NEWS

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ViSEAGO 1.7

• Ensembl2GO() biomart update

ViSEAGO 1.3

• print graph with orca
• Ensembl2GO() biomart update
• show_heatmap() upgrade
• upset print update
• merge_enrich_terms upgrade pvalue cutoff
• merge_enrich_terms globale upgrade
• GOterms_heatmap remove row side colors text and correct showIC column
• vignettes update
• annotate() update for uniprot
• fgsea support

ViSEAGO 1.2

• add gene_symbol field for Custom2GO
• patch for Custom gene_symbols on merge_enrich_terms
• set esummary to 400 terms (instead of 500) by querying on merge_enrich_terms
• add gene frequency hover text on GOterms_heatmap
• add custom heatmap colors on GOterms_heatmap
• showIC print patch on GOterms_heatmap
• GO count update
• Uniprot2GO connection method update
• prevent bioconductor errors when check examples
• annotate upgrade
• merge_enrich_terms upgrade for custom

ViSEAGO 1.0.0

• master branch of Bioconductor

ViSEAGO 0.99.42

• remove environment signature in merge_enrich_terms

ViSEAGO 0.99.41

• keep require("topGO") in create_topGOdata method

ViSEAGO 0.99.40

• add attachNamespace("topGO") instead require("topGO") in create_topGOdata method for prevent build check warnings

ViSEAGO 0.99.39

• check gene background in merge_enrich_terms upgrade

ViSEAGO 0.99.38

• show method for GO_cluster print bug correction

ViSEAGO 0.99.37

• add environment option for merge_enrich_terms

ViSEAGO 0.99.36

• annotate id argument signature with "NULL"

ViSEAGO 0.99.35

• README update

ViSEAGO 0.99.34

• README update (download from Bioconductor and forgeMIA gitlab)
• add require("topGO") in create_topGOdata method

ViSEAGO 0.99.33

• merge_enrich_terms exemple update.

ViSEAGO 0.99.32

• GOterms_heatmap GO.clusters column convert to character in order to prevent data.table merge error.

ViSEAGO 0.99.30

• ViSEAGO citation update