mRNA.  /FEA=mRNA /GEN=NEDD8 /PROD=neural precursor cell expressed, developmentallydown-regulated 8 /DB_XREF=gi:5453759 /UG=Hs.75512 neural precursor cell expressed, developmentally down-regulated 8 /FL=gb:D23662.1 gb:NM_006156.1","Representative.Public.ID":"NM_006156","Archival.UniGene.Cluster":"Hs.75512","UniGene.ID":"Hs.531064","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr1:84482540-84483109 (+) // 89.92 // p31.1 /// chr14:23755911-23771412 (-) // 100.0 // q12","Gene.Title":"neural precursor cell expressed, developmentally down-regulated 8","Gene.Symbol":"NEDD8","Chromosomal.Location":"chr14q12","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000129559","Entrez.Gene":"4738","SwissProt":"Q15843 /// Q3SXN8","EC":"---","OMIM":"603171","RefSeq.Protein.ID":"NP_006147.1","RefSeq.Transcript.ID":"NM_006156","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"6508 // proteolysis // traceable author statement /// 6511 // ubiquitin-dependent protein catabolism // traceable author statement /// 6512 // ubiquitin cycle // inferred from electronic annotation /// 9653 // morphogenesis // traceable author statement /// 6464 // protein modification // inferred from electronic annotation /// 6464 // protein modification // traceable author statement","Gene.Ontology.Cellular.Component":"5634 // nucleus // traceable author statement /// 5634 // nucleus // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"4840 // ubiquitin conjugating enzyme activity // not recorded","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000626 // Ubiquitin // 2.2E-32","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_006156(11)","Transcript.Assignments":"ENSESTT00000060034 // --- // ensembl_est // 9 // --- /// NM_006156 // Homo sapiens neural precursor cell expressed, developmentally down-regulated 8 (NEDD8), mRNA. // refseq // 11 // --- /// ENST00000250495 // cdna:known-ccds chromosome:NCBI36:14:23755912:23771412:-1 gene:ENSG00000129559 CCDS9621.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000060035 // ensembl_est // 5 // Cross Hyb Matching Probes /// ENSESTT00000060036 // ensembl_est // 6 // Cross Hyb Matching Probes /// ENSESTT00000060037 // ensembl_est // 8 // Cross Hyb Matching Probes /// ENSESTT00000060038 // ensembl_est // 8 // Cross Hyb Matching Probes /// BC038290 // gb // 8 // Cross Hyb Matching Probes /// BC064899 // gb // 3 // Cross Hyb Matching Probes /// XM_936308 // refseq // 4 // Cross Hyb Matching Probes /// XM_929535 // refseq // 4 // Cross Hyb Matching Probes /// ENST00000361868 // ensembl_transcript // 3 // Cross Hyb Matching Probes","_row":"1368"}
{"Probe.Set.ID":"209516_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g1245371","Target.Description":"gb:U50383.1 /DEF=Human retinoic acid-responsive protein (NN8-4AG) mRNA, complete cds.  /FEA=mRNA /GEN=NN8-4AG /PROD=NN8-4AG /DB_XREF=gi:1245371 /UG=Hs.54413 retinoic acid responsive /FL=gb:U50383.1","Representative.Public.ID":"U50383","Archival.UniGene.Cluster":"Hs.54413","UniGene.ID":"Hs.631882","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr2:73294920-73307856 (+) // 98.21 // p13.2","Gene.Title":"SMYD family member 5","Gene.Symbol":"SMYD5","Chromosomal.Location":"chr2p13.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000135632","Entrez.Gene":"10322","SwissProt":"Q6GMV2","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_006053.1","RefSeq.Transcript.ID":"NM_006062","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR001214 // Nuclear protein SET // 1.1E-6 /// IPR001214 // Nuclear protein SET // 1.1E-6","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"BC009484(11),NM_006062(11)","Transcript.Assignments":"BC009484 // Homo sapiens SMYD family member 5, mRNA (cDNA clone IMAGE:3838181), partial cds. // gb // 11 // --- /// NM_006062 // Homo sapiens SMYD family member 5 (SMYD5), mRNA. // refseq // 11 // --- /// ENST00000258100 // cdna:known chromosome:NCBI36:2:73294898:73307863:1 gene:ENSG00000135632 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"9009"}
