Package: Trendy
Type: Package
Title: Breakpoint analysis of time-course expression data
Version: 1.35.0
Author: Rhonda Bacher and Ning Leng
Maintainer: Rhonda Bacher <rbacher@ufl.edu>
Description: Trendy implements segmented (or breakpoint) regression
        models to estimate breakpoints which represent changes in
        expression for each feature/gene in high throughput data with
        ordered conditions.
Depends: R (>= 3.4)
Imports: stats, utils, graphics, grDevices, segmented, gplots,
        parallel, magrittr, BiocParallel, DT, S4Vectors,
        SummarizedExperiment, methods, shiny, shinyFiles
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
Suggests: BiocStyle, knitr, rmarkdown, devtools
VignetteBuilder: knitr
biocViews: TimeCourse, RNASeq, Regression, ImmunoOncology
URL: https://github.com/rhondabacher/Trendy
Config/pak/sysreqs: cmake make libuv1-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:47:11 UTC
RemoteUrl: https://github.com/bioc/Trendy
RemoteRef: HEAD
RemoteSha: 2eb84050b7d2cc488bdbe9fa739a98144e1b6ff2
NeedsCompilation: no
Packaged: 2026-07-04 13:16:44 UTC; root