To cite package ‘TOAST’ in publications use:

  Ziyi Li, Zhijin Wu, Peng Jin, Hao Wu (2019): Dissecting differential
  signals in high-throughput data from complex tissues.
  Bioinformatics. doi:10.1093/bioinformatics/btz196

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Dissecting differential signals in high-throughput data from complex tissues},
    author = {Ziyi Li and Zhijin Wu and Peng Jin and Hao Wu},
    year = {2019},
    journal = {Bioinformatics},
    volume = {35},
    number = {20},
    pages = {7803},
    year = {2019},
  }

  Ziyi Li, Hao Wu (2019): TOAST: improving reference-free cell
  composition estimation by cross-cell type differential analysis.
  Genome biology 20.1 (2019): 1-17

A BibTeX entry for LaTeX users is

  @Article{,
    title = {TOAST: improving reference-free cell composition estimation by cross-cell type differential analysis},
    author = {Ziyi Li and Hao Wu},
    year = {2019},
    journal = {Genome Biology},
    volume = {20},
    number = {1},
    pages = {18},
    year = {2019},
  }

  Ziyi Li, Zhenxing Guo, Ying Cheng, Peng Jin, Hao Wu (2019): Robust
  partial reference-free cell composition estimation from tissue
  expression.  Bioinformatics. 36.11 (2020): 3431-3438

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Robust partial reference-free cell composition estimation from tissue expression},
    author = {Ziyi Li and Zhenxing Guo and Ying Cheng and Peng Jin and Hao Wu},
    year = {2020},
    journal = {Bioinformatics},
    volume = {36},
    number = {11},
    pages = {6869},
    year = {2020},
  }

  Weiwei Zhang, Hao Wu, Ziyi Li (2020): Complete deconvolution of DNA
  methylation signals from complex tissues: a geometric approach.
  Bioinformatics

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Complete deconvolution of DNA methylation signals from complex tissues: a geometric approach},
    author = {Weiwei Zhang and Hao Wu and Ziyi Li},
    year = {2020},
    journal = {Bioinformatics},
    volume = {37},
    number = {8},
    pages = {-7},
    year = {2020},
  }