{"Probe.Set.ID":"218268_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g12232450","Target.Description":"gb:NM_022771.1 /DEF=Homo sapiens hypothetical protein FLJ12085 (FLJ12085), mRNA. /FEA=mRNA /GEN=FLJ12085 /PROD=hypothetical protein FLJ12085 /DB_XREF=gi:12232450 /UG=Hs.48827 hypothetical protein FLJ12085 /FL=gb:NM_022771.1","Representative.Public.ID":"NM_022771","Archival.UniGene.Cluster":"Hs.48827","UniGene.ID":"Hs.284630","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr12:70519805-70603692 (+) // 99.04 // q21.1","Gene.Title":"TBC1 domain family, member 15","Gene.Symbol":"TBC1D15","Chromosomal.Location":"chr12q21.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000121749","Entrez.Gene":"64786","SwissProt":"Q8TC07 /// Q9HA83 /// Q9NSR4","EC":"---","OMIM":"---","RefSeq.Protein.ID":"NP_073608.2","RefSeq.Transcript.ID":"NM_022771","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"5096 // GTPase activator activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR000195 // RabGAP/TBC domain // 5.5E-10","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_022771(11)","Transcript.Assignments":"AK090510 // Homo sapiens cDNA FLJ33191 fis, clone ADRGL2005336. // gb // 11 // --- /// NM_022771 // Homo sapiens TBC1 domain family, member 15 (TBC1D15), mRNA. // refseq // 11 // --- /// ENST00000319106 // cdna:known chromosome:NCBI36:12:70519806:70604364:1 gene:ENSG00000121749 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000085596 // ensembl_est // 7 // Cross Hyb Matching Probes","_row":"17633"}
{"Probe.Set.ID":"219714_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g8923764","Target.Description":"gb:NM_018398.1 /DEF=Homo sapiens calcium channel alpha2-delta3 subunit (HSA272268), mRNA.  /FEA=mRNA /GEN=HSA272268 /PROD=calcium channel alpha2-delta3 subunit /DB_XREF=gi:8923764 /UG=Hs.22958 calcium channel, voltage-dependent, alpha 2delta 3 subunit /FL=gb:NM_018398.1","Representative.Public.ID":"NM_018398","Archival.UniGene.Cluster":"Hs.22958","UniGene.ID":"Hs.128594","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr3:54132527-55083622 (+) // 99.46 // p21.1","Gene.Title":"calcium channel, voltage-dependent, alpha 2/delta 3 subunit","Gene.Symbol":"CACNA2D3","Chromosomal.Location":"chr3p21.1","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000157445","Entrez.Gene":"55799","SwissProt":"Q1W209 /// Q8IZS8 /// Q9NY16 /// Q9NY18","EC":"---","OMIM":"606399","RefSeq.Protein.ID":"NP_060868.2","RefSeq.Transcript.ID":"NM_018398","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"16020 // membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"---","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"IPR002035 // von Willebrand factor, type A // 9.1E-20 /// IPR004010 // Cache domain // 3.1E-37 /// IPR004010 // Cache domain // 8.4 /// IPR004010 // Cache domain // 2.8E-37","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_018398(10)","Transcript.Assignments":"NM_018398 // Homo sapiens calcium channel, voltage-dependent, alpha 2/delta 3 subunit (CACNA2D3), mRNA. // refseq // 10 // --- /// ENST00000288197 // cdna:known chromosome:NCBI36:3:54131733:55083622:1 gene:ENSG00000157445 // ensembl_transcript // 10 // ---","Annotation.Notes":"---","_row":"19078"}
{"Probe.Set.ID":"212241_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.6283.0","Target.Description":"Consensus includes gb:AI632774 /FEA=EST /DB_XREF=gi:4684104 /DB_XREF=est:wa35a11.x1 /CLONE=IMAGE:2300060 /UG=Hs.6283 DKFZP586F1918 protein","Representative.Public.ID":"AI632774","Archival.UniGene.Cluster":"Hs.6283","UniGene.ID":"Hs.567849","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:55786202-55796988 (+) // 70.05 // q21.3 /// chr4:68586728-68590833 (+) // 70.83 // q13.2","Gene.Title":"glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A /// GRINL1A combined protein /// similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1","Gene.Symbol":"GRINL1A /// Gcom1 /// LOC339970","Chromosomal.Location":"chr15q22.1 /// chr15q21.3 /// chr4q13.2","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000137878","Entrez.Gene":"145781 /// 339970 /// 81488","SwissProt":"Q53ER8 /// Q6EER8 /// Q6EER9 /// Q6EES2 /// Q6EES4 /// Q6EEV3 /// Q6EEV4 /// Q6EEV7 /// Q6EF00 /// Q6EF01 /// Q6EF02 /// Q6EF46 /// Q6EFN8 /// Q6EM48 /// Q6K046 /// Q6K050 /// Q6K051 /// Q6ZQZ3 /// Q8NCF3 /// Q96JB7 /// Q96NF5 /// Q9Y3V6","EC":"---","OMIM":"606485","RefSeq.Protein.ID":"NP_001018100.1 /// NP_001018101.1 /// NP_001018102.1 /// NP_001018103.1 /// NP_001018104.1 /// NP_001018105.1 /// NP_001018106.1 /// NP_001018107.1 /// NP_001018108.1 /// NP_001018109.1 /// NP_001018110.1 /// NP_001018111.1 /// NP_001018112.1 /// NP_001018113.1 /// NP_056347.1 /// NP_689664.2 /// XP_291095.3 /// XP_931783.1 /// XP_936594.1 /// XP_936601.1 /// XP_942742.1 /// XP_948483.1 /// XP_948484.1 /// XP_948485.1","RefSeq.Transcript.ID":"NM_001018090 /// NM_001018091 /// NM_001018092 /// NM_001018093 /// NM_001018094 /// NM_001018095 /// NM_001018096 /// NM_001018097 /// NM_001018098 /// NM_001018099 /// NM_001018100 /// NM_001018101 /// NM_001018102 /// NM_001018103 /// NM_015532 /// NM_152451 /// XM_291095 /// XM_926690 /// XM_931501 /// XM_931508 /// XM_937649 /// XM_943390 /// XM_943391 /// XM_943392","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 18 transcripts. // true // Matching Probes // A","Annotation.Transcript.Cluster":"CR600323(11),AY207007(10),AY350748(10),NM_001018094(11),NM_001018090(11),NM_001018092(11),NM_001018093(11),NM_001018098(11),NM_001018097(11),XM_937649(9),XM_943390(9),XM_943391(9),XM_943392(9),NM_015532(11),NM_001018102(11),XM_926690(9),XM_931501(9),XM_291095(9),XM_931508(9),GENSCAN00000016240(9),ENST00000380569(11),ENST00000380568(11),ENST00000299638(11)","Transcript.Assignments":"CR600323 // full-length cDNA clone CS0DJ011YG12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human). // gb // 11 // --- /// AY207007 // Homo sapiens GRINL1A complex protein 1 Gcom1 precursor (GRINL1A) mRNA, complete cds, alternatively spliced. // gb // 10 // --- /// AY350748 // Homo sapiens GRINL1A combined protein Gcom12 precursor (GRINL1A) mRNA, partial cds, alternatively spliced. // gb // 10 // --- /// NM_001018094 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 5, mRNA. // refseq // 11 // --- /// NM_001018090 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001018092 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_001018093 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 4, mRNA. // refseq // 11 // --- /// NM_001018098 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 10, mRNA. // refseq // 11 // --- /// NM_001018097 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 9, mRNA. // refseq // 11 // --- /// XM_937649 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 1 (LOC647770), mRNA. // refseq // 9 // --- /// XM_943390 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 2 (LOC647770), mRNA. // refseq // 9 // --- /// XM_943391 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 3 (LOC647770), mRNA. // refseq // 9 // --- /// XM_943392 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 4 (LOC647770), mRNA. // refseq // 9 // --- /// NM_015532 // Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (GRINL1A), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001018102 // Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (GRINL1A), transcript variant 2, mRNA. // refseq // 11 // --- /// XM_926690 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 2 (LOC339970), mRNA. // refseq // 9 // --- /// XM_931501 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 3 (LOC339970), mRNA. // refseq // 9 // --- /// XM_291095 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 1 (LOC339970), mRNA. // refseq // 9 // --- /// XM_931508 // PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 1, transcript variant 4 (LOC339970), mRNA. // refseq // 9 // --- /// GENSCAN00000016240 // cdna:Genscan chromosome:NCBI36:15:55786218:55794169:1 // ensembl_prediction // 9 // --- /// ENST00000380569 // cdna:known chromosome:NCBI36:15:55671406:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // --- /// ENST00000380568 // cdna:known chromosome:NCBI36:15:55671406:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // --- /// ENST00000299638 // cdna:known chromosome:NCBI36:15:55786193:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // ---","Annotation.Notes":"ENSESTT00000047627 // ensembl_est // 8 // Cross Hyb Matching Probes /// AK074767 // gb // 7 // Cross Hyb Matching Probes /// NM_001018091 // refseq // 4 // Cross Hyb Matching Probes /// GENSCAN00000058650 // ensembl_prediction // 8 // Cross Hyb Matching Probes /// ENST00000380557 // ensembl_transcript // 7 // Cross Hyb Matching Probes /// ENST00000320037 // ensembl_transcript // 8 // Cross Hyb Matching Probes","_row":"11627"}
