Totty M (2026). SpotSweeper: spatially-aware quality control for spatial transcriptomics. doi:10.18129/B9.bioc.SpotSweeper. https://github.com/MicTott/SpotSweeper/SpotSweeper - R package version 1.9.0, http://www.bioconductor.org/packages/SpotSweeper.

Totty M, Hicks S, Guo B (2024). “SpotSweeper: spatially-aware quality control for spatial transcriptomics.” bioRxiv. doi:10.1101/2024.06.06.597765. https://doi.org/10.1101/2024.06.06.597765.

Corresponding BibTeX entries:

  @Manual{,
    title = {SpotSweeper: spatially-aware quality control for spatial
      transcriptomics},
    author = {Michael Totty},
    year = {2026},
    url = {http://www.bioconductor.org/packages/SpotSweeper},
    note = {https://github.com/MicTott/SpotSweeper/SpotSweeper - R
      package version 1.9.0},
    doi = {10.18129/B9.bioc.SpotSweeper},
  }

  @Article{,
    title = {SpotSweeper: spatially-aware quality control for spatial
      transcriptomics},
    author = {Michael Totty and Stephanie Hicks and Boyi Guo},
    journal = {bioRxiv},
    year = {2024},
    doi = {10.1101/2024.06.06.597765},
    url = {https://doi.org/10.1101/2024.06.06.597765},
  }