# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "SummarizedBenchmark" in publications use:' type: software license: GPL-3.0-or-later title: 'SummarizedBenchmark: Classes and methods for performing benchmark comparisons' version: 2.23.0 doi: 10.1093/bioinformatics/bty627 abstract: This package defines the BenchDesign and SummarizedBenchmark classes for building, executing, and evaluating benchmark experiments of computational methods. The SummarizedBenchmark class extends the RangedSummarizedExperiment object, and is designed to provide infrastructure to store and compare the results of applying different methods to a shared data set. This class provides an integrated interface to store metadata such as method parameters and software versions as well as ground truths (when these are available) and evaluation metrics. authors: - family-names: Reyes given-names: Alejandro email: alejandro.reyes.ds@gmail.com orcid: https://orcid.org/0000-0001-8717-6612 - family-names: Kimes given-names: Patrick email: patrick.kimes@gmail.com orcid: https://orcid.org/0000-0001-6819-9077 preferred-citation: type: article title: Reproducible and replicable comparisons using SummarizedBenchmark. authors: - family-names: Kimes given-names: Patrick email: patrick.kimes@gmail.com orcid: https://orcid.org/0000-0001-6819-9077 - family-names: Reyes given-names: Alejandro email: alejandro.reyes.ds@gmail.com orcid: https://orcid.org/0000-0001-8717-6612 year: '2019' journal: Bioinformatics volume: '35' issue: '1' doi: 10.1093/bioinformatics/bty627 start: '137' repository: https://bioc.r-universe.dev repository-code: https://github.com/areyesq89/SummarizedBenchmark url: http://bioconductor.org/packages/SummarizedBenchmark/ contact: - family-names: Kimes given-names: Patrick email: patrick.kimes@gmail.com orcid: https://orcid.org/0000-0001-6819-9077