{"Probe.Set.ID":"212243_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.6283.0","Target.Description":"Consensus includes gb:BE645501 /FEA=EST /DB_XREF=gi:9969812 /DB_XREF=est:7e71d06.x1 /CLONE=IMAGE:3287915 /UG=Hs.6283 DKFZP586F1918 protein","Representative.Public.ID":"BE645501","Archival.UniGene.Cluster":"Hs.6283","UniGene.ID":"Hs.437256","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:55786202-55796988 (+) // 70.05 // q21.3 /// chr4:68586728-68590833 (+) // 70.83 // q13.2","Gene.Title":"glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A /// GRINL1A combined protein","Gene.Symbol":"GRINL1A /// Gcom1","Chromosomal.Location":"chr15q22.1 /// chr15q21.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000137878","Entrez.Gene":"145781 /// 81488","SwissProt":"Q53ER8 /// Q6EER8 /// Q6EER9 /// Q6EES2 /// Q6EES4 /// Q6EEV3 /// Q6EEV4 /// Q6EEV7 /// Q6EF00 /// Q6EF01 /// Q6EF02 /// Q6EF46 /// Q6EFN8 /// Q6EM48 /// Q6K046 /// Q6K050 /// Q6K051 /// Q6ZQZ3 /// Q8NCF3 /// Q96JB7 /// Q96NF5 /// Q9Y3V6","EC":"---","OMIM":"606485","RefSeq.Protein.ID":"NP_001018100.1 /// NP_001018101.1 /// NP_001018102.1 /// NP_001018103.1 /// NP_001018104.1 /// NP_001018105.1 /// NP_001018106.1 /// NP_001018107.1 /// NP_001018108.1 /// NP_001018109.1 /// NP_001018110.1 /// NP_001018111.1 /// NP_001018112.1 /// NP_001018113.1 /// NP_056347.1 /// NP_689664.2","RefSeq.Transcript.ID":"NM_001018090 /// NM_001018091 /// NM_001018092 /// NM_001018093 /// NM_001018094 /// NM_001018095 /// NM_001018096 /// NM_001018097 /// NM_001018098 /// NM_001018099 /// NM_001018100 /// NM_001018101 /// NM_001018102 /// NM_001018103 /// NM_015532 /// NM_152451","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 9 transcripts. // true // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001018091(11),NM_001018094(11),NM_001018090(11),NM_001018092(11),NM_001018093(11),NM_001018098(11),NM_001018097(11),NM_015532(11),NM_001018102(11),ENST00000380569(11),ENST00000380568(11),ENST00000299638(11)","Transcript.Assignments":"NM_001018091 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_001018094 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 5, mRNA. // refseq // 11 // --- /// NM_001018090 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001018092 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_001018093 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 4, mRNA. // refseq // 11 // --- /// NM_001018098 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 10, mRNA. // refseq // 11 // --- /// NM_001018097 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 9, mRNA. // refseq // 11 // --- /// NM_015532 // Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (GRINL1A), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001018102 // Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (GRINL1A), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000380569 // cdna:known chromosome:NCBI36:15:55671406:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // --- /// ENST00000380568 // cdna:known chromosome:NCBI36:15:55671406:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // --- /// ENST00000299638 // cdna:known chromosome:NCBI36:15:55786193:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // ---","Annotation.Notes":"XM_943390 // refseq // 7 // Cross Hyb Matching Probes /// XM_943391 // refseq // 7 // Cross Hyb Matching Probes /// XM_943392 // refseq // 7 // Cross Hyb Matching Probes /// XM_931501 // refseq // 7 // Cross Hyb Matching Probes /// XM_291095 // refseq // 7 // Cross Hyb Matching Probes /// XM_931508 // refseq // 7 // Cross Hyb Matching Probes","_row":"11629"}
