# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "VariantExperiment" in publications use:' type: software license: GPL-3.0-only title: 'VariantExperiment: A RangedSummarizedExperiment Container for VCF/GDS Data with GDS Backend' version: 1.19.2 abstract: VariantExperiment is a Bioconductor package for saving data in VCF/GDS format into RangedSummarizedExperiment object. The high-throughput genetic/genomic data are saved in GDSArray objects. The annotation data for features/samples are saved in DelayedDataFrame format with mono-dimensional GDSArray in each column. The on-disk representation of both assay data and annotation data achieves on-disk reading and processing and saves memory space significantly. The interface of RangedSummarizedExperiment data format enables easy and common manipulations for high-throughput genetic/genomic data with common SummarizedExperiment metaphor in R and Bioconductor. authors: - family-names: Liu given-names: Qian email: Qian.Liu@roswellpark.org - family-names: Pagès given-names: Hervé - family-names: Morgan given-names: Martin repository: https://bioc.r-universe.dev repository-code: https://github.com/Bioconductor/VariantExperiment url: https://github.com/Bioconductor/VariantExperiment contact: - family-names: Liu given-names: Qian email: Qian.Liu@roswellpark.org