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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "airpart" in publications use:'
type: software
license: GPL-2.0-only
title: 'airpart: Differential cell-type-specific allelic imbalance'
version: 1.13.0
doi: 10.1093/bioinformatics/btac212
abstract: Airpart identifies sets of genes displaying differential cell-type-specific
  allelic imbalance across cell types or states, utilizing single-cell allelic counts.
  It makes use of a generalized fused lasso with binomial observations of allelic
  counts to partition cell types by their allelic imbalance. Alternatively, a nonparametric
  method for partitioning cell types is offered. The package includes a number of
  visualizations and quality control functions for examining single cell allelic imbalance
  datasets.
authors:
- family-names: Mu
  given-names: Wancen
  email: wancen@live.unc.edu
  orcid: https://orcid.org/0000-0002-5061-7581
- family-names: Love
  given-names: Michael
  orcid: https://orcid.org/0000-0001-8401-0545
preferred-citation:
  type: article
  title: 'Airpart: Interpretable statistical models for analyzing allelic imbalance
    in single-cell datasets'
  authors:
  - family-names: Mu
    given-names: Wancen
    email: wancen@live.unc.edu
    orcid: https://orcid.org/0000-0002-5061-7581
  - family-names: Sarkar
    given-names: Hirak
  - family-names: Srivastava
    given-names: Avi
  - family-names: Choi
    given-names: Kwangbom
  - family-names: Patro
    given-names: Rob
  - family-names: Love
    given-names: Michael I.
  year: '2022'
  journal: Bioinformatics
  doi: 10.1093/bioinformatics/btac212
repository: https://bioc.r-universe.dev
repository-code: https://github.com/Wancen/airpart
url: https://github.com/Wancen/airpart
contact:
- family-names: Mu
  given-names: Wancen
  email: wancen@live.unc.edu
  orcid: https://orcid.org/0000-0002-5061-7581