# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "TitanCNA" in publications use:'
type: software
license: GPL-3.0-only
title: 'TitanCNA: Subclonal copy number and LOH prediction from whole genome sequencing
  of tumours'
version: 1.43.0
abstract: Hidden Markov model to segment and predict regions of subclonal copy number
  alterations (CNA) and loss of heterozygosity (LOH), and estimate cellular prevalence
  of clonal clusters in tumour whole genome sequencing data.
authors:
- family-names: Ha
  given-names: Gavin
  email: gha@fredhutch.org
preferred-citation:
  type: article
  title: 'TITAN: Inference of copy number architectures in clonal cell populations
    from tumour whole genome sequence data.'
  authors:
  - family-names: Ha
    given-names: G.
  - family-names: Roth
    given-names: A.
  - family-names: Khattra
    given-names: A.
  - family-names: Ho
    given-names: J.
  - family-names: Yap
    given-names: D.
  - family-names: Prentice
    given-names: L.M.
  - family-names: Melnyk
    given-names: N.
  - family-names: McPherson
    given-names: A.
  - family-names: Bashashati
    given-names: A.
  - family-names: Laks
    given-names: E.
  - family-names: Biele
    given-names: J.
  - family-names: Ding
    given-names: J.
  - family-names: Le
    given-names: A.
  - family-names: Rosner
    given-names: J.
  - family-names: Shumansky
    given-names: K.
  - family-names: Marra
    given-names: M.A.
  - family-names: Huntsman
    given-names: D.G.
  - family-names: Aparicio
    given-names: S.A.J.R.
  - family-names: Shah
    given-names: S.P.
  journal: Genome Research
  volume: '24'
  issue: '11'
  year: '2014'
  start: 1881-1893
repository: https://bioc.r-universe.dev
repository-code: https://github.com/gavinha/TitanCNA
url: https://github.com/gavinha/TitanCNA
date-released: '2019-10-03'
contact:
- family-names: Ha
  given-names: Gavin
  email: gha@fredhutch.org