NEWS

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TPP2D 1.5.5

• new visualization options
• volcanoplot: 'plot2dTppVolcano'
• heatmap of fold changes: 'plot2dTppFcHeatmap'

TPP2D 1.4.1 (2020-06-20)

• bug fix in moderated F statistic computation - old version is unneccessarily stringent

TPP2D 1.4.0 (2020-05-01)

• moderated F statistic is computed as default
• 'computeFdr' is now deprecated, use 'getFDR' instead

TPP2D 1.3.0 (2020-04-17)

• Carry-over detection is not used anymore
• Bootstrapping is done based on resampling of alternative model residuals onto null model fits
• 'getFDR' replaces 'computeFdr'
• option to moderate F is now available in function 'getFDR'

TPP2D 1.1.0 (2019-05-06)

• Carry-over detection now works via a LDA model

TPP2D 1.0.0 (2019-05-01)

• Package added to Bioconductor
• Bioc-submission branch merged with master

TPP2D 0.99.0 (2019-03-12)

• Submitted to Bioconductor