{"Probe.Set.ID":"212244_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.6283.0","Target.Description":"Consensus includes gb:AL050091.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586F1918 (from clone DKFZp586F1918); partial cds.  /FEA=mRNA /GEN=DKFZp586F1918 /PROD=hypothetical protein /DB_XREF=gi:4884111 /UG=Hs.6283 DKFZP586F1918 protein","Representative.Public.ID":"AL050091","Archival.UniGene.Cluster":"Hs.6283","UniGene.ID":"Hs.437256","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr15:55786202-55796988 (+) // 70.05 // q21.3 /// chr4:68586728-68590833 (+) // 70.83 // q13.2","Gene.Title":"glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A /// GRINL1A combined protein","Gene.Symbol":"GRINL1A /// Gcom1","Chromosomal.Location":"chr15q22.1 /// chr15q21.3","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000137878","Entrez.Gene":"145781 /// 81488","SwissProt":"Q53ER8 /// Q6EER8 /// Q6EER9 /// Q6EES2 /// Q6EES4 /// Q6EEV3 /// Q6EEV4 /// Q6EEV7 /// Q6EF00 /// Q6EF01 /// Q6EF02 /// Q6EF46 /// Q6EFN8 /// Q6EM48 /// Q6K046 /// Q6K050 /// Q6K051 /// Q6ZQZ3 /// Q8NCF3 /// Q96JB7 /// Q96NF5 /// Q9Y3V6","EC":"---","OMIM":"606485","RefSeq.Protein.ID":"NP_001018100.1 /// NP_001018101.1 /// NP_001018102.1 /// NP_001018103.1 /// NP_001018104.1 /// NP_001018105.1 /// NP_001018106.1 /// NP_001018107.1 /// NP_001018108.1 /// NP_001018109.1 /// NP_001018110.1 /// NP_001018111.1 /// NP_001018112.1 /// NP_001018113.1 /// NP_056347.1 /// NP_689664.2","RefSeq.Transcript.ID":"NM_001018090 /// NM_001018091 /// NM_001018092 /// NM_001018093 /// NM_001018094 /// NM_001018095 /// NM_001018096 /// NM_001018097 /// NM_001018098 /// NM_001018099 /// NM_001018100 /// NM_001018101 /// NM_001018102 /// NM_001018103 /// NM_015532 /// NM_152451","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"---","Gene.Ontology.Cellular.Component":"---","Gene.Ontology.Molecular.Function":"4872 // receptor activity // inferred from electronic annotation","Pathway":"---","Protein.Families":"---","Protein.Domains":"---","InterPro":"---","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 9 transcripts. // true // Matching Probes // A","Annotation.Transcript.Cluster":"NM_001018091(11),NM_001018094(11),NM_001018090(11),NM_001018092(11),NM_001018093(11),NM_001018098(11),NM_001018097(11),NM_015532(11),NM_001018102(11),ENST00000380569(11),ENST00000380568(11),ENST00000299638(11)","Transcript.Assignments":"NM_001018091 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 2, mRNA. // refseq // 11 // --- /// NM_001018094 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 5, mRNA. // refseq // 11 // --- /// NM_001018090 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001018092 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_001018093 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 4, mRNA. // refseq // 11 // --- /// NM_001018098 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 10, mRNA. // refseq // 11 // --- /// NM_001018097 // Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 9, mRNA. // refseq // 11 // --- /// NM_015532 // Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (GRINL1A), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_001018102 // Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (GRINL1A), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000380569 // cdna:known chromosome:NCBI36:15:55671406:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // --- /// ENST00000380568 // cdna:known chromosome:NCBI36:15:55671406:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // --- /// ENST00000299638 // cdna:known chromosome:NCBI36:15:55786193:55797044:1 gene:ENSG00000137878 // ensembl_transcript // 11 // ---","Annotation.Notes":"XM_943390 // refseq // 4 // Cross Hyb Matching Probes /// XM_943391 // refseq // 6 // Cross Hyb Matching Probes /// XM_943392 // refseq // 6 // Cross Hyb Matching Probes /// XM_931501 // refseq // 4 // Cross Hyb Matching Probes /// XM_291095 // refseq // 6 // Cross Hyb Matching Probes /// XM_931508 // refseq // 6 // Cross Hyb Matching Probes","_row":"11630"}
