Package: SwarnSeq
Type: Package
Title: Differential Expression and Differential Zero Inflation analysis
Version: 0.99.5
Authors@R: c(
    person(
      "Samarendra", "Das",
      email = "samarendra.das@icar.org.in",
      role = c("aut", "cre"),
      comment = c(ORCID = "0000-0002-0263-7027")
    ),
    person(
      "Satyajit", "Chhatoi",
      email = "satyajitchhatoi016@gmail.com",
      role = c("aut")
    ),
    person(
      given = "Indian Council of Agricultural Research",
      role = "fnd"
    ),
    person(
      given = "Science and Engineering Research Board",
      role = "fnd",
      comment = "Core Research Grant (CRG004960)"
  )
  )
Description: This R package performs differential expression and
        differential zero inflation analysis of single-cell RNA-seq
        (scRNA-seq) UMI counts data through adjusting cell capture
        efficiency.
License: GPL-3
Encoding: UTF-8
LazyData: false
Depends: R (>= 4.5.0)
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), BiocStyle
Imports: stats, MASS, edgeR, SingleCellExperiment, SummarizedExperiment
biocViews: Software, SingleCell, RNASeq, DifferentialExpression,
        GeneExpression, StatisticalMethod
URL: https://github.com/nifmd-bbf/SwarnSeq
BugReports: https://github.com/nifmd-bbf/SwarnSeq/issues
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-07-22 13:27:49 UTC
RemoteUrl: https://github.com/bioc/SwarnSeq
RemoteRef: HEAD
RemoteSha: 651b42d4aef04fbe2783c5302edad8c0098bc4c5
NeedsCompilation: no
Packaged: 2026-10-10 17:56:14 UTC; root
Author: Samarendra Das [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-0263-7027>),
  Satyajit Chhatoi [aut],
  Indian Council of Agricultural Research [fnd],
  Science and Engineering Research Board [fnd] (Core Research Grant
    (CRG004960))
Maintainer: Samarendra Das <samarendra.das@icar.org.in>