Package: TreeAndLeaf
Type: Package
Title: Displaying binary trees with focus on dendrogram leaves
Version: 1.25.0
Authors@R: 
    c(person("Milena", "Cardoso", role = c("aut"),
              email = "milenandreuzo@gmail.com"),
      person("Luis", "Rizzardi", role = "aut"),
      person("Leonardo", "Kume", role = "aut"),
      person("Sheyla", "Trefflich", role = "ctb"),
      person("Clarice", "Groeneveld", role = "ctb"),
      person("Mauro", "Castro", role = c("aut", "cre"),
              email = "mauro.a.castro@gmail.com",
              comment = c(ORCID = "0000-0003-4942-8131"))
      )
Depends: R(>= 4.4)
Imports: RedeR(>= 3.6.1), igraph, ape
Suggests: knitr, rmarkdown, BiocStyle, RUnit, BiocGenerics, stringr,
        ggtree, ggplot2, dplyr, dendextend, RColorBrewer
Description: TreeAndLeaf implements a hybrid layout strategy that
        enhances leaf-level visualization in dendrograms. By
        integrating force-directed graph and tree layout algorithms, it
        enables projection of multiple layers of information onto
        graph–tree diagrams.
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 7.3.2
VignetteBuilder: knitr
BugReports: https://github.com/sysbiolab/TreeAndLeaf/issues
URL: https://doi.org/10.1093/bioinformatics/btab819
biocViews: GraphAndNetwork, Network, Visualization, DataRepresentation,
        Software, SystemsBiology
Config/pak/sysreqs: libglpk-dev libxml2-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:51:48 UTC
RemoteUrl: https://github.com/bioc/TreeAndLeaf
RemoteRef: HEAD
RemoteSha: 769dd7d9047429716b6f3d70a834f37914095ba0
NeedsCompilation: no
Packaged: 2026-06-17 07:30:23 UTC; root
Author: Milena Cardoso [aut],
  Luis Rizzardi [aut],
  Leonardo Kume [aut],
  Sheyla Trefflich [ctb],
  Clarice Groeneveld [ctb],
  Mauro Castro [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-4942-8131>)
Maintainer: Mauro Castro <mauro.a.castro@gmail.com>