{"Probe.Set.ID":"206590_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g4503384","Target.Description":"gb:NM_000795.1 /DEF=Homo sapiens dopamine receptor D2 (DRD2), mRNA. /FEA=mRNA /GEN=DRD2 /PROD=dopamine receptor D2 /DB_XREF=gi:4503384 /UG=Hs.73893 dopamine receptor D2 /FL=gb:M29066.1 gb:NM_000795.1 gb:AF176812.1 gb:NM_016574.1","Representative.Public.ID":"NM_000795","Archival.UniGene.Cluster":"Hs.73893","UniGene.ID":"Hs.73893","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:112785541-112800616 (-) // 99.76 // q23.1","Gene.Title":"dopamine receptor D2","Gene.Symbol":"DRD2","Chromosomal.Location":"chr11q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000149295","Entrez.Gene":"1813","SwissProt":"P14416 /// Q59EH9","EC":"---","OMIM":"126450 /// 159900","RefSeq.Protein.ID":"NP_000786.1 /// NP_057658.2","RefSeq.Transcript.ID":"NM_000795 /// NM_016574","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // traceable author statement /// 7195 // dopamine receptor, adenylate cyclase inhibiting pathway // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 7399 // nervous system development // traceable author statement /// 7165 // signal transduction // inferred from electronic annotation /// 7186 // G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 7212 // dopamine receptor signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5882 // intermediate filament // traceable author statement /// 5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"1584 // rhodopsin-like receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation /// 4872 // receptor activity // inferred from electronic annotation /// 4930 // G-protein coupled receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // inferred from electronic annotation /// 4872 // receptor activity // traceable author statement /// 4888 // transmembrane receptor activity // traceable author statement","Pathway":"GPCRDB_Class_A_Rhodopsin-like // GenMAPP /// Monoamine_GPCRs // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.7E-116 /// --- // --- // 2.5E-116 /// --- // --- // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 2.5E-116","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000795(9),NM_016574(9)","Transcript.Assignments":"NM_000795 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 1, mRNA. // refseq // 9 // --- /// NM_016574 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 2, mRNA. // refseq // 9 // --- /// ENST00000355319 // cdna:known chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 // ensembl_transcript // 9 // --- /// ENST00000362072 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8361.1 // ensembl_transcript // 9 // --- /// ENST00000346454 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8362.1 // ensembl_transcript // 9 // ---","Annotation.Notes":"S62137 // gb // 3 // Cross Hyb Matching Probes","_row":"6116"}
{"Probe.Set.ID":"211624_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Exemplar sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"g181431","Target.Description":"gb:M30625.1 /DEF=Human dopamine D2 receptor, mRNA, complete cds. /FEA=mRNA /GEN=DRD2 /PROD=dopamine D2 receptor; unknown protein /DB_XREF=gi:181431 /FL=gb:M30625.1","Representative.Public.ID":"M30625","Archival.UniGene.Cluster":"--- /// Hs.900367","UniGene.ID":"Hs.73893","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:112786570-112851321 (-) // 93.79 // q23.1","Gene.Title":"dopamine receptor D2 /// dopamine receptor D2","Gene.Symbol":"DRD2","Chromosomal.Location":"chr11q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000149295","Entrez.Gene":"1813","SwissProt":"P14416 /// Q59EH9","EC":"---","OMIM":"126450 /// 159900","RefSeq.Protein.ID":"NP_000786.1 /// NP_057658.2","RefSeq.Transcript.ID":"NM_000795 /// NM_016574","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // traceable author statement /// 7195 // dopamine receptor, adenylate cyclase inhibiting pathway // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 7399 // nervous system development // traceable author statement /// 7165 // signal transduction // inferred from electronic annotation /// 7186 // G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 7212 // dopamine receptor signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5882 // intermediate filament // traceable author statement /// 5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"1584 // rhodopsin-like receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation /// 4872 // receptor activity // inferred from electronic annotation /// 4930 // G-protein coupled receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // inferred