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# CITATION file created with {cffr} R package
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cff-version: 1.2.0
message: 'To cite package "anglemania" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'anglemania: Feature Extraction for scRNA-seq Dataset Integration'
version: 1.3.0
doi: 10.32614/CRAN.package.anglemania
abstract: anglemania extracts genes from multi-batch scRNA-seq experiments for downstream
  dataset integration. It shows improvement over the conventional usage of highly-variable
  genes for many integration tasks. We leverage gene-gene correlations that are stable
  across batches to identify biologically informative genes which are less affected
  by batch effects. Currently, its main use is for single-cell RNA-seq dataset integration,
  but it can be applied for other multi-batch downstream analyses such as NMF.
authors:
- family-names: Kollotzek
  given-names: Aaron
  email: aaron.kollotzek@mdc-berlin.de
  orcid: https://orcid.org/0009-0009-7142-4015
- family-names: Franke
  given-names: Vedran
  email: vedran.franke@mdc-berlin.de
  orcid: https://orcid.org/0000-0003-3606-6792
- family-names: Baranovskii
  given-names: Artem
  email: artem.baranowsky@gmail.com
- family-names: Akalin
  given-names: Altuna
  email: altuna.akalin@mdc-berlin.de
repository: https://bioc.r-universe.dev
repository-code: https://github.com/BIMSBbioinfo/anglemania
commit: 097e32809cb21b2ff78853f19117af4e58db33ed
url: https://github.com/BIMSBbioinfo/anglemania/
date-released: '2026-04-28'
contact:
- family-names: Kollotzek
  given-names: Aaron
  email: aaron.kollotzek@mdc-berlin.de
  orcid: https://orcid.org/0009-0009-7142-4015