To cite package ‘TRONCO’ in publications use:

  Caravagna G, De Sano L, Graudenzi A, Ramazzotti D (2024). _TRONCO:
  TRONCO, an R package for TRanslational ONCOlogy_. R package version
  2.37.1, <https://bioconductor.org/packages/TRONCO>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {TRONCO: TRONCO, an R package for TRanslational ONCOlogy},
    author = {Giulio Caravagna and Luca {De Sano} and Alex Graudenzi and Daniele Ramazzotti},
    year = {2024},
    note = {R package version 2.37.1},
    url = {https://bioconductor.org/packages/TRONCO},
  }