from electronic annotation /// 4872 // receptor activity // traceable author statement /// 4888 // transmembrane receptor activity // traceable author statement","Pathway":"GPCRDB_Class_A_Rhodopsin-like // GenMAPP /// Monoamine_GPCRs // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.7E-116 /// --- // --- // 2.5E-116 /// --- // --- // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 2.5E-116 /// IPR007087 // Zn-finger, C2H2 type // 3.7E-5 /// IPR007087 // Zn-finger, C2H2 type // 8.6E-7 /// IPR007087 // Zn-finger, C2H2 type // 9.7E-7 /// IPR007087 // Zn-finger, C2H2 type // 2.9E-6 /// IPR007087 // Zn-finger, C2H2 type // 1.2E-6 /// IPR007087 // Zn-finger, C2H2 type // 4.0E-6 /// IPR007087 // Zn-finger, C2H2 type // 2.2E-7 /// IPR007087 // Zn-finger, C2H2 type // 1.2E-6","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"M30625(11),NM_000795(11),NM_016574(11),S62137(11)","Transcript.Assignments":"M30625 // Human dopamine D2 receptor, mRNA, complete cds. // gb // 11 // --- /// S62137 // D2 dopamine receptor [human, mRNA, 2460 nt]. // gb // 11 // --- /// NM_000795 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_016574 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 2, mRNA. // refseq // 11 // --- /// GENSCAN00000022724 // cdna:Genscan chromosome:NCBI36:11:112786659:112816342:-1 // ensembl_prediction // 11 // --- /// ENST00000355319 // cdna:known chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 // ensembl_transcript // 11 // --- /// ENST00000362072 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8361.1 // ensembl_transcript // 11 // --- /// ENST00000346454 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8362.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"11029"}
{"Probe.Set.ID":"216924_s_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.73893.1","Target.Description":"Consensus includes gb:S62137.1 /DEF=D2 dopamine receptor human, mRNA, 2460 nt. /FEA=mRNA /GEN=D2 dopamine receptor /PROD=D2 dopamine receptor /DB_XREF=gi:405309 /UG=Hs.73893 dopamine receptor D2","Representative.Public.ID":"S62137","Archival.UniGene.Cluster":"Hs.73893","UniGene.ID":"Hs.73893","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:112785844-112800882 (-) // 98.21 // q23.1","Gene.Title":"dopamine receptor D2","Gene.Symbol":"DRD2","Chromosomal.Location":"chr11q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000149295","Entrez.Gene":"1813","SwissProt":"P14416 /// Q59EH9","EC":"---","OMIM":"126450 /// 159900","RefSeq.Protein.ID":"NP_000786.1 /// NP_057658.2","RefSeq.Transcript.ID":"NM_000795 /// NM_016574","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // traceable author statement /// 7195 // dopamine receptor, adenylate cyclase inhibiting pathway // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 7399 // nervous system development // traceable author statement /// 7165 // signal transduction // inferred from electronic annotation /// 7186 // G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 7212 // dopamine receptor signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5882 // intermediate filament // traceable author statement /// 5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"1584 // rhodopsin-like receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation /// 4872 // receptor activity // inferred from electronic annotation /// 4930 // G-protein coupled receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // inferred from electronic annotation /// 4872 // receptor activity // traceable author statement /// 4888 // transmembrane receptor activity // traceable author statement","Pathway":"GPCRDB_Class_A_Rhodopsin-like // GenMAPP /// Monoamine_GPCRs // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.7E-116 /// --- // --- // 2.5E-116 /// --- // --- // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 2.5E-116","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000795(11),NM_016574(11),S62137(11)","Transcript.Assignments":"S62137 // D2 dopamine receptor [human, mRNA, 2460 nt]. // gb // 11 // --- /// NM_000795 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_016574 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 2, mRNA. // refseq // 11 // --- /// ENST00000355319 // cdna:known chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 // ensembl_transcript // 11 // --- /// ENST00000362072 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8361.1 // ensembl_transcript // 11 // --- /// ENST00000346454 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8362.1 // ensembl_transcript // 11 // ---","Annotation.Notes":"---","_row":"16294"}
{"Probe.Set.ID":"216938_x_at","GeneChip.Array":"Human Genome U133A Array","Species.Scientific.Name":"Homo sapiens","Annotation.Date":"Jul 12, 2006","Sequence.Type":"Consensus sequence","Sequence.Source":"GenBank","Transcript.ID.Array.Design.":"Hs.73893.2","Target.Description":"Consensus includes gb:S69899.1 /DEF=D2 dopamine receptor human, retina, mRNA, 2474 nt. /FEA=mRNA /GEN=D2 dopamine receptor /PROD=D2 dopamine receptor /DB_XREF=gi:240290 /UG=Hs.73893 dopamine receptor D2","Representative.Public.ID":"S69899","Archival.UniGene.Cluster":"Hs.73893","UniGene.ID":"Hs.73893","Genome.Version":"March 2006 (NCBI Build 36.1)","Alignments":"chr11:112785546-112851073 (-) // 98.1 // q23.1","Gene.Title":"dopamine receptor D2","Gene.Symbol":"DRD2","Chromosomal.Location":"chr11q23","Unigene.Cluster.Type":"full length","Ensembl":"ENSG00000149295","Entrez.Gene":"1813","SwissProt":"P14416 /// Q59EH9","EC":"---","OMIM":"126450 /// 159900","RefSeq.Protein.ID":"NP_000786.1 /// NP_057658.2","RefSeq.Transcript.ID":"NM_000795 /// NM_016574","FlyBase":"---","AGI":"---","WormBase":"---","MGI.Name":"---","RGD.Name":"---","SGD.accession.number":"---","Gene.Ontology.Biological.Process":"7165 // signal transduction // traceable author statement /// 7195 // dopamine receptor, adenylate cyclase inhibiting pathway // traceable author statement /// 7268 // synaptic transmission // traceable author statement /// 7399 // nervous system development // traceable author statement /// 7165 // signal transduction // inferred from electronic annotation /// 7186 // G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 7212 // dopamine receptor signaling pathway // traceable author statement","Gene.Ontology.Cellular.Component":"5882 // intermediate filament // traceable author statement /// 5886 // plasma membrane // traceable author statement /// 5887 // integral to plasma membrane // traceable author statement /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation","Gene.Ontology.Molecular.Function":"1584 // rhodopsin-like receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // traceable author statement /// 4871 // signal transducer activity // inferred from electronic annotation /// 4872 // receptor activity // inferred from electronic annotation /// 4930 // G-protein coupled receptor activity // inferred from electronic annotation /// 4952 // dopamine receptor activity // inferred from electronic annotation /// 4872 // receptor activity // traceable author statement /// 4888 // transmembrane receptor activity // traceable author statement","Pathway":"GPCRDB_Class_A_Rhodopsin-like // GenMAPP /// Monoamine_GPCRs // GenMAPP","Protein.Families":"---","Protein.Domains":"---","InterPro":"--- // --- // 2.7E-116 /// --- // --- // 2.5E-116 /// --- // --- // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 6.0E-117 /// IPR000276 // Rhodopsin-like GPCR superfamily // 2.5E-116","Trans.Membrane":"---","QTL":"---","Annotation.Description":"This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A","Annotation.Transcript.Cluster":"NM_000795(9),NM_016574(9)","Transcript.Assignments":"NM_000795 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 1, mRNA. // refseq // 9 // --- /// NM_016574 // Homo sapiens dopamine receptor D2 (DRD2), transcript variant 2, mRNA. // refseq // 9 // --- /// ENST00000355319 // cdna:known chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 // ensembl_transcript // 9 // --- /// ENST00000362072 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8361.1 // ensembl_transcript // 9 // --- /// ENST00000346454 // cdna:known-ccds chromosome:NCBI36:11:112785528:112851103:-1 gene:ENSG00000149295 CCDS8362.1 // ensembl_transcript // 9 // ---","Annotation.Notes":"S62137 // gb // 2 // Cross Hyb Matching Probes","_row":"16308"}